document_redaction / tools /redaction_review.py
seanpedrickcase's picture
Added option for running redact function through CLI (i.e. not going through Gradio UI or API). Test functions for running this through AWS Lambda.
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import gradio as gr
import numpy as np
from typing import List
from gradio_image_annotation import image_annotator
from gradio_image_annotation.image_annotator import AnnotatedImageData
from tools.file_conversion import is_pdf, convert_pdf_to_images
from tools.helper_functions import get_file_path_end, output_folder
from tools.file_redaction import redact_page_with_pymupdf
import json
import pymupdf
from fitz import Document
from PIL import ImageDraw, Image
def decrease_page(number:int):
'''
Decrease page number for review redactions page.
'''
#print("number:", str(number))
if number > 1:
return number - 1, number - 1
else:
return 1, 1
def increase_page(number:int, image_annotator_object:AnnotatedImageData):
'''
Increase page number for review redactions page.
'''
if not image_annotator_object:
return 1, 1
max_pages = len(image_annotator_object)
if number < max_pages:
return number + 1, number + 1
else:
return max_pages, max_pages
def update_zoom(current_zoom_level:int, annotate_current_page:int, decrease:bool=True):
if decrease == False:
if current_zoom_level >= 50:
current_zoom_level -= 10
else:
if current_zoom_level < 100:
current_zoom_level += 10
return current_zoom_level, annotate_current_page
def update_annotator(image_annotator_object:AnnotatedImageData, page_num:int, zoom:int=100):
'''
Update a gradio_image_annotation object with new annotation data
'''
zoom_str = str(zoom) + '%'
if not image_annotator_object:
out_image_annotator = image_annotator(
label="Modify redaction boxes",
#label_list=["Redaction"],
#label_colors=[(0, 0, 0)],
height=zoom_str,
width=zoom_str,
show_label=False,
sources=None,
show_clear_button=False,
show_share_button=False,
show_remove_button=False,
interactive=False)
number_reported = gr.Number(label = "Page (press enter to change)", value=1, precision=0)
return out_image_annotator, number_reported, number_reported
#print("page_num at start of update_annotator function:", page_num)
if page_num is None:
page_num = 0
# Check bounding values for current page and page max
if page_num > 0:
page_num_reported = page_num
elif page_num == 0: page_num_reported = 1
else:
page_num = 0
page_num_reported = 1
page_max_reported = len(image_annotator_object)
if page_num_reported > page_max_reported:
page_num_reported = page_max_reported
out_image_annotator = image_annotator(
value = image_annotator_object[page_num_reported - 1],
boxes_alpha=0.1,
box_thickness=1,
#label_list=["Redaction"],
#label_colors=[(0, 0, 0)],
show_label=False,
height=zoom_str,
width=zoom_str,
box_min_size=1,
box_selected_thickness=2,
handle_size=4,
sources=None,#["upload"],
show_clear_button=False,
show_share_button=False,
show_remove_button=False,
handles_cursor=True,
interactive=True
)
number_reported = gr.Number(label = "Page (press enter to change)", value=page_num_reported, precision=0)
return out_image_annotator, number_reported, number_reported, page_num_reported
def modify_existing_page_redactions(image_annotated:AnnotatedImageData, current_page:int, previous_page:int, all_image_annotations:List[AnnotatedImageData], clear_all:bool=False):
'''
Overwrite current image annotations with modifications
'''
if not current_page:
current_page = 1
#If no previous page or is 0, i.e. first time run, then rewrite current page
#if not previous_page:
# previous_page = current_page
image_annotated['image'] = all_image_annotations[previous_page - 1]["image"]
if clear_all == False:
all_image_annotations[previous_page - 1] = image_annotated
else:
all_image_annotations[previous_page - 1]["boxes"] = []
return all_image_annotations, current_page, current_page
def apply_redactions(image_annotated:AnnotatedImageData, file_paths:str, doc:Document, all_image_annotations:List[AnnotatedImageData], current_page:int, progress=gr.Progress(track_tqdm=True)):
'''
Apply modified redactions to a pymupdf
'''
#print("all_image_annotations:", all_image_annotations)
output_files = []
image_annotated['image'] = all_image_annotations[current_page - 1]["image"]
all_image_annotations[current_page - 1] = image_annotated
if not image_annotated:
print("No image annotations found")
return doc, all_image_annotations
if isinstance(file_paths, list):
file_path = file_paths[-1].name
else:
file_path = file_paths
print("file_path:", file_path)
file_base = get_file_path_end(file_path)
# If working with image docs
if is_pdf(file_path) == False:
unredacted_doc = Image.open(file_paths[-1])
image = unredacted_doc
# try:
# image = Image.open(image_annotated['image'])
# except:
# image = Image.fromarray(image_annotated['image'].astype('uint8'))
draw = ImageDraw.Draw(unredacted_doc)
for img_annotation_box in image_annotated['boxes']:
coords = [img_annotation_box["xmin"],
img_annotation_box["ymin"],
img_annotation_box["xmax"],
img_annotation_box["ymax"]]
fill = img_annotation_box["color"]
draw.rectangle(coords, fill=fill)
image.save(output_folder + file_base + "_redacted.png")
doc = [image]
# If working with pdfs
else:
unredacted_doc = pymupdf.open(file_path)
number_of_pages = unredacted_doc.page_count
print("Saving pages to file.")
for i in progress.tqdm(range(0, number_of_pages), desc="Saving redactions to file", unit = "pages"):
#print("Saving page", str(i))
image_loc = all_image_annotations[i]['image']
#print("Image location:", image_loc)
# Load in image object
if isinstance(image_loc, np.ndarray):
image = Image.fromarray(image_loc.astype('uint8'))
#all_image_annotations[i]['image'] = image_loc.tolist()
elif isinstance(image_loc, Image.Image):
image = image_loc
#image_out_folder = output_folder + file_base + "_page_" + str(i) + ".png"
#image_loc.save(image_out_folder)
#all_image_annotations[i]['image'] = image_out_folder
elif isinstance(image_loc, str):
image = Image.open(image_loc)
pymupdf_page = unredacted_doc.load_page(i) #doc.load_page(current_page -1)
pymupdf_page = redact_page_with_pymupdf(pymupdf_page, all_image_annotations[i], image)
#try:
out_pdf_file_path = output_folder + file_base + "_redacted.pdf"
unredacted_doc.save(out_pdf_file_path)
output_files.append(out_pdf_file_path)
# Save the gradio_annotation_boxes to a JSON file
try:
out_annotation_file_path = output_folder + file_base + '_redactions.json'
with open(out_annotation_file_path, 'w') as f:
json.dump(all_image_annotations, f)
output_files.append(out_annotation_file_path)
except:
print("Could not save annotations to json file.")
return doc, all_image_annotations, output_files
def crop(annotations:AnnotatedImageData):
if annotations["boxes"]:
box = annotations["boxes"][0]
return annotations["image"][
box["ymin"]:box["ymax"],
box["xmin"]:box["xmax"]
]
return None
def get_boxes_json(annotations:AnnotatedImageData):
return annotations["boxes"]