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Runtime error
Runtime error
Simon Duerr
commited on
Commit
·
3817115
1
Parent(s):
0605e17
remove py3dmol
Browse files
app.py
CHANGED
@@ -10,6 +10,7 @@ if not os.path.isfile("RF2_apr23.pt"):
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if not os.path.isdir("RoseTTAFold2"):
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print("install RoseTTAFold2")
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os.system("git clone https://github.com/sokrypton/RoseTTAFold2.git")
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os.system(
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"cd RoseTTAFold2/SE3Transformer; pip -q install --no-cache-dir -r requirements.txt; pip -q install ."
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)
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@@ -23,6 +24,7 @@ if not os.path.isdir("RoseTTAFold2"):
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os.system(
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f"curl -fsSL https://github.com/soedinglab/hh-suite/releases/download/v3.3.0/hhsuite-3.3.0-SSE2-Linux.tar.gz | tar xz -C hhsuite/"
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)
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if os.path.isfile(f"RF2_apr23.pt.aria2"):
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@@ -39,7 +41,6 @@ import matplotlib.pyplot as plt
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import numpy as np
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from parsers import parse_a3m
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from api import run_mmseqs2
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-
import py3Dmol
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import torch
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from string import ascii_uppercase, ascii_lowercase
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import hashlib, re, os
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if not os.path.isdir("RoseTTAFold2"):
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print("install RoseTTAFold2")
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os.system("git clone https://github.com/sokrypton/RoseTTAFold2.git")
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print(os.listdir("RoseTTAFold2"))
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os.system(
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"cd RoseTTAFold2/SE3Transformer; pip -q install --no-cache-dir -r requirements.txt; pip -q install ."
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)
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os.system(
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f"curl -fsSL https://github.com/soedinglab/hh-suite/releases/download/v3.3.0/hhsuite-3.3.0-SSE2-Linux.tar.gz | tar xz -C hhsuite/"
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)
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print(os.listdir("hhsuite"))
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if os.path.isfile(f"RF2_apr23.pt.aria2"):
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import numpy as np
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from parsers import parse_a3m
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from api import run_mmseqs2
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import torch
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from string import ascii_uppercase, ascii_lowercase
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import hashlib, re, os
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