diff --git "a/data/variant_inventory/Copy of annotated_variants_of_interest.csv" "b/data/variant_inventory/Copy of annotated_variants_of_interest.csv" new file mode 100755--- /dev/null +++ "b/data/variant_inventory/Copy of annotated_variants_of_interest.csv" @@ -0,0 +1,487 @@ 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'NP_001165282.1:p.Asn322Thr', 'NP_001165283.1:p.Asn360Thr']",RCV000020146,Pathogenic,C0017205,MONDO:0018150,Gaucher disease,"['Acute cerebral Gaucher disease', 'Cerebroside lipidosis syndrome', 'Gaucher splenomegaly', 'Sphingolipidosis 1', 'Glucocerebrosidosis', 'Glucosylceramidase deficiency', 'Glucosyl cerebroside lipidosis', 'Kerasin lipoidosis', 'Kerasin thesaurismosis']",2011-02-01,1.0,not provided,NM_000157.4(GBA):c.1226A>C (p.Asn409Thr),no assertion criteria provided,T,rs76763715,single nucleotide variant,38301.0,t,Pathogenic,38301,NC_000001.11:g.155235843T>G,C0017205,ORPHA355,no_assertion_criteria_provided,Gaucher_disease,"['Glycosyl hydrolase family 30, TIM-barrel domain', 'Glycosyl hydrolase family 30, TIM-barrel domain']",0.51296,0.079051,D,0.0001,0.90901,1.74379054549,2010-10-26T08:39Z,rs80356766,133.0,"pathogenic,risk factor",Gaucherdisease 1 (GD1) [MIM:230800],VAR_003302,P04062,Disease,"GAUCHER DISEASE, TYPE 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'GBA']",0.44625,0.999878789656551,3.53,3.53,0.39533,0.0,0.89359,0.724815,0.0,0.96076,0.743671,153472258.0,153472258.0,155205634.0,155205634.0,155235843.0,155235843.0,"['c.1079A>G', 'c.1226A>G', 'c.965A>G']","['p.N360S', 'p.N409S', 'p.N322S', 'p.Asn360Ser', 'p.Asn322Ser', 'p.Asn409Ser']",0.0,0.83352,0.714379,0.0,0.92422,0.732398,"['D', 'D', 'D']",0.81197,"[0.943606, 0.950805, 0.950805]",D,0.97969,0.745793,D,0.96792,0.9033,"['T', 'T', 'T', 'T']",0.00425,"[0.01917398, 0.01917398, 0.01917398, 0.01917398]",D,0.97824,1.0356,"['L', 'L']",0.46185,"[1.78, 1.78]","['N409S', 'N409S', 'N360S', 'N296S', 'N322S']",0.45564,"['simple_aae', 'simple_aae', 'simple_aae', 'simple_aae', 'simple_aae']","['D', 'D', 'D', 'D', 'D']","[0.998851, 0.998851, 0.998851, 0.998851, 0.998455]",,,,,,0.92801,"[0.928734609518, 0.928734609518, 0.928734609518, 0.928734609518]",0.71638,1.0,0.42601,0.887,0.56301,0.994,0.59223,4.359,0.22564,0.497,0.5132,1.038,"['P', 'P']",0.39488,"[0.607, 0.607]","['B', 'B']",0.38393,"[0.234, 0.234]",T,0.33919,0.464445948601,0.50502,"['N', 'N', 'N', 'N']","[-2.13, -2.13, -2.26, -2.26]",T,10.0,0.88069,0.673,rs76763715,0.539,"['D', 'D', 'D', 'D']","[0.013, 0.013, 0.015, 0.027]",0.54934,"['D', 'D', 'D', 'D']","[0.033, 0.033, 0.04, 0.028]",0.42987,10.3278,0.0,0.0,0.0,1.0,"[1, 1, 2, 2]",9.0,0.0024271844660194173,16.0,0.0021158423697434543,"[{'acc': 'P04062', 'entry': 'GLCM_HUMAN'}, {'acc': 'P04062', 'entry': 'GLCM_HUMAN'}, {'acc': 'P04062-5', 'entry': 'GLCM_HUMAN'}, {'acc': 'P04062-4', 'entry': 'GLCM_HUMAN'}]",YES,0.65844,"[0.642, 0.642, 0.624, 0.647]",,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.999, 'alspac': 0.998, 'dbgap_popfreq': 0.997, 'exac': 0.998, 'gnomad': 0.998, 'gnomad_exomes': 0.998, 'northernsweden': 0.998, 'page_study': 0.999, 'topmed': 0.998, 'twinsuk': 0.998}}, {'allele': 'C', 'freq': {'1000g': 0.001, 'alspac': 0.002, 'dbgap_popfreq': 0.003, 'exac': 0.002, 'gnomad': 0.002, 'gnomad_exomes': 0.002, 'northernsweden': 0.002, 'page_study': 0.001, 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{'codon_aligned_transcript_change': {'deleted_sequence': 'AAC', 'inserted_sequence': 'AAC', 'position': 1395, 'seq_id': 'NM_001005742.3'}, 'hgvs': 'NM_001005742.3:c.1226=', 'protein': {'variant': {'spdi': {'deleted_sequence': 'N', 'inserted_sequence': 'N', 'position': 408, 'seq_id': 'NP_001005742.1'}}}, 'protein_product': {'refseq': 'NP_001005742.1'}, 'refseq': 'NM_001005742.3', 'so': [{'accession': 'SO:0001580', 'name': 'coding_sequence_variant'}]}, {'codon_aligned_transcript_change': {'deleted_sequence': 'AAC', 'inserted_sequence': 'AAC', 'position': 1231, 'seq_id': 'NM_001171811.2'}, 'hgvs': 'NM_001171811.2:c.965=', 'protein': {'variant': {'spdi': {'deleted_sequence': 'N', 'inserted_sequence': 'N', 'position': 321, 'seq_id': 'NP_001165282.1'}}}, 'protein_product': {'refseq': 'NP_001165282.1'}, 'refseq': 'NM_001171811.2', 'so': [{'accession': 'SO:0001580', 'name': 'coding_sequence_variant'}]}, {'codon_aligned_transcript_change': {'deleted_sequence': 'AAC', 'inserted_sequence': 'AAC', 'position': 1214, 'seq_id': 'NM_001171812.2'}, 'hgvs': 'NM_001171812.2:c.1079=', 'protein': {'variant': {'spdi': {'deleted_sequence': 'N', 'inserted_sequence': 'N', 'position': 359, 'seq_id': 'NP_001165283.1'}}}, 'protein_product': {'refseq': 'NP_001165283.1'}, 'refseq': 'NM_001171812.2', 'so': [{'accession': 'SO:0001580', 'name': 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'NG_042867.1:g.2305T>C']","['NP_000148.2:p.Asn409Ser', 'NP_001005741.1:p.Asn409Ser', 'NP_001005741.1:p.Asn409Ser', 'NP_001005742.1:p.Asn409Ser', 'NP_001165282.1:p.Asn322Ser', 'NP_001165283.1:p.Asn360Ser', 'P04062:p.Asn409Ser']",,,,,,,,,,,,T,rs76763715,single nucleotide variant,4290.0,t,"Pathogenic/Likely_pathogenic,_risk_factor",4290,NC_000001.11:g.155235843T>C,"['C0040034', 'C1458140', 'C0026837', 'C0085623', 'C0030567', 'C0752347', 'C3160718', 'C1961835', 'C0268250', 'C0268251', 'C1856476', 'C1842704', 'C0017205', 'C2676021', 'CN235283', 'CN239381', 'CN517202']","['ORPHA319705', 'ORPHA77259', 'ORPHA77260', 'ORPHA77261', 'ORPHA2072', 'ORPHA85212', 'ORPHA355']","criteria_provided,_multiple_submitters,_no_conflicts","['Thrombocytopenia', 'Abnormal_bleeding', 'Rigidity', 'Akinesia', 'Parkinson_disease', 'Lewy_body_dementia', 'Parkinson_disease,_late-onset', ""Gaucher's_disease,_type_1"", ""Acute_neuronopathic_Gaucher's_disease"", ""Subacute_neuronopathic_Gaucher's_disease"", 'Gaucher_disease_type_3C', 'Gaucher_disease,_perinatal_lethal', 'Gaucher_disease', 'Dementia,_Lewy_body,_susceptibility_to', 'none_provided', ""Susceptibility_to_Parkinson's_Disease"", 'not_provided']","['Glycosyl hydrolase family 30, TIM-barrel domain', 'Glycosyl hydrolase family 30, TIM-barrel domain']",0.51296,0.079051,D,0.0001,0.74992,1.0173728136,2010-10-26T08:39Z,rs80356766,133.0,,,,,,,,,606463.0003,"[{'accession': 'RCV000004515', 'clinical_significance': 'Pathogenic/Likely pathogenic', 'conditions': {'identifiers': {'medgen': 'C1961835', 'mondo': 'MONDO:0009265', 'omim': '230800', 'orphanet': '77259'}, 'name': 'Gaucher disease type I (GD1)', 'synonyms': ['GBA DEFICIENCY', 'GD I', ""Gaucher's disease, type 1"", 'Gaucher disease type 1', 'Gaucher disease, noncerebral juvenile', 'GD 1', 'Glucocerebrosidase deficiency', 'Acid beta-glucosidase deficiency']}, 'last_evaluated': '2022-03-25', 'number_submitters': 13, 'origin': 'germline', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'criteria provided, multiple submitters, no conflicts'}, {'accession': 'RCV000004516', 'clinical_significance': 'Pathogenic', 'conditions': {'identifiers': {'medgen': 'C3160718', 'mondo': 'MONDO:0008199', 'omim': '168600'}, 'name': 'Parkinson disease, late-onset (PD)', 'synonyms': [""Parkinson's disease"", 'PARKINSON DISEASE, AGE OF ONSET, MODIFIER', 'PARKINSON DISEASE, LATE-ONSET, SUSCEPTIBILITY TO', ""Susceptibility to Parkinson's Disease"", 'Hereditary late onset Parkinson disease']}, 'last_evaluated': '2021-05-03', 'number_submitters': 3, 'origin': 'germline', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'criteria provided, multiple submitters, no conflicts'}, {'accession': 'RCV000004517', 'clinical_significance': 'risk factor', 'conditions': {'identifiers': {'medgen': 'C2676021'}, 'name': 'Dementia, Lewy body, susceptibility to'}, 'last_evaluated': '2010-08-01', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000079336', 'clinical_significance': 'Pathogenic', 'conditions': {'identifiers': {'medgen': 'CN517202'}, 'name': 'not provided', 'synonyms': ['none provided']}, 'last_evaluated': '2022-03-23', 'number_submitters': 12, 'origin': 'germline', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'criteria provided, multiple submitters, no conflicts'}, {'accession': 'RCV000396221', 'clinical_significance': 'Pathogenic', 'conditions': {'identifiers': {'medgen': 'C0017205', 'mondo': 'MONDO:0018150'}, 'name': 'Gaucher disease', 'synonyms': ['Acute cerebral Gaucher disease', 'Cerebroside lipidosis syndrome', 'Gaucher splenomegaly', 'Sphingolipidosis 1', 'Glucocerebrosidosis', 'Glucosylceramidase deficiency', 'Glucosyl cerebroside lipidosis', 'Kerasin lipoidosis', 'Kerasin thesaurismosis']}, 'last_evaluated': '2020-01-22', 'number_submitters': 4, 'origin': 'germline', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'criteria provided, multiple submitters, no conflicts'}, {'accession': 'RCV000414782', 'clinical_significance': 'Likely pathogenic', 'conditions': [{'identifiers': {'human_phenotype_ontology': 'HP:0002063', 'medgen': 'C0026837'}, 'name': 'Rigidity'}, {'identifiers': {'human_phenotype_ontology': 'HP:0002304', 'medgen': 'C0085623'}, 'name': 'Akinesia'}], 'last_evaluated': '2014-02-19', 'number_submitters': 1, 'origin': 'unknown', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'criteria provided, single submitter'}, {'accession': 'RCV000515439', 'clinical_significance': 'Pathogenic', 'conditions': [{'identifiers': {'medgen': 'C0752347', 'mondo': 'MONDO:0007488', 'omim': '127750'}, 'name': 'Lewy body dementia (DLB)', 'synonyms': ['Diffuse Lewy body disease', 'Autosomal dominant diffuse Lewy body disease', 'Lewy Body Disease']}, {'identifiers': {'medgen': 'C1961835', 'mondo': 'MONDO:0009265', 'omim': '230800', 'orphanet': '77259'}, 'name': 'Gaucher disease type I (GD1)', 'synonyms': ['GBA DEFICIENCY', 'GD I', ""Gaucher's disease, type 1"", 'Gaucher disease type 1', 'Gaucher disease, noncerebral juvenile', 'GD 1', 'Glucocerebrosidase deficiency', 'Acid beta-glucosidase deficiency']}, {'identifiers': {'medgen': 'C0268250', 'mondo': 'MONDO:0009266', 'omim': '230900'}, 'name': 'Gaucher disease type II (GD2)', 'synonyms': ['GD II', 'Gaucher disease type 2', 'GD 2', 'Gaucher disease, infantile cerebral', 'Gaucher disease, acute neuronopathic type', ""Acute neuronopathic Gaucher's disease""]}, {'identifiers': {'medgen': 'C0268251', 'mondo': 'MONDO:0009267', 'omim': '231000', 'orphanet': '77261'}, 'name': 'Gaucher disease type III (GD3)', 'synonyms': ['GD III', 'GD 3', 'Gaucher disease, juvenile and adult, cerebral', 'Gaucher disease, chronic neuronopathic type', 'Gaucher disease, subacute neuronopathic type', 'Gaucher Disease, Type 3', ""Subacute neuronopathic Gaucher's disease""]}, {'identifiers': {'medgen': 'C1842704', 'mondo': 'MONDO:0011945', 'omim': '608013'}, 'name': 'Gaucher disease perinatal lethal', 'synonyms': ['Gaucher disease collodion type', 'Gaucher disease, perinatal-lethal form']}, {'identifiers': {'medgen': 'C1856476', 'mondo': 'MONDO:0009268', 'omim': '231005'}, 'name': 'Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome', 'synonyms': ['GAUCHER DISEASE, TYPE IIIC', 'Gaucher disease type 3C']}, {'identifiers': {'medgen': 'C3160718', 'mondo': 'MONDO:0008199', 'omim': '168600'}, 'name': 'Parkinson disease, late-onset (PD)', 'synonyms': [""Parkinson's disease"", 'PARKINSON DISEASE, AGE OF ONSET, MODIFIER', 'PARKINSON DISEASE, LATE-ONSET, SUSCEPTIBILITY TO', ""Susceptibility to Parkinson's Disease"", 'Hereditary late onset Parkinson disease']}], 'last_evaluated': '2017-05-18', 'number_submitters': 2, 'origin': 'unknown', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'criteria provided, single submitter'}, {'accession': 'RCV001004117', 'clinical_significance': 'Pathogenic', 'conditions': [{'identifiers': {'medgen': 'C1961835', 'mondo': 'MONDO:0009265', 'omim': '230800', 'orphanet': '77259'}, 'name': 'Gaucher disease type I (GD1)', 'synonyms': ['GBA DEFICIENCY', 'GD I', ""Gaucher's disease, type 1"", 'Gaucher disease type 1', 'Gaucher disease, noncerebral juvenile', 'GD 1', 'Glucocerebrosidase deficiency', 'Acid beta-glucosidase deficiency']}, {'identifiers': {'medgen': 'C0268250', 'mondo': 'MONDO:0009266', 'omim': '230900'}, 'name': 'Gaucher disease type II (GD2)', 'synonyms': ['GD II', 'Gaucher disease type 2', 'GD 2', 'Gaucher disease, infantile cerebral', 'Gaucher disease, acute neuronopathic type', ""Acute neuronopathic Gaucher's disease""]}, {'identifiers': {'medgen': 'C0268251', 'mondo': 'MONDO:0009267', 'omim': '231000', 'orphanet': '77261'}, 'name': 'Gaucher disease type III (GD3)', 'synonyms': ['GD III', 'GD 3', 'Gaucher disease, juvenile and adult, cerebral', 'Gaucher disease, chronic neuronopathic type', 'Gaucher disease, subacute neuronopathic type', 'Gaucher Disease, Type 3', ""Subacute neuronopathic Gaucher's disease""]}, {'identifiers': {'medgen': 'C1856476', 'mondo': 'MONDO:0009268', 'omim': '231005'}, 'name': 'Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome', 'synonyms': ['GAUCHER DISEASE, TYPE IIIC', 'Gaucher disease type 3C']}], 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'criteria provided, single submitter'}, {'accession': 'RCV001195689', 'clinical_significance': 'risk factor', 'conditions': {'identifiers': {'medgen': 'C0030567', 'mesh': 'D010300', 'mondo': 'MONDO:0005180', 'omim': 'PS168600'}, 'name': 'Parkinson disease (PD)'}, 'last_evaluated': '2020-04-14', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'criteria provided, single submitter'}, {'accession': 'RCV001197918', 'clinical_significance': 'Pathogenic', 'conditions': {'identifiers': {'medgen': 'C1842704', 'mondo': 'MONDO:0011945', 'omim': '608013'}, 'name': 'Gaucher disease perinatal lethal', 'synonyms': ['Gaucher disease collodion type', 'Gaucher disease, perinatal-lethal form']}, 'last_evaluated': '2019-03-04', 'number_submitters': 2, 'origin': 'unknown', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'criteria provided, multiple submitters, no conflicts'}, {'accession': 'RCV001270528', 'clinical_significance': 'Uncertain significance', 'conditions': [{'identifiers': {'human_phenotype_ontology': 'HP:0008183', 'medgen': 'C1458140'}, 'name': 'Abnormal bleeding'}, {'identifiers': {'human_phenotype_ontology': 'HP:0008302', 'medgen': 'C0040034', 'mesh': 'D013921', 'mondo': 'MONDO:0002049'}, 'name': 'Thrombocytopenia'}], 'last_evaluated': '2020-05-01', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV002247244', 'clinical_significance': 'Pathogenic', 'conditions': {'identifiers': {'medgen': 'C0752347', 'mondo': 'MONDO:0007488', 'omim': '127750'}, 'name': 'Lewy body dementia (DLB)', 'synonyms': ['Diffuse Lewy body disease', 'Autosomal dominant diffuse Lewy body disease', 'Lewy Body Disease']}, 'last_evaluated': '2022-05-04', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000157.4(GBA1):c.1226A>G (p.Asn409Ser)', 'review_status': 'criteria provided, single submitter'}]","['PS168600', '127750', '168600', '230800', '230900', '231000', '231005', '608013']","['ARUP_Laboratories,_Molecular_Genetics_and_Genomics,ARUP_Laboratories:1141007', 'Broad_Institute_Rare_Disease_Group,Broad_Institute:70ea0f99-df79-45a1-b766-b23ceb052e02', 'HGMD:CM880036', 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'page_study': 0.998, 'qatari': 0.991, 'sgdp_prj': 0.5, 'siberian': 0.5, 'topmed': 0.995, 'twinsuk': 0.992}}, {'allele': 'A', 'freq': {'1000g': 0.002, 'alspac': 0.008, 'dbgap_popfreq': 0.008, 'exac': 0.007, 'finrisk': 0.007, 'genome_dk': 0.05, 'gnomad': 0.006, 'gnomad_exomes': 0.006, 'goesp': 0.005, 'gonl': 0.011, 'mgp': 0.002, 'northernsweden': 0.012, 'page_study': 0.002, 'qatari': 0.009, 'sgdp_prj': 0.5, 'siberian': 0.5, 'topmed': 0.005, 'twinsuk': 0.008}}]",A,1,155.0,2629.0,False,glucosylceramidase beta,"[{'codon_aligned_transcript_change': {'deleted_sequence': 'ACG', 'inserted_sequence': 'ACG', 'position': 1358, 'seq_id': 'NM_000157.4'}, 'hgvs': 'NM_000157.4:c.1223=', 'protein': {'variant': {'spdi': {'deleted_sequence': 'T', 'inserted_sequence': 'T', 'position': 407, 'seq_id': 'NP_000148.2'}}}, 'protein_product': {'refseq': 'NP_000148.2'}, 'refseq': 'NM_000157.4', 'so': [{'accession': 'SO:0001580', 'name': 'coding_sequence_variant'}]}, {'codon_aligned_transcript_change': 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benign', 'conditions': {'identifiers': {'medgen': 'CN169374'}, 'name': 'not specified', 'synonyms': ['AllHighlyPenetrant']}, 'last_evaluated': '2016-01-05', 'number_submitters': 4, 'origin': 'germline', 'preferred_name': 'NM_139343.3(BIN1):c.486T>C (p.Thr162=)', 'review_status': 'criteria provided, multiple submitters, no conflicts'}, {'accession': 'RCV000349850', 'clinical_significance': 'Benign', 'conditions': {'identifiers': {'medgen': 'C0410204', 'mondo': 'MONDO:0009709', 'omim': '255200', 'orphanet': '169186'}, 'name': 'Myopathy, centronuclear, 2 (CNM2)', 'synonyms': ['MYOTUBULAR MYOPATHY, AUTOSOMAL RECESSIVE']}, 'last_evaluated': '2021-12-19', 'number_submitters': 3, 'origin': 'germline', 'preferred_name': 'NM_139343.3(BIN1):c.486T>C (p.Thr162=)', 'review_status': 'criteria provided, multiple submitters, no conflicts'}]",,,,,,,,,,,,,,,,"[{'accession': 'NM_139351.2', 'symbol': 'BIN1'}, {'accession': 'NM_139350.2', 'symbol': 'BIN1'}, {'accession': 'NM_139349.2', 'symbol': 'BIN1'}, 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'so': [{'accession': 'SO:0002153', 'name': 'genic_upstream_transcript_variant'}]}, {'codon_aligned_transcript_change': {'deleted_sequence': 'G', 'inserted_sequence': 'G', 'position': 130, 'seq_id': 'XR_923311.3'}, 'hgvs': 'XR_923311.3:n.131=', 'refseq': 'XR_923311.3', 'so': [{'accession': 'SO:0001619', 'name': 'non_coding_transcript_variant'}]}], 'strand': '+', 'symbol': 'LOC105373605'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr2:g.127115992G>T,17.123554,2,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.784, 'alspac': 0.811, 'dbgap_popfreq': 0.841, 'estonian': 0.794, 'genome_dk': 0.775, 'gnomad': 0.78, 'gonl': 0.778, 'korea1k': 0.813, 'korean': 0.801, 'northernsweden': 0.813, 'qatari': 0.713, 'sgdp_prj': 0.439, 'siberian': 0.5, 'tommo': 0.838, 'topmed': 0.781, 'twinsuk': 0.786, 'vietnamese': 0.939}}, {'allele': 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'intron_variant'}]}]",+,LOC105373605,127115992.0,127115992.0,G,rs7594230,snv,127115992.0,127115992.0,http://bit.ly/2suyRKt,,,,,intergenic_region,BIN1-CYP27C1,intergenic_region,BIN1-CYP27C1,BIN1-CYP27C1,n.127115992G>T,,,,MODIFIER,,,,T,127115992,G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2014-08-21T16:14Z,rs386424156,142.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr2:g.127115992G>A,17.123442,2,True,CA11161157,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.784, 'alspac': 0.811, 'dbgap_popfreq': 0.841, 'estonian': 0.794, 'genome_dk': 0.775, 'gnomad': 0.78, 'gonl': 0.778, 'korea1k': 0.813, 'korean': 0.801, 'northernsweden': 0.813, 'qatari': 0.713, 'sgdp_prj': 0.439, 'siberian': 0.5, 'tommo': 0.838, 'topmed': 0.781, 'twinsuk': 0.786, 'vietnamese': 0.939}}, {'allele': 'A', 'freq': {'1000g': 0.216, 'alspac': 0.189, 'dbgap_popfreq': 0.159, 'estonian': 0.206, 'genome_dk': 0.225, 'gnomad': 0.22, 'gonl': 0.222, 'korea1k': 0.187, 'korean': 0.199, 'northernsweden': 0.187, 'qatari': 0.287, 'sgdp_prj': 0.561, 'siberian': 0.5, 'tommo': 0.162, 'topmed': 0.219, 'twinsuk': 0.214, 'vietnamese': 0.061}}, {'allele': 'T', 'freq': {'dbgap_popfreq': 0.0}}]",A,2,155.0,105373605.0,False,uncharacterized LOC105373605,"[{'codon_aligned_transcript_change': {'deleted_sequence': 'G', 'inserted_sequence': 'G', 'position': 240, 'seq_id': 'XR_923310.2'}, 'hgvs': 'XR_923310.2:n.241=', 'refseq': 'XR_923310.2', 'so': [{'accession': 'SO:0001619', 'name': 'non_coding_transcript_variant'}]}, {'refseq': 'XR_923311.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,LOC105373605,127115992.0,127115992.0,G,rs7594230,snv,127115992.0,127115992.0,http://bit.ly/2suyRKt,,,,,intergenic_region,BIN1-CYP27C1,intergenic_region,BIN1-CYP27C1,BIN1-CYP27C1,n.127115992G>A,,,,MODIFIER,,,,A,127115992,G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,33298.0,11122.0,5945.0,5177.0,172.0,93.0,79.0,2836.0,1240.0,1596.0,616.0,315.0,301.0,684.0,304.0,380.0,1913.0,494.0,1419.0,91.0,47.0,44.0,14082.0,8103.0,5979.0,495.0,240.0,255.0,1287.0,304.0,983.0,17085.0,16213.0,0.219679,0.270069,0.270055,0.270086,0.189845,0.199571,0.179545,0.186187,0.183378,0.18843,0.177932,0.169173,0.188125,0.132764,0.133921,0.131853,0.18181,0.192368,0.178401,0.287975,0.286585,0.289474,0.207344,0.206183,0.208939,0.237524,0.23301,0.241935,0.267902,0.262976,0.269463,0.22019,0.219142,A,A,151576.0,41182.0,22014.0,19168.0,906.0,466.0,440.0,15232.0,6762.0,8470.0,3462.0,1862.0,1600.0,5152.0,2270.0,2882.0,10522.0,2568.0,7954.0,316.0,164.0,152.0,67916.0,39300.0,28616.0,2084.0,1030.0,1054.0,4804.0,1156.0,3648.0,77592.0,73984.0,0.0,59.9973,-0.014,1.0,16.1535,0.312,0.703501,22.5076,2,3828.0,1543.0,807.0,736.0,13.0,8.0,5.0,283.0,128.0,155.0,56.0,28.0,28.0,56.0,26.0,30.0,193.0,53.0,140.0,10.0,3.0,7.0,1420.0,821.0,599.0,70.0,34.0,36.0,184.0,42.0,142.0,1950.0,1878.0,0.0137631,127115992.0,G,rs7594230,snp,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2014-08-21T16:14Z,rs386424156,142.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr2:g.127127671A>T,17.123606,2,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.646, 'alspac': 0.711, 'dbgap_popfreq': 0.705, 'estonian': 0.715, 'genome_dk': 0.725, 'gnomad': 0.687, 'gonl': 0.744, 'korean': 0.614, 'northernsweden': 0.782, 'qatari': 0.667, 'sgdp_prj': 0.383, 'siberian': 0.346, 'topmed': 0.676, 'twinsuk': 0.708, 'vietnamese': 0.551}}, {'allele': 'G', 'freq': {'1000g': 0.354, 'alspac': 0.289, 'dbgap_popfreq': 0.295, 'estonian': 0.285, 'genome_dk': 0.275, 'gnomad': 0.313, 'gonl': 0.256, 'korean': 0.386, 'northernsweden': 0.218, 'qatari': 0.333, 'sgdp_prj': 0.617, 'siberian': 0.654, 'topmed': 0.324, 'twinsuk': 0.292, 'vietnamese': 0.449}}, {'allele': 'T', 'freq': {'dbgap_popfreq': 0.0, 'korean': 0.0}}]",T,2,155.0,105373605.0,False,uncharacterized LOC105373605,"[{'refseq': 'XR_923310.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_923311.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,LOC105373605,127127671.0,127127671.0,A,rs58682665,snv,127127671.0,127127671.0,http://bit.ly/2suyRKt,,,,,intergenic_region,BIN1-CYP27C1,intergenic_region,BIN1-CYP27C1,BIN1-CYP27C1,n.127127671A>T,,,,MODIFIER,,,,T,127127671,A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2008-05-25T00:09Z,rs62158730,130.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr2:g.127127671A>G,17.122793,2,True,CA55367734,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.646, 'alspac': 0.711, 'dbgap_popfreq': 0.705, 'estonian': 0.715, 'genome_dk': 0.725, 'gnomad': 0.687, 'gonl': 0.744, 'korean': 0.614, 'northernsweden': 0.782, 'qatari': 0.667, 'sgdp_prj': 0.383, 'siberian': 0.346, 'topmed': 0.676, 'twinsuk': 0.708, 'vietnamese': 0.551}}, {'allele': 'G', 'freq': {'1000g': 0.354, 'alspac': 0.289, 'dbgap_popfreq': 0.295, 'estonian': 0.285, 'genome_dk': 0.275, 'gnomad': 0.313, 'gonl': 0.256, 'korean': 0.386, 'northernsweden': 0.218, 'qatari': 0.333, 'sgdp_prj': 0.617, 'siberian': 0.654, 'topmed': 0.324, 'twinsuk': 0.292, 'vietnamese': 0.449}}, {'allele': 'T', 'freq': {'dbgap_popfreq': 0.0, 'korean': 0.0}}]",G,2,155.0,105373605.0,False,uncharacterized LOC105373605,"[{'refseq': 'XR_923310.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_923311.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,LOC105373605,127127671.0,127127671.0,A,rs58682665,snv,127127671.0,127127671.0,http://bit.ly/2suyRKt,,,,,intergenic_region,BIN1-CYP27C1,intergenic_region,BIN1-CYP27C1,BIN1-CYP27C1,n.127127671A>G,,,,MODIFIER,,,,G,127127671,A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,47649.0,13406.0,7097.0,6309.0,326.0,167.0,159.0,5359.0,2415.0,2944.0,1358.0,718.0,640.0,2193.0,961.0,1232.0,3089.0,768.0,2321.0,109.0,58.0,51.0,19719.0,11372.0,8347.0,701.0,353.0,348.0,1389.0,335.0,1054.0,24244.0,23405.0,0.313621,0.324302,0.321393,0.327638,0.357456,0.355319,0.359729,0.35118,0.356405,0.347006,0.391354,0.38478,0.399002,0.423196,0.421861,0.424242,0.292685,0.299065,0.290634,0.344937,0.353659,0.335526,0.290002,0.289055,0.291303,0.336695,0.343385,0.330171,0.288055,0.288296,0.287978,0.311876,0.315448,G,G,151932.0,41338.0,22082.0,19256.0,912.0,470.0,442.0,15260.0,6776.0,8484.0,3470.0,1866.0,1604.0,5182.0,2278.0,2904.0,10554.0,2568.0,7986.0,316.0,164.0,152.0,67996.0,39342.0,28654.0,2082.0,1028.0,1054.0,4822.0,1162.0,3660.0,77736.0,74196.0,0.0,59.9967,0.0,1.0,16.4051,0.35,0.691099,22.4811,2,7570.0,2188.0,1158.0,1030.0,51.0,25.0,26.0,955.0,438.0,517.0,256.0,132.0,124.0,451.0,211.0,240.0,453.0,121.0,332.0,21.0,10.0,11.0,2867.0,1618.0,1249.0,120.0,63.0,57.0,208.0,53.0,155.0,3829.0,3741.0,0.00692803,127127671.0,A,rs58682665,snp,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2008-05-25T00:09Z,rs62158730,130.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr2:g.127133357T>C,17.123737,2,True,CA11082142,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.887, 'alspac': 0.855, 'dbgap_popfreq': 0.879, 'estonian': 0.842, 'genome_dk': 0.85, 'gnomad': 0.898, 'gonl': 0.842, 'korean': 0.886, 'northernsweden': 0.86, 'qatari': 0.884, 'sgdp_prj': 0.418, 'siberian': 0.385, 'tommo': 0.887, 'topmed': 0.908, 'twinsuk': 0.867, 'vietnamese': 0.833}}, {'allele': 'C', 'freq': {'1000g': 0.113, 'alspac': 0.145, 'dbgap_popfreq': 0.121, 'estonian': 0.158, 'genome_dk': 0.15, 'gnomad': 0.102, 'gonl': 0.158, 'korean': 0.114, 'northernsweden': 0.14, 'qatari': 0.116, 'sgdp_prj': 0.582, 'siberian': 0.615, 'tommo': 0.113, 'topmed': 0.092, 'twinsuk': 0.133, 'vietnamese': 0.167}}]",C,2,155.0,105373605.0,False,uncharacterized LOC105373605,"[{'refseq': 'XR_923310.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_923311.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,LOC105373605,127133357.0,127133357.0,T,rs35968837,snv,127133357.0,127133357.0,http://bit.ly/2suyRKt,,,,,intergenic_region,BIN1-CYP27C1,intergenic_region,BIN1-CYP27C1,BIN1-CYP27C1,n.127133357T>C,,,,MODIFIER,,,,C,127133357,T,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,16369.0,1088.0,586.0,502.0,100.0,55.0,45.0,1546.0,670.0,876.0,274.0,153.0,121.0,596.0,271.0,325.0,1792.0,402.0,1390.0,28.0,19.0,9.0,9519.0,5562.0,3957.0,179.0,76.0,103.0,1247.0,306.0,941.0,8100.0,8269.0,0.107746,0.0262904,0.0264895,0.0260617,0.109649,0.117021,0.10181,0.101311,0.0988784,0.103253,0.0790081,0.0819058,0.075625,0.11528,0.119069,0.112301,0.169665,0.156542,0.17388,0.0886076,0.115854,0.0592105,0.14008,0.141476,0.138163,0.085728,0.0736434,0.0975379,0.259359,0.264249,0.257808,0.104183,0.111481,C,C,151922.0,41384.0,22122.0,19262.0,912.0,470.0,442.0,15260.0,6776.0,8484.0,3468.0,1868.0,1600.0,5170.0,2276.0,2894.0,10562.0,2568.0,7994.0,316.0,164.0,152.0,67954.0,39314.0,28640.0,2088.0,1032.0,1056.0,4808.0,1158.0,3650.0,77748.0,74174.0,1.44649e-15,59.9969,-0.027,1.0,15.1286,0.37,0.69467,22.248,2,1189.0,21.0,16.0,5.0,8.0,2.0,6.0,72.0,33.0,39.0,10.0,3.0,7.0,33.0,22.0,11.0,167.0,41.0,126.0,2.0,2.0,0.0,680.0,394.0,286.0,15.0,4.0,11.0,181.0,39.0,142.0,556.0,633.0,0.0423651,127133357.0,T,rs35968837,snp,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'date': '2008-05-25T21:15Z', 'rsid': 'rs60034543', 'rv': 130}, {'date': '2008-05-25T21:15Z', 'rsid': 'rs62158733', 'rv': 130}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr2:g.127133851A>C,17.123444,2,True,CA11197168,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.517, 'alspac': 0.58, 'dbgap_popfreq': 0.557, 'estonian': 0.582, 'genome_dk': 0.6, 'gnomad': 0.535, 'gonl': 0.561, 'korean': 0.546, 'northernsweden': 0.485, 'qatari': 0.579, 'sgdp_prj': 0.285, 'siberian': 0.31, 'tommo': 0.593, 'topmed': 0.53, 'twinsuk': 0.601}}, {'allele': 'C', 'freq': {'1000g': 0.483, 'alspac': 0.42, 'dbgap_popfreq': 0.443, 'estonian': 0.418, 'genome_dk': 0.4, 'gnomad': 0.465, 'gonl': 0.439, 'korean': 0.454, 'northernsweden': 0.515, 'qatari': 0.421, 'sgdp_prj': 0.715, 'siberian': 0.69, 'tommo': 0.407, 'topmed': 0.47, 'twinsuk': 0.399}}]",C,2,155.0,105373605.0,False,uncharacterized LOC105373605,"[{'refseq': 'XR_923310.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_923311.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,LOC105373605,127133851.0,127133851.0,A,rs4663105,snv,127133851.0,127133851.0,http://bit.ly/2suyRKt,,,,,intergenic_region,BIN1-CYP27C1,intergenic_region,BIN1-CYP27C1,BIN1-CYP27C1,n.127133851A>C,,,,MODIFIER,,,,C,127133851,A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,70057.0,23538.0,12583.0,10955.0,400.0,203.0,197.0,7052.0,3154.0,3898.0,1366.0,756.0,610.0,2336.0,1037.0,1299.0,4174.0,957.0,3217.0,111.0,57.0,54.0,27930.0,16176.0,11754.0,873.0,432.0,441.0,2277.0,561.0,1716.0,35916.0,34141.0,0.462355,0.571255,0.571799,0.570632,0.438596,0.431915,0.445701,0.462973,0.465879,0.460648,0.39366,0.405145,0.380299,0.454652,0.459663,0.450729,0.398663,0.375,0.406289,0.353503,0.351852,0.355263,0.411364,0.411855,0.410692,0.419308,0.420233,0.418406,0.47398,0.484456,0.470653,0.463169,0.461502,C,C,151522.0,41204.0,22006.0,19198.0,912.0,470.0,442.0,15232.0,6770.0,8462.0,3470.0,1866.0,1604.0,5138.0,2256.0,2882.0,10470.0,2552.0,7918.0,314.0,162.0,152.0,67896.0,39276.0,28620.0,2082.0,1028.0,1054.0,4804.0,1158.0,3646.0,77544.0,73978.0,4.82164e-16,59.952,-0.022,1.0,19.2638,0.017,0.669058,6.612,2,16652.0,6752.0,3630.0,3122.0,86.0,42.0,44.0,1622.0,748.0,874.0,283.0,150.0,133.0,527.0,250.0,277.0,845.0,188.0,657.0,21.0,11.0,10.0,5768.0,3317.0,2451.0,205.0,100.0,105.0,543.0,131.0,412.0,8567.0,8085.0,0.0255372,127133851.0,A,rs4663105,snp,"[23399914, 25778476]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2008-05-26T02:59Z,rs60350203,130.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr2:g.134707046A>T,17.12388,2,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.42, 'alspac': 0.735, 'dbgap_popfreq': 0.745, 'estonian': 0.699, 'genome_dk': 0.8, 'gnomad': 0.591, 'gonl': 0.76, 'korea1k': 0.313, 'korean': 0.302, 'northernsweden': 0.73, 'qatari': 0.375, 'sgdp_prj': 0.221, 'siberian': 0.265, 'tommo': 0.34, 'topmed': 0.564, 'twinsuk': 0.745, 'vietnamese': 0.28}}, {'allele': 'G', 'freq': {'1000g': 0.58, 'alspac': 0.265, 'dbgap_popfreq': 0.255, 'estonian': 0.301, 'genome_dk': 0.2, 'gnomad': 0.409, 'gonl': 0.24, 'korea1k': 0.687, 'korean': 0.698, 'northernsweden': 0.27, 'qatari': 0.625, 'sgdp_prj': 0.779, 'siberian': 0.735, 'tommo': 0.66, 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+chr2:g.134707046A>C,17.12324,2,True,CA56747977,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.42, 'alspac': 0.735, 'dbgap_popfreq': 0.745, 'estonian': 0.699, 'genome_dk': 0.8, 'gnomad': 0.591, 'gonl': 0.76, 'korea1k': 0.313, 'korean': 0.302, 'northernsweden': 0.73, 'qatari': 0.375, 'sgdp_prj': 0.221, 'siberian': 0.265, 'tommo': 0.34, 'topmed': 0.564, 'twinsuk': 0.745, 'vietnamese': 0.28}}, {'allele': 'G', 'freq': {'1000g': 0.58, 'alspac': 0.265, 'dbgap_popfreq': 0.255, 'estonian': 0.301, 'genome_dk': 0.2, 'gnomad': 0.409, 'gonl': 0.24, 'korea1k': 0.687, 'korean': 0.698, 'northernsweden': 0.27, 'qatari': 0.625, 'sgdp_prj': 0.779, 'siberian': 0.735, 'tommo': 0.66, 'topmed': 0.436, 'twinsuk': 0.255, 'vietnamese': 0.72}}, {'allele': 'T', 'freq': {'dbgap_popfreq': 0.0, 'korean': 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+chr2:g.168235432A>C,17.123613,2,True,CA11131522,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.818, 'alspac': 0.866, 'daghestan': 0.838, 'dbgap_popfreq': 0.863, 'genome_dk': 0.925, 'gnomad': 0.861, 'gonl': 0.866, 'hapmap': 0.87, 'korea1k': 0.716, 'korean': 0.695, 'northernsweden': 0.846, 'page_study': 0.831, 'prjeb37584': 0.671, 'qatari': 0.88, 'sgdp_prj': 0.438, 'siberian': 0.45, 'tommo': 0.757, 'topmed': 0.856, 'twinsuk': 0.868}}, {'allele': 'C', 'freq': {'1000g': 0.182, 'alspac': 0.134, 'daghestan': 0.162, 'dbgap_popfreq': 0.137, 'genome_dk': 0.075, 'gnomad': 0.139, 'gonl': 0.134, 'hapmap': 0.13, 'korea1k': 0.284, 'korean': 0.305, 'northernsweden': 0.154, 'page_study': 0.169, 'prjeb37584': 0.329, 'qatari': 0.12, 'sgdp_prj': 0.562, 'siberian': 0.55, 'tommo': 0.243, 'topmed': 0.144, 'twinsuk': 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carboxylase 1,"[{'hgvs': 'NM_001293273.2:c.44+2753=', 'protein_product': {'refseq': 'NP_001280202.1'}, 'refseq': 'NM_001293273.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001363880.1:c.-55+2753=', 'protein_product': {'refseq': 'NP_001350809.1'}, 'refseq': 'NM_001363880.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_020166.5:c.273+603=', 'protein_product': {'refseq': 'NP_064551.3'}, 'refseq': 'NM_020166.5', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'NR_120639.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'NR_120640.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011512992.2:c.159+603=', 'protein_product': {'refseq': 'XP_011511294.1'}, 'refseq': 'XM_011512992.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_001740207.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, 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'pseudogene'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr4:g.881883T>C,17.123457,4,True,CA2798138,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.818, 'alspac': 0.836, 'dbgap_popfreq': 0.819, 'estonian': 0.841, 'exac': 0.735, 'gnomad': 0.866, 'gnomad_exomes': 0.809, 'goesp': 0.876, 'gonl': 0.826, 'korean': 0.728, 'mgp': 0.989, 'northernsweden': 0.862, 'qatari': 0.722, 'sgdp_prj': 0.403, 'siberian': 0.333, 'tommo': 0.76, 'topmed': 0.857, 'twinsuk': 0.831, 'vietnamese': 0.712}}, {'allele': 'C', 'freq': {'1000g': 0.182, 'alspac': 0.164, 'dbgap_popfreq': 0.181, 'estonian': 0.159, 'exac': 0.265, 'gnomad': 0.134, 'gnomad_exomes': 0.191, 'goesp': 0.124, 'gonl': 0.174, 'korean': 0.272, 'mgp': 0.011, 'northernsweden': 0.138, 'qatari': 0.278, 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'topmed': 0.488, 'twinsuk': 0.433, 'vietnamese': 0.579}}, {'allele': 'G', 'freq': {'korean': 0.0}}, {'allele': 'T', 'freq': {'korean': 0.0}}]",T,4,155.0,683.0,False,bone marrow stromal cell antigen 1,"[{'hgvs': 'NM_004334.3:c.451+1061=', 'protein_product': {'refseq': 'NP_004325.2'}, 'refseq': 'NM_004334.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_005248185.2:c.451+1061=', 'protein_product': {'refseq': 'XP_005248242.1'}, 'refseq': 'XM_005248185.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_005248186.2:c.451+1061=', 'protein_product': {'refseq': 'XP_005248243.1'}, 'refseq': 'XM_005248186.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011513878.3:c.451+1061=', 'protein_product': {'refseq': 'XP_011512180.1'}, 'refseq': 'XM_011513878.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011513879.2:c.451+1061=', 'protein_product': {'refseq': 'XP_011512181.1'}, 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'intron_variant'}]}]",+,BST1,15708707.0,15708707.0,A,rs35519415,snv,15708707.0,15708707.0,http://bit.ly/2suyRKt,,,,,intron_variant,NM_004334.2,transcript,BST1,BST1,c.451+1061A>T,,,,MODIFIER,3,8,protein_coding,T,15708707,A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'date': '2008-05-23T09:27Z', 'rsid': 'rs56666076', 'rv': 130}, {'date': '2008-05-23T09:27Z', 'rsid': 'rs62290608', 'rv': 130}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr4:g.15708707A>G,17.123325,4,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.501, 'alspac': 0.566, 'dbgap_popfreq': 0.563, 'estonian': 0.558, 'genome_dk': 0.575, 'gnomad': 0.515, 'gonl': 0.55, 'korea1k': 0.45, 'korean': 0.425, 'northernsweden': 0.593, 'qatari': 0.625, 'sgdp_prj': 0.318, 'siberian': 0.261, 'tommo': 0.446, 'topmed': 0.512, 'twinsuk': 0.567, 'vietnamese': 0.421}}, {'allele': 'C', 'freq': {'1000g': 0.499, 'alspac': 0.434, 'dbgap_popfreq': 0.437, 'estonian': 0.442, 'genome_dk': 0.425, 'gnomad': 0.485, 'gonl': 0.45, 'korea1k': 0.55, 'korean': 0.575, 'northernsweden': 0.407, 'qatari': 0.375, 'sgdp_prj': 0.682, 'siberian': 0.739, 'tommo': 0.554, 'topmed': 0.488, 'twinsuk': 0.433, 'vietnamese': 0.579}}, {'allele': 'G', 'freq': {'korean': 0.0}}, {'allele': 'T', 'freq': {'korean': 0.0}}]",G,4,155.0,683.0,False,bone marrow stromal cell antigen 1,"[{'hgvs': 'NM_004334.3:c.451+1061=', 'protein_product': {'refseq': 'NP_004325.2'}, 'refseq': 'NM_004334.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_005248185.2:c.451+1061=', 'protein_product': {'refseq': 'XP_005248242.1'}, 'refseq': 'XM_005248185.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_005248186.2:c.451+1061=', 'protein_product': {'refseq': 'XP_005248243.1'}, 'refseq': 'XM_005248186.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011513878.3:c.451+1061=', 'protein_product': {'refseq': 'XP_011512180.1'}, 'refseq': 'XM_011513878.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011513879.2:c.451+1061=', 'protein_product': {'refseq': 'XP_011512181.1'}, 'refseq': 'XM_011513879.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011513881.2:c.277+1061=', 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0.0}}]",C,4,155.0,683.0,False,bone marrow stromal cell antigen 1,"[{'hgvs': 'NM_004334.3:c.792-837=', 'protein_product': {'refseq': 'NP_004325.2'}, 'refseq': 'NM_004334.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_005248185.2:c.792-837=', 'protein_product': {'refseq': 'XP_005248242.1'}, 'refseq': 'XM_005248185.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_005248186.2:c.792-837=', 'protein_product': {'refseq': 'XP_005248243.1'}, 'refseq': 'XM_005248186.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011513878.3:c.792-837=', 'protein_product': {'refseq': 'XP_011512180.1'}, 'refseq': 'XM_011513878.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011513879.2:c.792-837=', 'protein_product': {'refseq': 'XP_011512181.1'}, 'refseq': 'XM_011513879.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011513881.2:c.618-837=', 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'gonl': 0.756, 'hapmap': 0.594, 'korea1k': 0.635, 'korean': 0.616, 'northernsweden': 0.728, 'qatari': 0.718, 'sgdp_prj': 0.361, 'siberian': 0.389, 'tommo': 0.669, 'topmed': 0.641, 'twinsuk': 0.745, 'vietnamese': 0.659}}, {'allele': 'A', 'freq': {'korean': 0.0}}, {'allele': 'C', 'freq': {'1000g': 0.351, 'alspac': 0.258, 'dbgap_popfreq': 0.297, 'estonian': 0.219, 'gnomad': 0.346, 'gonl': 0.244, 'hapmap': 0.406, 'korea1k': 0.365, 'korean': 0.384, 'northernsweden': 0.272, 'qatari': 0.282, 'sgdp_prj': 0.639, 'siberian': 0.611, 'tommo': 0.331, 'topmed': 0.359, 'twinsuk': 0.255, 'vietnamese': 0.341}}, {'allele': 'T', 'freq': {'korean': 0.0}}]",A,4,155.0,683.0,False,bone marrow stromal cell antigen 1,"[{'hgvs': 'NM_004334.3:c.792-837=', 'protein_product': {'refseq': 'NP_004325.2'}, 'refseq': 'NM_004334.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_005248185.2:c.792-837=', 'protein_product': {'refseq': 'XP_005248242.1'}, 'refseq': 'XM_005248185.2', 'so': 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+chr4:g.89689176C>T,17.123468,4,True,CA101493277,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'C', 'freq': {'1000g': 0.995, 'alspac': 0.974, 'dbgap_popfreq': 0.981, 'estonian': 0.978, 'genome_dk': 0.975, 'gnomad': 0.985, 'gonl': 0.967, 'northernsweden': 0.985, 'qatari': 0.991, 'sgdp_prj': 0.5, 'topmed': 0.988, 'twinsuk': 0.978}}, {'allele': 'T', 'freq': {'1000g': 0.005, 'alspac': 0.026, 'dbgap_popfreq': 0.019, 'estonian': 0.022, 'genome_dk': 0.025, 'gnomad': 0.015, 'gonl': 0.033, 'northernsweden': 0.015, 'qatari': 0.009, 'sgdp_prj': 0.5, 'topmed': 0.012, 'twinsuk': 0.022}}]",T,4,155.0,105377329.0,False,uncharacterized LOC105377329,"[{'refseq': 'XR_001741764.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_001741765.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_001741766.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938982.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938983.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938984.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938985.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938986.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938987.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938989.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,LOC105377329,89689176.0,89689176.0,C,rs114088559,snv,89689176.0,89689176.0,http://bit.ly/2suyRKt,,,,,intergenic_region,GPRIN3-SNCA,intergenic_region,GPRIN3-SNCA,GPRIN3-SNCA,n.89689176C>T,,,,MODIFIER,,,,T,89689176,C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,2141.0,178.0,100.0,78.0,34.0,15.0,19.0,73.0,41.0,32.0,4.0,2.0,2.0,0.0,0.0,0.0,261.0,57.0,204.0,3.0,1.0,2.0,1548.0,901.0,647.0,21.0,10.0,11.0,19.0,4.0,15.0,1131.0,1010.0,0.0140713,0.00429578,0.00451508,0.00404397,0.0373626,0.0319149,0.0431818,0.00477874,0.00604898,0.00376559,0.00115207,0.00107066,0.00124688,0.0,0.0,0.0,0.0246319,0.0221617,0.0254237,0.00949367,0.00609756,0.0131579,0.022752,0.0228901,0.0225624,0.0100287,0.00967118,0.0103774,0.00394027,0.00344234,0.00409836,0.0145306,0.0135902,T,T,152154.0,41436.0,22148.0,19288.0,910.0,470.0,440.0,15276.0,6778.0,8498.0,3472.0,1868.0,1604.0,5194.0,2278.0,2916.0,10596.0,2572.0,8024.0,316.0,164.0,152.0,68038.0,39362.0,28676.0,2094.0,1034.0,1060.0,4822.0,1162.0,3660.0,77836.0,74318.0,0.0,59.9971,-0.03,1.0,14.0351,0.356,0.688038,22.2289,4,33.0,1.0,0.0,1.0,3.0,0.0,3.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,5.0,0.0,5.0,0.0,0.0,0.0,24.0,20.0,4.0,0.0,0.0,0.0,0.0,0.0,0.0,20.0,13.0,0.016921,89689176.0,C,rs114088559,snp,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr4:g.89715268G>A,17.123945,4,True,CA16192183,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.577, 'alspac': 0.887, 'dbgap_popfreq': 0.809, 'estonian': 0.919, 'genome_dk': 0.95, 'gnomad': 0.726, 'gonl': 0.881, 'korean': 0.421, 'northernsweden': 0.898, 'qatari': 0.648, 'sgdp_prj': 0.29, 'siberian': 0.455, 'tommo': 0.357, 'topmed': 0.7, 'twinsuk': 0.899}}, {'allele': 'A', 'freq': {'1000g': 0.423, 'alspac': 0.113, 'dbgap_popfreq': 0.191, 'estonian': 0.081, 'genome_dk': 0.05, 'gnomad': 0.274, 'gonl': 0.119, 'korean': 0.579, 'northernsweden': 0.102, 'qatari': 0.352, 'sgdp_prj': 0.71, 'siberian': 0.545, 'tommo': 0.643, 'topmed': 0.3, 'twinsuk': 0.101}}]",A,4,155.0,105377329.0,False,uncharacterized LOC105377329,"[{'refseq': 'XR_001741764.1', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_001741765.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_001741766.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938982.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938983.1', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_938984.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938985.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938986.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938987.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938989.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,LOC105377329,89715268.0,89715268.0,G,rs3933594,snv,89715268.0,89715268.0,http://bit.ly/2suyRKt,,,,,intergenic_region,GPRIN3-SNCA,intergenic_region,GPRIN3-SNCA,GPRIN3-SNCA,n.89715268G>A,,,,MODIFIER,,,,A,89715268,G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,41745.0,22909.0,12125.0,10784.0,76.0,33.0,43.0,4074.0,1968.0,2106.0,642.0,351.0,291.0,3051.0,1354.0,1697.0,1732.0,431.0,1301.0,96.0,49.0,47.0,7071.0,4078.0,2993.0,553.0,286.0,267.0,1541.0,389.0,1152.0,21064.0,20681.0,0.275657,0.557234,0.551989,0.563251,0.0837004,0.0708155,0.0972851,0.268203,0.291469,0.249585,0.185549,0.18871,0.181875,0.595898,0.601778,0.591289,0.164607,0.167966,0.163524,0.303797,0.29878,0.309211,0.104077,0.10374,0.104541,0.265865,0.27821,0.253802,0.321712,0.335924,0.317181,0.271723,0.279783,A,A,151438.0,41112.0,21966.0,19146.0,908.0,466.0,442.0,15190.0,6752.0,8438.0,3460.0,1860.0,1600.0,5120.0,2250.0,2870.0,10522.0,2566.0,7956.0,316.0,164.0,152.0,67940.0,39310.0,28630.0,2080.0,1028.0,1052.0,4790.0,1158.0,3632.0,77520.0,73918.0,1.15429,59.5299,0.385,1.0,19.2143,0.139,0.609712,1.115,4,8909.0,6425.0,3335.0,3090.0,3.0,0.0,3.0,617.0,324.0,293.0,58.0,35.0,23.0,896.0,402.0,494.0,158.0,44.0,114.0,17.0,8.0,9.0,394.0,232.0,162.0,83.0,47.0,36.0,258.0,68.0,190.0,4495.0,4414.0,0.208412,89715268.0,G,rs3933594,snp,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr4:g.89715268G>C,17.123564,4,True,CA101496231,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.577, 'alspac': 0.887, 'dbgap_popfreq': 0.809, 'estonian': 0.919, 'genome_dk': 0.95, 'gnomad': 0.726, 'gonl': 0.881, 'korean': 0.421, 'northernsweden': 0.898, 'qatari': 0.648, 'sgdp_prj': 0.29, 'siberian': 0.455, 'tommo': 0.357, 'topmed': 0.7, 'twinsuk': 0.899}}, {'allele': 'A', 'freq': {'1000g': 0.423, 'alspac': 0.113, 'dbgap_popfreq': 0.191, 'estonian': 0.081, 'genome_dk': 0.05, 'gnomad': 0.274, 'gonl': 0.119, 'korean': 0.579, 'northernsweden': 0.102, 'qatari': 0.352, 'sgdp_prj': 0.71, 'siberian': 0.545, 'tommo': 0.643, 'topmed': 0.3, 'twinsuk': 0.101}}]",C,4,155.0,105377329.0,False,uncharacterized LOC105377329,"[{'refseq': 'XR_001741764.1', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_001741765.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_001741766.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938982.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938983.1', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_938984.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938985.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938986.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938987.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_938989.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,LOC105377329,89715268.0,89715268.0,G,rs3933594,snv,89715268.0,89715268.0,http://bit.ly/2suyRKt,,,,,intergenic_region,GPRIN3-SNCA,intergenic_region,GPRIN3-SNCA,GPRIN3-SNCA,n.89715268G>C,,,,MODIFIER,,,,C,89715268,G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr4:g.89776006T>C,17.12361,4,True,CA11864982,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.779, 'alspac': 0.785, 'dbgap_popfreq': 0.782, 'estonian': 0.797, 'genome_dk': 0.85, 'gnomad': 0.783, 'gonl': 0.813, 'korea1k': 0.913, 'korean': 0.901, 'northernsweden': 0.853, 'qatari': 0.801, 'sgdp_prj': 0.385, 'siberian': 0.438, 'tommo': 0.928, 'topmed': 0.781, 'twinsuk': 0.778, 'vietnamese': 0.771}}, {'allele': 'C', 'freq': {'1000g': 0.221, 'alspac': 0.215, 'dbgap_popfreq': 0.218, 'estonian': 0.203, 'genome_dk': 0.15, 'gnomad': 0.217, 'gonl': 0.187, 'korea1k': 0.087, 'korean': 0.099, 'northernsweden': 0.147, 'qatari': 0.199, 'sgdp_prj': 0.615, 'siberian': 0.562, 'tommo': 0.072, 'topmed': 0.219, 'twinsuk': 0.222, 'vietnamese': 0.229}}]",C,4,155.0,6622.0,False,synuclein alpha,"[{'hgvs': 'NM_000345.4:c.306+46240=', 'protein_product': {'refseq': 'NP_000336.1'}, 'refseq': 'NM_000345.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001146054.2:c.306+46240=', 'protein_product': {'refseq': 'NP_001139526.1'}, 'refseq': 'NM_001146054.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001146055.2:c.306+46240=', 'protein_product': {'refseq': 'NP_001139527.1'}, 'refseq': 'NM_001146055.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001375285.1:c.306+46240=', 'protein_product': {'refseq': 'NP_001362214.1'}, 'refseq': 'NM_001375285.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001375286.1:c.306+46240=', 'protein_product': {'refseq': 'NP_001362215.1'}, 'refseq': 'NM_001375286.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001375287.1:c.306+46240=', 'protein_product': {'refseq': 'NP_001362216.1'}, 'refseq': 'NM_001375287.1', 'so': [{'accession': 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'protein_coding'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2008-05-26T16:35Z,rs61046392,130.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr4:g.89790619T>C,17.123734,4,True,CA15300315,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.493, 'alspac': 0.607, 'dbgap_popfreq': 0.572, 'estonian': 0.606, 'genome_dk': 0.575, 'gnomad': 0.545, 'gonl': 0.621, 'hapmap': 0.455, 'korean': 0.456, 'northernsweden': 0.577, 'prjeb37584': 0.442, 'qatari': 0.5, 'sgdp_prj': 0.298, 'siberian': 0.342, 'tommo': 0.397, 'topmed': 0.531, 'twinsuk': 0.607, 'vietnamese': 0.556}}, {'allele': 'C', 'freq': {'1000g': 0.507, 'alspac': 0.393, 'dbgap_popfreq': 0.428, 'estonian': 0.394, 'genome_dk': 0.425, 'gnomad': 0.455, 'gonl': 0.379, 'hapmap': 0.545, 'korean': 0.544, 'northernsweden': 0.423, 'prjeb37584': 0.558, 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18606870, 19063963, 19771175, 21060011, 25656566, 30410434]","[{'effect': 'intron_variant', 'feature_id': 'NM_000345.3', 'feature_type': 'transcript', 'gene_id': 'SNCA', 'genename': 'SNCA', 'hgvs_c': 'c.306+31627A>G', 'putative_impact': 'MODIFIER', 'rank': '4', 'total': '5', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_001146054.1', 'feature_type': 'transcript', 'gene_id': 'SNCA', 'genename': 'SNCA', 'hgvs_c': 'c.306+31627A>G', 'putative_impact': 'MODIFIER', 'rank': '4', 'total': '5', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_007308.2', 'feature_type': 'transcript', 'gene_id': 'SNCA', 'genename': 'SNCA', 'hgvs_c': 'c.306+31627A>G', 'putative_impact': 'MODIFIER', 'rank': '4', 'total': '4', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_001146055.1', 'feature_type': 'transcript', 'gene_id': 'SNCA', 'genename': 'SNCA', 'hgvs_c': 'c.306+31627A>G', 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0.098, 'dbgap_popfreq': 0.114, 'estonian': 0.087, 'genome_dk': 0.175, 'gnomad': 0.133, 'gonl': 0.152, 'hapmap': 0.146, 'hgdp_stanford': 0.138, 'korean': 0.215, 'northernsweden': 0.138, 'page_study': 0.155, 'prjeb36033': 0.152, 'prjeb37584': 0.117, 'qatari': 0.139, 'sgdp_prj': 0.553, 'siberian': 0.5, 'tommo': 0.23, 'topmed': 0.134, 'twinsuk': 0.121, 'vietnamese': 0.104}}, {'allele': 'T', 'freq': {'dbgap_popfreq': 0.0}}]",G,6,155.0,102725019.0,False,uncharacterized LOC102725019,"[{'refseq': 'XR_001743875.2', 'so': [{'accession': 'SO:0001986', 'name': 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'2012-05-4T12:46Z', 'rsid': 'rs116714509', 'rv': 137}, {'date': '2010-08-16T13:01Z', 'rsid': 'rs117734258', 'rv': 132}]",,,,,,,,,,"[{'accession': 'SO:0001636', 'name': '2KB_upstream_variant'}]",,,,,,,,,,,,,,,,,,,,, +chr6:g.40783137A>T,17.123592,6,True,CA138040988,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.935, 'alspac': 0.987, 'dbgap_popfreq': 0.988, 'estonian': 0.994, 'gnomad': 0.987, 'gonl': 0.989, 'korea1k': 0.854, 'korean': 0.867, 'northernsweden': 0.997, 'qatari': 0.986, 'sgdp_prj': 0.449, 'tommo': 0.854, 'topmed': 0.984, 'twinsuk': 0.984, 'vietnamese': 0.87}}, {'allele': 'T', 'freq': {'1000g': 0.065, 'alspac': 0.013, 'dbgap_popfreq': 0.012, 'estonian': 0.006, 'gnomad': 0.013, 'gonl': 0.011, 'korea1k': 0.146, 'korean': 0.133, 'northernsweden': 0.003, 'qatari': 0.014, 'sgdp_prj': 0.551, 'tommo': 0.146, 'topmed': 0.016, 'twinsuk': 0.016, 'vietnamese': 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+chr6:g.40897501T>C,17.123388,6,True,CA138109783,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.999, 'alspac': 0.997, 'dbgap_popfreq': 0.998, 'estonian': 0.999, 'gnomad': 0.998, 'gonl': 0.999, 'northernsweden': 0.998, 'sgdp_prj': 0.5, 'topmed': 0.998, 'twinsuk': 0.995}}, {'allele': 'C', 'freq': {'1000g': 0.001, 'alspac': 0.003, 'dbgap_popfreq': 0.002, 'estonian': 0.001, 'gnomad': 0.002, 'gonl': 0.001, 'northernsweden': 0.002, 'sgdp_prj': 0.5, 'topmed': 0.002, 'twinsuk': 0.005}}]",C,6,155.0,101929555.0,False,uncharacterized LOC101929555,"[{'refseq': 'NR_110873.1', 'so': [{'accession': 'SO:0001627', 'name': 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-1.5]",C,10.0,0.4638,0.185,rs143332484,0.20381,"['T', 'T', 'T']","[0.2, 0.36, 0.941]",0.48336,"['D', 'T', 'T']","[0.049, 0.075, 0.051]",0.08992,3.9825,0.0,0.2756,0.3533,0.3711,"[1, 1, 1]",,,,,"[{'acc': 'Q9NZC2-3', 'entry': 'TREM2_HUMAN'}, {'acc': 'Q9NZC2', 'entry': 'TREM2_HUMAN'}, {'acc': 'Q9NZC2-2', 'entry': 'TREM2_HUMAN'}]",YES,0.45237,"[0.412, 0.39, 0.389]","['C', 'C']",http://bit.ly/2AqoLOc,"[{'allele': 'C', 'freq': {'1000g': 0.995, 'alspac': 0.989, 'dbgap_popfreq': 0.99, 'estonian': 0.981, 'exac': 0.992, 'finrisk': 0.997, 'genome_dk': 0.975, 'gnomad': 0.993, 'gnomad_exomes': 0.992, 'goesp': 0.992, 'gonl': 0.991, 'mgp': 0.989, 'northernsweden': 0.973, 'page_study': 0.995, 'qatari': 0.995, 'sgdp_prj': 0.5, 'topmed': 0.993, 'twinsuk': 0.993}}, {'allele': 'A', 'freq': {'dbgap_popfreq': 0.0, 'topmed': 0.0}}, {'allele': 'T', 'freq': {'1000g': 0.005, 'alspac': 0.011, 'dbgap_popfreq': 0.01, 'estonian': 0.019, 'exac': 0.008, 'finrisk': 0.003, 'genome_dk': 0.025, 'gnomad': 0.007, 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0.011, 'northernsweden': 0.027, 'page_study': 0.005, 'qatari': 0.005, 'sgdp_prj': 0.5, 'topmed': 0.007, 'twinsuk': 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'NM_018965.4:c.185G>A']","['LRG_631:g.6716G>A', 'NC_000006.11:g.41129207C>T', 'NC_000006.12:g.41161469C>T', 'NG_011561.1:g.6716G>A']","['LRG_631p1:p.Arg62His', 'NP_001258750.1:p.Arg62His', 'NP_061838.1:p.Arg62His', 'NP_061838.1:p.Arg62His']",,,,,,,,,,,,C,rs143332484,single nucleotide variant,445645.0,C,Conflicting_interpretations_of_pathogenicity,445645,NC_000006.12:g.41161469C>T,"['C4721893', 'CN169374', 'CN517202']",,"criteria_provided,_conflicting_interpretations","['Polycystic_lipomembranous_osteodysplasia_with_sclerosing_leukoencephalopathy_1', 'not_specified', 'not_provided']",Immunoglobulin V-set domain,0.1646,0.595797,N,0.206924,0.21365,0.190490138876,,,,,,,,,,,,,"[{'accession': 'RCV000513870', 'clinical_significance': 'Conflicting interpretations of pathogenicity', 'conditions': {'identifiers': {'medgen': 'CN517202'}, 'name': 'not provided', 'synonyms': ['none provided']}, 'last_evaluated': '2021-12-02', 'number_submitters': 5, 'origin': 'germline', 'preferred_name': 'NM_018965.4(TREM2):c.185G>A (p.Arg62His)', 'review_status': 'criteria provided, conflicting interpretations'}, {'accession': 'RCV000591525', 'clinical_significance': 'Benign', 'conditions': {'identifiers': {'medgen': 'CN169374'}, 'name': 'not specified', 'synonyms': ['AllHighlyPenetrant']}, 'last_evaluated': '2017-01-25', 'number_submitters': 2, 'origin': 'germline', 'preferred_name': 'NM_018965.4(TREM2):c.185G>A (p.Arg62His)', 'review_status': 'criteria provided, single submitter'}, {'accession': 'RCV000625434', 'clinical_significance': 'Benign', 'conditions': {'identifiers': {'medgen': 'C4721893', 'mondo': 'MONDO:0020749', 'omim': '221770', 'orphanet': '2770'}, 'name': 'Polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy 1 (PLOSL1)'}, 'last_evaluated': '2015-09-21', 'number_submitters': 2, 'origin': 'germline', 'preferred_name': 'NM_018965.4(TREM2):c.185G>A (p.Arg62His)', 'review_status': 'criteria provided, single submitter'}]",221770,,http://bit.ly/2RieoY1,Benign,01/25/2017,p.Arg62His | p.R62H,NM_018965.3:c.185G>A,Ex2,TREM2,"['LRG_631t1:c.185G>A', 'NM_001271821.1:c.185G>A', 'NM_018965.2:c.185G>A', 'NM_018965.3:c.185G>A', 'XM_005249185.1:c.275G>A']",58720.0,12.0,101.0,89.0,,,,0.0,,0.0,,0.0,,,,,,,,,,,"[{'geneid': 54209, 'is_pseudo': False, 'name': 'triggering receptor expressed on myeloid cells 2', 'rnas': [{'codon_aligned_transcript_change': {'deleted_sequence': 'CGT', 'inserted_sequence': 'CGT', 'position': 217, 'seq_id': 'NM_001271821.2'}, 'hgvs': 'NM_001271821.2:c.185=', 'protein': {'variant': {'spdi': {'deleted_sequence': 'R', 'inserted_sequence': 'R', 'position': 61, 'seq_id': 'NP_001258750.1'}}}, 'protein_product': {'refseq': 'NP_001258750.1'}, 'refseq': 'NM_001271821.2', 'so': [{'accession': 'SO:0001580', 'name': 'coding_sequence_variant'}]}, {'codon_aligned_transcript_change': {'deleted_sequence': 'CGT', 'inserted_sequence': 'CGT', 'position': 217, 'seq_id': 'NM_018965.4'}, 'hgvs': 'NM_018965.4:c.185=', 'protein': {'variant': {'spdi': {'deleted_sequence': 'R', 'inserted_sequence': 'R', 'position': 61, 'seq_id': 'NP_061838.1'}}}, 'protein_product': {'refseq': 'NP_061838.1'}, 'refseq': 'NM_018965.4', 'so': [{'accession': 'SO:0001580', 'name': 'coding_sequence_variant'}]}], 'strand': '-', 'symbol': 'TREM2'}, {'geneid': 105375056, 'is_pseudo': False, 'name': 'uncharacterized LOC105375056', 'rnas': [{'refseq': 'XR_926795.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'refseq': 'XR_926797.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}], 'strand': '+', 'symbol': 'LOC105375056'}]",,,,,,,,,19.1+/-41.9,,,12.0,101.0,89.0,,,,,,,,,,,,,,,,,, +chr6:g.47416154A>G,17.123701,6,True,CA16263882,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.872, 'alspac': 0.787, 'dbgap_popfreq': 0.833, 'estonian': 0.813, 'genome_dk': 0.85, 'gnomad': 0.859, 'gonl': 0.787, 'hapmap': 0.855, 'korean': 0.878, 'northernsweden': 0.767, 'prjeb36033': 0.6, 'qatari': 0.977, 'sgdp_prj': 0.405, 'siberian': 0.5, 'tommo': 0.858, 'topmed': 0.861, 'twinsuk': 0.784, 'vietnamese': 0.819}}, {'allele': 'G', 'freq': {'1000g': 0.128, 'alspac': 0.213, 'dbgap_popfreq': 0.167, 'estonian': 0.187, 'genome_dk': 0.15, 'gnomad': 0.141, 'gonl': 0.213, 'hapmap': 0.145, 'korean': 0.122, 'northernsweden': 0.233, 'prjeb36033': 0.4, 'qatari': 0.023, 'sgdp_prj': 0.595, 'siberian': 0.5, 'tommo': 0.142, 'topmed': 0.139, 'twinsuk': 0.216, 'vietnamese': 0.181}}]",G,6,155.0,,,,,,,47416154.0,47416154.0,A,rs13207334,snv,47416154.0,47416154.0,http://bit.ly/2suyRKt,,,,,intergenic_region,TNFRSF21-CD2AP,intergenic_region,TNFRSF21-CD2AP,TNFRSF21-CD2AP,n.47416154A>G,,,,MODIFIER,,,,G,47416154,A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,21737.0,1577.0,858.0,719.0,107.0,52.0,55.0,2219.0,972.0,1247.0,528.0,248.0,280.0,756.0,333.0,423.0,1420.0,364.0,1056.0,28.0,14.0,14.0,14007.0,8108.0,5899.0,314.0,157.0,157.0,781.0,208.0,573.0,11314.0,10423.0,0.142892,0.0380679,0.0387499,0.0372848,0.117325,0.110638,0.124434,0.14528,0.143194,0.146948,0.152074,0.132762,0.174564,0.145665,0.146438,0.145062,0.134089,0.141745,0.131638,0.0886076,0.0853659,0.0921053,0.205925,0.20608,0.205712,0.149952,0.151838,0.148113,0.161765,0.178388,0.156472,0.145391,0.140275,G,G,152122.0,41426.0,22142.0,19284.0,912.0,470.0,442.0,15274.0,6788.0,8486.0,3472.0,1868.0,1604.0,5190.0,2274.0,2916.0,10590.0,2568.0,8022.0,316.0,164.0,152.0,68020.0,39344.0,28676.0,2094.0,1034.0,1060.0,4828.0,1166.0,3662.0,77818.0,74304.0,0.0,59.9977,-0.015,1.0,15.0535,0.353,0.67708,22.6411,6,1983.0,38.0,21.0,17.0,6.0,1.0,5.0,174.0,73.0,101.0,36.0,12.0,24.0,55.0,23.0,32.0,95.0,28.0,67.0,2.0,1.0,1.0,1482.0,868.0,614.0,28.0,14.0,14.0,67.0,19.0,48.0,1060.0,923.0,0.0467947,47416154.0,A,rs13207334,snp,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr6:g.47440244T>C,17.123331,6,True,CA12235729,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.699, 'alspac': 0.525, 'dbgap_popfreq': 0.59, 'estonian': 0.593, 'genome_dk': 0.525, 'gnomad': 0.613, 'gonl': 0.482, 'korea1k': 0.792, 'korean': 0.777, 'northernsweden': 0.552, 'qatari': 0.435, 'sgdp_prj': 0.376, 'siberian': 0.361, 'tommo': 0.805, 'topmed': 0.634, 'twinsuk': 0.525, 'vietnamese': 0.865}}, {'allele': 'C', 'freq': {'1000g': 0.301, 'alspac': 0.475, 'dbgap_popfreq': 0.41, 'estonian': 0.407, 'genome_dk': 0.475, 'gnomad': 0.387, 'gonl': 0.518, 'korea1k': 0.208, 'korean': 0.223, 'northernsweden': 0.448, 'qatari': 0.565, 'sgdp_prj': 0.624, 'siberian': 0.639, 'tommo': 0.195, 'topmed': 0.366, 'twinsuk': 0.475, 'vietnamese': 0.135}}]",C,6,155.0,,,,,,,47440244.0,47440244.0,T,rs9395259,snv,47440244.0,47440244.0,http://bit.ly/2suyRKt,,,,,intergenic_region,TNFRSF21-CD2AP,intergenic_region,TNFRSF21-CD2AP,TNFRSF21-CD2AP,n.47440244T>C,,,,MODIFIER,,,,C,47440244,T,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,58621.0,9677.0,5192.0,4485.0,541.0,277.0,264.0,4980.0,2199.0,2781.0,1730.0,970.0,760.0,910.0,429.0,481.0,5417.0,1308.0,4109.0,174.0,93.0,81.0,32375.0,18781.0,13594.0,864.0,408.0,456.0,1953.0,471.0,1482.0,30128.0,28493.0,0.386825,0.234696,0.235443,0.233837,0.59713,0.594421,0.6,0.327373,0.325778,0.328646,0.498847,0.520386,0.473815,0.176357,0.189153,0.166321,0.516594,0.513344,0.517637,0.550633,0.567073,0.532895,0.476987,0.478131,0.475414,0.416586,0.397661,0.435115,0.405523,0.404639,0.405805,0.388338,0.385238,C,C,151544.0,41232.0,22052.0,19180.0,906.0,466.0,440.0,15212.0,6750.0,8462.0,3468.0,1864.0,1604.0,5160.0,2268.0,2892.0,10486.0,2548.0,7938.0,316.0,164.0,152.0,67874.0,39280.0,28594.0,2074.0,1026.0,1048.0,4816.0,1164.0,3652.0,77582.0,73962.0,1.44649e-15,59.9111,0.0,1.0,18.7087,0.356,0.691604,7.1005,6,12417.0,1135.0,618.0,517.0,155.0,73.0,82.0,875.0,387.0,488.0,420.0,246.0,174.0,87.0,43.0,44.0,1397.0,346.0,1051.0,47.0,26.0,21.0,7693.0,4494.0,3199.0,199.0,93.0,106.0,409.0,87.0,322.0,6413.0,6004.0,0.0609346,47440244.0,T,rs9395259,snp,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2008-05-23T18:48Z,rs57183216,130.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr6:g.47557466G>C,17.12373,6,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.767, 'alspac': 0.723, 'dbgap_popfreq': 0.859, 'estonian': 0.739, 'gnomad': 0.723, 'gonl': 0.726, 'korea1k': 0.897, 'korean': 0.898, 'northernsweden': 0.715, 'qatari': 0.856, 'sgdp_prj': 0.42, 'siberian': 0.5, 'tommo': 0.873, 'topmed': 0.723, 'twinsuk': 0.725}}, {'allele': 'A', 'freq': {'1000g': 0.233, 'alspac': 0.277, 'dbgap_popfreq': 0.141, 'estonian': 0.261, 'gnomad': 0.277, 'gonl': 0.274, 'korea1k': 0.103, 'korean': 0.102, 'northernsweden': 0.285, 'qatari': 0.144, 'sgdp_prj': 0.58, 'siberian': 0.5, 'tommo': 0.127, 'topmed': 0.277, 'twinsuk': 0.275}}, {'allele': 'C', 'freq': {'dbgap_popfreq': 0.0}}]",C,6,155.0,23607.0,False,CD2 associated protein,"[{'hgvs': 'NM_012120.3:c.541+2700=', 'protein_product': {'refseq': 'NP_036252.1'}, 'refseq': 'NM_012120.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_005248976.1:c.541+2700=', 'protein_product': {'refseq': 'XP_005249033.1'}, 'refseq': 'XM_005248976.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011514449.2:c.394+2700=', 'protein_product': {'refseq': 'XP_011512751.1'}, 'refseq': 'XM_011514449.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_017010641.1:c.541+2700=', 'protein_product': {'refseq': 'XP_016866130.1'}, 'refseq': 'XM_017010641.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,CD2AP,47557466.0,47557466.0,G,rs6931011,snv,47557466.0,47557466.0,http://bit.ly/2suyRKt,,,,,intron_variant,NM_012120.2,transcript,CD2AP,CD2AP,c.541+2700G>C,,,,MODIFIER,5,17,protein_coding,C,47557466,G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'date': '2004-10-8T05:04Z', 'rsid': 'rs13212925', 'rv': 123}, {'date': '2006-10-16T13:14Z', 'rsid': 'rs35397598', 'rv': 127}, {'date': '2008-05-27T02:40Z', 'rsid': 'rs61444015', 'rv': 130}, {'date': '2014-08-21T16:14Z', 'rsid': 'rs112215255', 'rv': 142}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr6:g.47557466G>A,17.123728,6,True,CA15456814,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.767, 'alspac': 0.723, 'dbgap_popfreq': 0.859, 'estonian': 0.739, 'gnomad': 0.723, 'gonl': 0.726, 'korea1k': 0.897, 'korean': 0.898, 'northernsweden': 0.715, 'qatari': 0.856, 'sgdp_prj': 0.42, 'siberian': 0.5, 'tommo': 0.873, 'topmed': 0.723, 'twinsuk': 0.725}}, {'allele': 'A', 'freq': {'1000g': 0.233, 'alspac': 0.277, 'dbgap_popfreq': 0.141, 'estonian': 0.261, 'gnomad': 0.277, 'gonl': 0.274, 'korea1k': 0.103, 'korean': 0.102, 'northernsweden': 0.285, 'qatari': 0.144, 'sgdp_prj': 0.58, 'siberian': 0.5, 'tommo': 0.127, 'topmed': 0.277, 'twinsuk': 0.275}}, {'allele': 'C', 'freq': {'dbgap_popfreq': 0.0}}]",A,6,155.0,23607.0,False,CD2 associated protein,"[{'hgvs': 'NM_012120.3:c.541+2700=', 'protein_product': {'refseq': 'NP_036252.1'}, 'refseq': 'NM_012120.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_005248976.1:c.541+2700=', 'protein_product': {'refseq': 'XP_005249033.1'}, 'refseq': 'XM_005248976.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011514449.2:c.394+2700=', 'protein_product': {'refseq': 'XP_011512751.1'}, 'refseq': 'XM_011514449.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_017010641.1:c.541+2700=', 'protein_product': {'refseq': 'XP_016866130.1'}, 'refseq': 'XM_017010641.1', 'so': [{'accession': 'SO:0001627', 'name': 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'protein_coding'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2004-02-27T12:48Z,rs10358256,120.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr7:g.100240485T>C,17.123756,7,True,CA12569419,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.83, 'alspac': 0.794, 'dbgap_popfreq': 0.808, 'genome_dk': 0.775, 'gnomad': 0.825, 'gonl': 0.796, 'korea1k': 0.836, 'korean': 0.832, 'northernsweden': 0.708, 'qatari': 0.801, 'sgdp_prj': 0.455, 'siberian': 0.5, 'tommo': 0.747, 'topmed': 0.833, 'twinsuk': 0.797, 'vietnamese': 0.898}}, {'allele': 'C', 'freq': {'1000g': 0.17, 'alspac': 0.206, 'dbgap_popfreq': 0.192, 'genome_dk': 0.225, 'gnomad': 0.175, 'gonl': 0.204, 'korea1k': 0.164, 'korean': 0.168, 'northernsweden': 0.292, 'qatari': 0.199, 'sgdp_prj': 0.545, 'siberian': 0.5, 'tommo': 0.253, 'topmed': 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0.382}}]",C,7,155.0,,,,,,,143407238.0,143407238.0,G,rs3935067,snv,143407238.0,143407238.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,C,143407238,G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,40619.0,4715.0,2499.0,2216.0,292.0,147.0,145.0,3776.0,1638.0,2138.0,1342.0,724.0,618.0,157.0,72.0,85.0,2630.0,688.0,1942.0,122.0,68.0,54.0,25319.0,14661.0,10658.0,651.0,316.0,335.0,1615.0,419.0,1196.0,21232.0,19387.0,0.267434,0.114043,0.113087,0.115141,0.320879,0.314103,0.328054,0.247509,0.241878,0.252004,0.386967,0.387996,0.385768,0.0302855,0.0317181,0.0291695,0.248912,0.267704,0.242871,0.388535,0.419753,0.355263,0.372623,0.372902,0.372241,0.313282,0.306796,0.319656,0.335341,0.359966,0.327492,0.2732,0.261393,C,C,151884.0,41344.0,22098.0,19246.0,910.0,468.0,442.0,15256.0,6772.0,8484.0,3468.0,1866.0,1602.0,5184.0,2270.0,2914.0,10566.0,2570.0,7996.0,314.0,162.0,152.0,67948.0,39316.0,28632.0,2078.0,1030.0,1048.0,4816.0,1164.0,3652.0,77716.0,74168.0,0.0,59.9974,-0.014,1.0,16.844,0.318,0.696278,22.3867,7,6611.0,295.0,153.0,142.0,50.0,24.0,26.0,510.0,229.0,281.0,262.0,141.0,121.0,3.0,3.0,0.0,320.0,85.0,235.0,26.0,16.0,10.0,4754.0,2748.0,2006.0,112.0,48.0,64.0,279.0,73.0,206.0,3520.0,3091.0,0.0798037,143407238.0,G,rs3935067,snp,33516273,"[{'distance_to_feature': 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+chr8:g.16840070T>G,17.123661,8,True,CA12754385,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.625, 'alspac': 0.71, 'dbgap_popfreq': 0.764, 'estonian': 0.666, 'genome_dk': 0.75, 'gnomad': 0.705, 'hapmap': 0.663, 'korea1k': 0.586, 'korean': 0.566, 'northernsweden': 0.738, 'qatari': 0.745, 'sgdp_prj': 0.351, 'siberian': 0.4, 'tommo': 0.631, 'topmed': 0.702, 'twinsuk': 0.711, 'vietnamese': 0.533}}, {'allele': 'A', 'freq': {'dbgap_popfreq': 0.0}}, {'allele': 'C', 'freq': {'korean': 0.0}}, {'allele': 'G', 'freq': {'1000g': 0.375, 'alspac': 0.29, 'dbgap_popfreq': 0.236, 'estonian': 0.334, 'genome_dk': 0.25, 'gnomad': 0.295, 'hapmap': 0.337, 'korea1k': 0.414, 'korean': 0.434, 'northernsweden': 0.262, 'qatari': 0.255, 'sgdp_prj': 0.649, 'siberian': 0.6, 'tommo': 0.369, 'topmed': 0.298, 'twinsuk': 0.289, 'vietnamese': 0.467}}]",G,8,155.0,105379297.0,False,uncharacterized LOC105379297,"[{'refseq': 'XR_949524.1', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_949525.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",-,LOC105379297,16840070.0,16840070.0,T,rs620490,snv,16840070.0,16840070.0,http://bit.ly/2suyRKt,,,,,intergenic_region,MSR1-FGF20,intergenic_region,MSR1-FGF20,MSR1-FGF20,n.16840070T>G,,,,MODIFIER,,,,G,16840070,T,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,46170.0,11901.0,6268.0,5633.0,214.0,121.0,93.0,4615.0,2075.0,2540.0,894.0,475.0,419.0,2133.0,921.0,1212.0,3500.0,850.0,2650.0,90.0,50.0,40.0,19647.0,11268.0,8379.0,585.0,273.0,312.0,2591.0,636.0,1955.0,22937.0,23233.0,0.304475,0.288271,0.284134,0.293019,0.235165,0.258547,0.210407,0.303459,0.307044,0.300592,0.257488,0.254283,0.261222,0.414497,0.408245,0.419377,0.333524,0.331772,0.33409,0.28481,0.304878,0.263158,0.289318,0.286791,0.292788,0.279637,0.264535,0.29434,0.538894,0.548276,0.53591,0.295511,0.313875,G,G,151638.0,41284.0,22060.0,19224.0,910.0,468.0,442.0,15208.0,6758.0,8450.0,3472.0,1868.0,1604.0,5146.0,2256.0,2890.0,10494.0,2562.0,7932.0,316.0,164.0,152.0,67908.0,39290.0,28618.0,2092.0,1032.0,1060.0,4808.0,1160.0,3648.0,77618.0,74020.0,0.0,59.9971,-0.03,1.0,23.6304,0.343,0.694015,22.4434,8,7266.0,1724.0,874.0,850.0,22.0,13.0,9.0,724.0,312.0,412.0,133.0,68.0,65.0,430.0,188.0,242.0,575.0,138.0,437.0,9.0,4.0,5.0,2861.0,1629.0,1232.0,76.0,37.0,39.0,712.0,178.0,534.0,3441.0,3825.0,0.0184926,16840070.0,T,rs620490,snp,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2008-05-23T19:42Z,rs57239093,130.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr8:g.16840070T>C,16.612244,8,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.625, 'alspac': 0.71, 'dbgap_popfreq': 0.764, 'estonian': 0.666, 'genome_dk': 0.75, 'gnomad': 0.705, 'hapmap': 0.663, 'korea1k': 0.586, 'korean': 0.566, 'northernsweden': 0.738, 'qatari': 0.745, 'sgdp_prj': 0.351, 'siberian': 0.4, 'tommo': 0.631, 'topmed': 0.702, 'twinsuk': 0.711, 'vietnamese': 0.533}}, {'allele': 'A', 'freq': {'dbgap_popfreq': 0.0}}, {'allele': 'C', 'freq': {'korean': 0.0}}, {'allele': 'G', 'freq': {'1000g': 0.375, 'alspac': 0.29, 'dbgap_popfreq': 0.236, 'estonian': 0.334, 'genome_dk': 0.25, 'gnomad': 0.295, 'hapmap': 0.337, 'korea1k': 0.414, 'korean': 0.434, 'northernsweden': 0.262, 'qatari': 0.255, 'sgdp_prj': 0.649, 'siberian': 0.6, 'tommo': 0.369, 'topmed': 0.298, 'twinsuk': 0.289, 'vietnamese': 0.467}}]",C,8,155.0,105379297.0,False,uncharacterized LOC105379297,"[{'refseq': 'XR_949524.1', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_949525.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",-,LOC105379297,16840070.0,16840070.0,T,rs620490,snv,16840070.0,16840070.0,http://bit.ly/2suyRKt,,,,,intergenic_region,MSR1-FGF20,intergenic_region,MSR1-FGF20,MSR1-FGF20,n.16840070T>C,,,,MODIFIER,,,,C,16840070,T,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2008-05-23T19:42Z,rs57239093,130.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr8:g.16840070T>A,16.612244,8,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.625, 'alspac': 0.71, 'dbgap_popfreq': 0.764, 'estonian': 0.666, 'genome_dk': 0.75, 'gnomad': 0.705, 'hapmap': 0.663, 'korea1k': 0.586, 'korean': 0.566, 'northernsweden': 0.738, 'qatari': 0.745, 'sgdp_prj': 0.351, 'siberian': 0.4, 'tommo': 0.631, 'topmed': 0.702, 'twinsuk': 0.711, 'vietnamese': 0.533}}, {'allele': 'A', 'freq': {'dbgap_popfreq': 0.0}}, {'allele': 'C', 'freq': {'korean': 0.0}}, {'allele': 'G', 'freq': {'1000g': 0.375, 'alspac': 0.29, 'dbgap_popfreq': 0.236, 'estonian': 0.334, 'genome_dk': 0.25, 'gnomad': 0.295, 'hapmap': 0.337, 'korea1k': 0.414, 'korean': 0.434, 'northernsweden': 0.262, 'qatari': 0.255, 'sgdp_prj': 0.649, 'siberian': 0.6, 'tommo': 0.369, 'topmed': 0.298, 'twinsuk': 0.289, 'vietnamese': 0.467}}]",A,8,155.0,105379297.0,False,uncharacterized LOC105379297,"[{'refseq': 'XR_949524.1', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_949525.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",-,LOC105379297,16840070.0,16840070.0,T,rs620490,snv,16840070.0,16840070.0,http://bit.ly/2suyRKt,,,,,intergenic_region,MSR1-FGF20,intergenic_region,MSR1-FGF20,MSR1-FGF20,n.16840070T>A,,,,MODIFIER,,,,A,16840070,T,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2008-05-23T19:42Z,rs57239093,130.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr8:g.27369273A>T,17.123585,8,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.585, 'alspac': 0.599, 'dbgap_popfreq': 0.605, 'estonian': 0.681, 'genome_dk': 0.525, 'gnomad': 0.574, 'gonl': 0.594, 'hapmap': 0.564, 'hgdp_stanford': 0.596, 'korean': 0.784, 'northernsweden': 0.603, 'prjeb36033': 0.706, 'qatari': 0.468, 'sgdp_prj': 0.336, 'siberian': 0.5, 'tommo': 0.821, 'topmed': 0.578, 'twinsuk': 0.601, 'vietnamese': 0.741}}, {'allele': 'C', 'freq': {'1000g': 0.415, 'alspac': 0.401, 'dbgap_popfreq': 0.395, 'estonian': 0.319, 'genome_dk': 0.475, 'gnomad': 0.426, 'gonl': 0.406, 'hapmap': 0.436, 'hgdp_stanford': 0.404, 'korean': 0.216, 'northernsweden': 0.397, 'prjeb36033': 0.294, 'qatari': 0.532, 'sgdp_prj': 0.664, 'siberian': 0.5, 'tommo': 0.179, 'topmed': 0.422, 'twinsuk': 0.399, 'vietnamese': 0.259}}, {'allele': 'T', 'freq': {'dbgap_popfreq': 0.0}}]",T,8,155.0,2185.0,False,protein tyrosine kinase 2 beta,"[{'hgvs': 'NM_004103.4:c.-37-28275=', 'protein_product': {'refseq': 'NP_004094.3'}, 'refseq': 'NM_004103.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_173174.3:c.-37-28275=', 'protein_product': {'refseq': 'NP_775266.1'}, 'refseq': 'NM_173174.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_173175.2:c.-37-28275=', 'protein_product': {'refseq': 'NP_775267.1'}, 'refseq': 'NM_173175.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_173176.3:c.-37-28275=', 'protein_product': {'refseq': 'NP_775268.1'}, 'refseq': 'NM_173176.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_005273504.1'}, 'refseq': 'XM_005273447.4', 'so': [{'accession': 'SO:0002153', 'name': 'genic_upstream_transcript_variant'}]}, {'hgvs': 'XM_005273448.5:c.-37-28275=', 'protein_product': {'refseq': 'XP_005273505.1'}, 'refseq': 'XM_005273448.5', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011544441.2:c.-37-28275=', 'protein_product': {'refseq': 'XP_011542743.1'}, 'refseq': 'XM_011544441.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011544442.3:c.-37-28275=', 'protein_product': {'refseq': 'XP_011542744.1'}, 'refseq': 'XM_011544442.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_017013214.1:c.-37-28275=', 'protein_product': {'refseq': 'XP_016868703.1'}, 'refseq': 'XM_017013214.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_017013215.1:c.-37-28275=', 'protein_product': {'refseq': 'XP_016868704.1'}, 'refseq': 'XM_017013215.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_017013216.2:c.-37-28275=', 'protein_product': {'refseq': 'XP_016868705.1'}, 'refseq': 'XM_017013216.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,PTK2B,27369273.0,27369273.0,A,rs755951,snv,27369273.0,27369273.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,T,27369273,A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'effect': 'intron_variant', 'feature_id': 'NM_004103.4', 'feature_type': 'transcript', 'gene_id': 'PTK2B', 'genename': 'PTK2B', 'hgvs_c': 'c.-37-28275A>T', 'putative_impact': 'MODIFIER', 'rank': '2', 'total': '31', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_173174.2', 'feature_type': 'transcript', 'gene_id': 'PTK2B', 'genename': 'PTK2B', 'hgvs_c': 'c.-37-28275A>T', 'putative_impact': 'MODIFIER', 'rank': '6', 'total': '35', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_173176.2', 'feature_type': 'transcript', 'gene_id': 'PTK2B', 'genename': 'PTK2B', 'hgvs_c': 'c.-37-28275A>T', 'putative_impact': 'MODIFIER', 'rank': '1', 'total': '30', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_173175.2', 'feature_type': 'transcript', 'gene_id': 'PTK2B', 'genename': 'PTK2B', 'hgvs_c': 'c.-37-28275A>T', 'putative_impact': 'MODIFIER', 'rank': '1', 'total': '29', 'transcript_biotype': 'protein_coding'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'date': '2008-05-25T07:46Z', 'rsid': 'rs59083544', 'rv': 130}, {'date': '2014-08-21T16:14Z', 'rsid': 'rs386611412', 'rv': 142}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr8:g.27369273A>C,17.123388,8,True,CA15561138,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.585, 'alspac': 0.599, 'dbgap_popfreq': 0.605, 'estonian': 0.681, 'genome_dk': 0.525, 'gnomad': 0.574, 'gonl': 0.594, 'hapmap': 0.564, 'hgdp_stanford': 0.596, 'korean': 0.784, 'northernsweden': 0.603, 'prjeb36033': 0.706, 'qatari': 0.468, 'sgdp_prj': 0.336, 'siberian': 0.5, 'tommo': 0.821, 'topmed': 0.578, 'twinsuk': 0.601, 'vietnamese': 0.741}}, {'allele': 'C', 'freq': {'1000g': 0.415, 'alspac': 0.401, 'dbgap_popfreq': 0.395, 'estonian': 0.319, 'genome_dk': 0.475, 'gnomad': 0.426, 'gonl': 0.406, 'hapmap': 0.436, 'hgdp_stanford': 0.404, 'korean': 0.216, 'northernsweden': 0.397, 'prjeb36033': 0.294, 'qatari': 0.532, 'sgdp_prj': 0.664, 'siberian': 0.5, 'tommo': 0.179, 'topmed': 0.422, 'twinsuk': 0.399, 'vietnamese': 0.259}}, {'allele': 'T', 'freq': {'dbgap_popfreq': 0.0}}]",C,8,155.0,2185.0,False,protein tyrosine kinase 2 beta,"[{'hgvs': 'NM_004103.4:c.-37-28275=', 'protein_product': {'refseq': 'NP_004094.3'}, 'refseq': 'NM_004103.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_173174.3:c.-37-28275=', 'protein_product': {'refseq': 'NP_775266.1'}, 'refseq': 'NM_173174.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_173175.2:c.-37-28275=', 'protein_product': {'refseq': 'NP_775267.1'}, 'refseq': 'NM_173175.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_173176.3:c.-37-28275=', 'protein_product': {'refseq': 'NP_775268.1'}, 'refseq': 'NM_173176.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_005273504.1'}, 'refseq': 'XM_005273447.4', 'so': [{'accession': 'SO:0002153', 'name': 'genic_upstream_transcript_variant'}]}, {'hgvs': 'XM_005273448.5:c.-37-28275=', 'protein_product': {'refseq': 'XP_005273505.1'}, 'refseq': 'XM_005273448.5', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011544441.2:c.-37-28275=', 'protein_product': {'refseq': 'XP_011542743.1'}, 'refseq': 'XM_011544441.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011544442.3:c.-37-28275=', 'protein_product': {'refseq': 'XP_011542744.1'}, 'refseq': 'XM_011544442.3', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_017013214.1:c.-37-28275=', 'protein_product': {'refseq': 'XP_016868703.1'}, 'refseq': 'XM_017013214.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_017013215.1:c.-37-28275=', 'protein_product': {'refseq': 'XP_016868704.1'}, 'refseq': 'XM_017013215.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_017013216.2:c.-37-28275=', 'protein_product': {'refseq': 'XP_016868705.1'}, 'refseq': 'XM_017013216.2', 'so': 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+chr14:g.52845284C>T,17.123585,14,True,CA13992034,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'C', 'freq': {'1000g': 0.861, 'alspac': 0.89, 'daghestan': 0.931, 'dbgap_popfreq': 0.903, 'estonian': 0.852, 'genome_dk': 0.9, 'gonl': 0.88, 'hapmap': 0.869, 'hgdp_stanford': 0.87, 'korea1k': 0.782, 'korean': 0.783, 'northernsweden': 0.897, 'prjeb36033': 1.0, 'qatari': 0.852, 'sgdp_prj': 0.476, 'siberian': 0.45, 'tommo': 0.771, 'topmed': 0.886, 'twinsuk': 0.9, 'vietnamese': 0.764}}, {'allele': 'G', 'freq': {'dbgap_popfreq': 0.0}}, {'allele': 'T', 'freq': {'1000g': 0.139, 'alspac': 0.11, 'daghestan': 0.069, 'dbgap_popfreq': 0.097, 'estonian': 0.148, 'genome_dk': 0.1, 'gonl': 0.12, 'hapmap': 0.131, 'hgdp_stanford': 0.13, 'korea1k': 0.218, 'korean': 0.217, 'northernsweden': 0.103, 'prjeb36033': 0.0, 'qatari': 0.148, 'sgdp_prj': 0.524, 'siberian': 0.55, 'tommo': 0.229, 'topmed': 0.114, 'twinsuk': 0.1, 'vietnamese': 0.236}}]",T,14,155.0,105370500.0,False,uncharacterized LOC105370500,"[{'refseq': 'XR_001750963.1', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_943867.2', 'so': [{'accession': 'SO:0001627', 'name': 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+chr14:g.52951121C>T,17.123796,14,True,CA260970401,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'C', 'freq': {'1000g': 0.99, 'alspac': 0.951, 'dbgap_popfreq': 0.962, 'estonian': 0.948, 'gnomad': 0.972, 'northernsweden': 0.958, 'sgdp_prj': 0.5, 'siberian': 0.5, 'topmed': 0.976, 'twinsuk': 0.957}}, {'allele': 'T', 'freq': {'1000g': 0.01, 'alspac': 0.049, 'dbgap_popfreq': 0.038, 'estonian': 0.052, 'gnomad': 0.028, 'northernsweden': 0.042, 'sgdp_prj': 0.5, 'siberian': 0.5, 'topmed': 0.024, 'twinsuk': 0.043}}]",T,14,155.0,10979.0,False,FERM domain containing kindlin 2,"[{'protein_product': {'refseq': 'NP_001128471.1'}, 'refseq': 'NM_001134999.2', 'so': [{'accession': 'SO:0001986', 'name': 'upstream_transcript_variant'}]}, {'protein_product': {'refseq': 'NP_001128472.1'}, 'refseq': 'NM_001135000.2', 'so': [{'accession': 'SO:0001986', 'name': 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'24', 'effect': 'upstream_gene_variant', 'feature_id': 'NM_001134999.1', 'feature_type': 'transcript', 'gene_id': 'FERMT2', 'genename': 'FERMT2', 'hgvs_c': 'c.-553G>A', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '24', 'effect': 'upstream_gene_variant', 'feature_id': 'NM_006832.2', 'feature_type': 'transcript', 'gene_id': 'FERMT2', 'genename': 'FERMT2', 'hgvs_c': 'c.-553G>A', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '24', 'effect': 'upstream_gene_variant', 'feature_id': 'NM_001135000.1', 'feature_type': 'transcript', 'gene_id': 'FERMT2', 'genename': 'FERMT2', 'hgvs_c': 'c.-553G>A', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'effect': 'intergenic_region', 'feature_id': 'FERMT2-DDHD1', 'feature_type': 'intergenic_region', 'gene_id': 'FERMT2-DDHD1', 'genename': 'FERMT2-DDHD1', 'hgvs_c': 'n.52951121C>T', 'putative_impact': 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'genename': 'FERMT2', 'hgvs_c': 'c.-553G>T', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '24', 'effect': 'upstream_gene_variant', 'feature_id': 'NM_001135000.1', 'feature_type': 'transcript', 'gene_id': 'FERMT2', 'genename': 'FERMT2', 'hgvs_c': 'c.-553G>T', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'effect': 'intergenic_region', 'feature_id': 'FERMT2-DDHD1', 'feature_type': 'intergenic_region', 'gene_id': 'FERMT2-DDHD1', 'genename': 'FERMT2-DDHD1', 'hgvs_c': 'n.52951121C>A', 'putative_impact': 'MODIFIER'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'accession': 'SO:0001636', 'name': '2KB_upstream_variant'}]",,,,,,,,,,,,,,,,,,,,, +chr14:g.92464101G>A,17.1237,14,True,CA14011662,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.754, 'alspac': 0.757, 'dbgap_popfreq': 0.777, 'estonian': 0.812, 'genome_dk': 0.825, 'gnomad': 0.771, 'gonl': 0.755, 'korea1k': 0.691, 'korean': 0.699, 'northernsweden': 0.775, 'qatari': 0.611, 'sgdp_prj': 0.429, 'siberian': 0.471, 'tommo': 0.695, 'topmed': 0.764, 'twinsuk': 0.755, 'vietnamese': 0.85}}, {'allele': 'A', 'freq': {'1000g': 0.246, 'alspac': 0.243, 'dbgap_popfreq': 0.223, 'estonian': 0.188, 'genome_dk': 0.175, 'gnomad': 0.229, 'gonl': 0.245, 'korea1k': 0.309, 'korean': 0.301, 'northernsweden': 0.225, 'qatari': 0.389, 'sgdp_prj': 0.571, 'siberian': 0.529, 'tommo': 0.305, 'topmed': 0.236, 'twinsuk': 0.245, 'vietnamese': 0.15}}]",A,14,155.0,123041.0,False,solute carrier family 24 member 4,"[{'hgvs': 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0.645}}]",C,17,155.0,4137.0,False,microtubule associated protein tau,"[{'hgvs': 'NM_001123066.4:c.1182+802=', 'protein_product': {'refseq': 'NP_001116538.2'}, 'refseq': 'NM_001123066.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001123067.4:c.342+802=', 'protein_product': {'refseq': 'NP_001116539.1'}, 'refseq': 'NM_001123067.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001203251.2:c.342+802=', 'protein_product': {'refseq': 'NP_001190180.1'}, 'refseq': 'NM_001203251.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001203252.2:c.429+802=', 'protein_product': {'refseq': 'NP_001190181.1'}, 'refseq': 'NM_001203252.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001377265.1:c.1407+802=', 'protein_product': {'refseq': 'NP_001364194.1'}, 'refseq': 'NM_001377265.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 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'transcript_biotype': 'protein_coding'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'date': '2006-05-23T13:27Z', 'rsid': 'rs10300864', 'rv': 127}, {'date': '2008-05-24T21:23Z', 'rsid': 'rs58572319', 'rv': 130}, {'date': '2009-02-27T00:27Z', 'rsid': 'rs58883547', 'rv': 130}, {'date': '2014-08-21T16:14Z', 'rsid': 'rs111179446', 'rv': 142}, {'date': '2012-05-4T12:46Z', 'rsid': 'rs114077443', 'rv': 137}, {'date': '2010-08-16T13:01Z', 'rsid': 'rs116911805', 'rv': 132}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr17:g.46006582T>A,17.123602,17,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.691, 'alspac': 0.614, 'dbgap_popfreq': 0.702, 'estonian': 0.671, 'genome_dk': 0.625, 'gonl': 0.594, 'hapmap': 0.688, 'korea1k': 0.809, 'korean': 0.587, 'northernsweden': 0.712, 'qatari': 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0.0}}]",C,18,155.0,6014.0,False,Ras like without CAAX 2,"[{'hgvs': 'NM_001272077.2:c.103+22418=', 'protein_product': {'refseq': 'NP_001259006.1'}, 'refseq': 'NM_001272077.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_002930.4:c.103+22418=', 'protein_product': {'refseq': 'NP_002921.1'}, 'refseq': 'NM_002930.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",-,RIT2,43092999.0,43092999.0,G,rs4588066,snv,43092999.0,43092999.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,C,43092999,G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'effect': 'intron_variant', 'feature_id': 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'intron_variant'}]}]",+,CBLC,44794671.0,44794671.0,A,rs2889414,snv,44794671.0,44794671.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,C,44794671,A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'effect': 'intron_variant', 'feature_id': 'NM_012116.3', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1362+390A>C', 'putative_impact': 'MODIFIER', 'rank': '9', 'total': '10', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_001130852.1', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1224+390A>C', 'putative_impact': 'MODIFIER', 'rank': '8', 'total': '9', 'transcript_biotype': 'protein_coding'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2003-02-20T13:15Z,rs2965116,111.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr19:g.44794671A>T,17.123388,19,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 0.545, 'alspac': 0.65, 'dbgap_popfreq': 0.606, 'estonian': 0.626, 'genome_dk': 0.675, 'gnomad': 0.558, 'gonl': 0.646, 'korea1k': 0.62, 'korean': 0.615, 'northernsweden': 0.582, 'qatari': 0.662, 'sgdp_prj': 0.358, 'siberian': 0.289, 'tommo': 0.658, 'topmed': 0.548, 'twinsuk': 0.652}}, {'allele': 'C', 'freq': {'dbgap_popfreq': 0.0}}, {'allele': 'G', 'freq': {'1000g': 0.455, 'alspac': 0.35, 'dbgap_popfreq': 0.394, 'estonian': 0.374, 'genome_dk': 0.325, 'gnomad': 0.442, 'gonl': 0.354, 'korea1k': 0.38, 'korean': 0.385, 'northernsweden': 0.418, 'qatari': 0.338, 'sgdp_prj': 0.642, 'siberian': 0.711, 'tommo': 0.342, 'topmed': 0.452, 'twinsuk': 0.348}}, {'allele': 'T', 'freq': {'dbgap_popfreq': 0.0}}]",T,19,155.0,23624.0,False,Cbl proto-oncogene C,"[{'hgvs': 'NM_001130852.1:c.1224+390=', 'protein_product': {'refseq': 'NP_001124324.1'}, 'refseq': 'NM_001130852.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_012116.4:c.1362+390=', 'protein_product': {'refseq': 'NP_036248.3'}, 'refseq': 'NM_012116.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_005258753.1'}, 'refseq': 'XM_005258696.3', 'so': [{'accession': 'SO:0001987', 'name': 'downstream_transcript_variant'}, {'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'hgvs': 'XM_011526688.2:c.1362+390=', 'protein_product': {'refseq': 'XP_011524990.1'}, 'refseq': 'XM_011526688.2', 'so': [{'accession': 'SO:0001627', 'name': 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'intron_variant'}]}]",+,CBLC,44794671.0,44794671.0,A,rs2889414,snv,44794671.0,44794671.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,T,44794671,A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'effect': 'intron_variant', 'feature_id': 'NM_012116.3', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1362+390A>T', 'putative_impact': 'MODIFIER', 'rank': '9', 'total': '10', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_001130852.1', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1224+390A>T', 'putative_impact': 'MODIFIER', 'rank': '8', 'total': '9', 'transcript_biotype': 'protein_coding'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2003-02-20T13:15Z,rs2965116,111.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr19:g.44794812G>A,17.123714,19,True,CA308903359,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.855, 'alspac': 0.935, 'dbgap_popfreq': 0.922, 'estonian': 0.908, 'genome_dk': 0.9, 'gonl': 0.912, 'hapmap': 0.81, 'hgdp_stanford': 0.861, 'korea1k': 0.892, 'korean': 0.89, 'northernsweden': 0.945, 'prjeb36033': 0.837, 'qatari': 0.824, 'sgdp_prj': 0.398, 'siberian': 0.333, 'tommo': 0.907, 'topmed': 0.861, 'twinsuk': 0.93, 'vietnamese': 0.938}}, {'allele': 'A', 'freq': {'1000g': 0.145, 'alspac': 0.065, 'dbgap_popfreq': 0.078, 'estonian': 0.092, 'genome_dk': 0.1, 'gonl': 0.088, 'hapmap': 0.19, 'hgdp_stanford': 0.139, 'korea1k': 0.108, 'korean': 0.11, 'northernsweden': 0.055, 'prjeb36033': 0.163, 'qatari': 0.176, 'sgdp_prj': 0.602, 'siberian': 0.667, 'tommo': 0.093, 'topmed': 0.139, 'twinsuk': 0.07, 'vietnamese': 0.062}}, {'allele': 'C', 'freq': {'dbgap_popfreq': 0.0}}]",A,19,155.0,23624.0,False,Cbl proto-oncogene C,"[{'hgvs': 'NM_001130852.1:c.1224+531=', 'protein_product': {'refseq': 'NP_001124324.1'}, 'refseq': 'NM_001130852.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_012116.4:c.1362+531=', 'protein_product': {'refseq': 'NP_036248.3'}, 'refseq': 'NM_012116.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_005258753.1'}, 'refseq': 'XM_005258696.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'hgvs': 'XM_011526688.2:c.1362+531=', 'protein_product': {'refseq': 'XP_011524990.1'}, 'refseq': 'XM_011526688.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011526689.2:c.1224+531=', 'protein_product': {'refseq': 'XP_011524991.1'}, 'refseq': 'XM_011526689.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_011524992.1'}, 'refseq': 'XM_011526690.2', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_243917.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_935783.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,CBLC,44794812.0,44794812.0,G,rs10419669,snv,44794812.0,44794812.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,A,44794812,G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,21017.0,11875.0,6319.0,5556.0,102.0,54.0,48.0,1223.0,592.0,631.0,258.0,131.0,127.0,471.0,214.0,257.0,1298.0,300.0,998.0,25.0,12.0,13.0,4925.0,2793.0,2132.0,288.0,149.0,139.0,552.0,135.0,417.0,10699.0,10318.0,0.138699,0.28834,0.287201,0.289647,0.112088,0.114894,0.109091,0.0805453,0.0877037,0.0748162,0.0743516,0.0701285,0.0792759,0.0918845,0.0946903,0.089672,0.123407,0.116732,0.125566,0.0796178,0.0740741,0.0855263,0.0725075,0.0710796,0.0744673,0.137931,0.14438,0.131629,0.114713,0.115979,0.114309,0.137923,0.139512,A,A,151530.0,41184.0,22002.0,19182.0,910.0,470.0,440.0,15184.0,6750.0,8434.0,3470.0,1868.0,1602.0,5126.0,2260.0,2866.0,10518.0,2570.0,7948.0,314.0,162.0,152.0,67924.0,39294.0,28630.0,2088.0,1032.0,1056.0,4812.0,1164.0,3648.0,77572.0,73958.0,0.0,59.9885,-0.05,1.0,15.5196,0.386,0.682923,19.677,19,2155.0,1716.0,905.0,811.0,6.0,3.0,3.0,61.0,28.0,33.0,8.0,4.0,4.0,23.0,12.0,11.0,92.0,18.0,74.0,1.0,1.0,0.0,183.0,104.0,79.0,24.0,12.0,12.0,41.0,9.0,32.0,1096.0,1059.0,0.0779507,44794812.0,G,rs10419669,snp,20072119,"[{'effect': 'intron_variant', 'feature_id': 'NM_012116.3', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1362+531G>A', 'putative_impact': 'MODIFIER', 'rank': '9', 'total': '10', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_001130852.1', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1224+531G>A', 'putative_impact': 'MODIFIER', 'rank': '8', 'total': '9', 'transcript_biotype': 'protein_coding'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2008-05-27T02:29Z,rs61432948,130.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr19:g.44794812G>C,17.12325,19,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.855, 'alspac': 0.935, 'dbgap_popfreq': 0.922, 'estonian': 0.908, 'genome_dk': 0.9, 'gonl': 0.912, 'hapmap': 0.81, 'hgdp_stanford': 0.861, 'korea1k': 0.892, 'korean': 0.89, 'northernsweden': 0.945, 'prjeb36033': 0.837, 'qatari': 0.824, 'sgdp_prj': 0.398, 'siberian': 0.333, 'tommo': 0.907, 'topmed': 0.861, 'twinsuk': 0.93, 'vietnamese': 0.938}}, {'allele': 'A', 'freq': {'1000g': 0.145, 'alspac': 0.065, 'dbgap_popfreq': 0.078, 'estonian': 0.092, 'genome_dk': 0.1, 'gonl': 0.088, 'hapmap': 0.19, 'hgdp_stanford': 0.139, 'korea1k': 0.108, 'korean': 0.11, 'northernsweden': 0.055, 'prjeb36033': 0.163, 'qatari': 0.176, 'sgdp_prj': 0.602, 'siberian': 0.667, 'tommo': 0.093, 'topmed': 0.139, 'twinsuk': 0.07, 'vietnamese': 0.062}}, {'allele': 'C', 'freq': {'dbgap_popfreq': 0.0}}]",C,19,155.0,23624.0,False,Cbl proto-oncogene C,"[{'hgvs': 'NM_001130852.1:c.1224+531=', 'protein_product': {'refseq': 'NP_001124324.1'}, 'refseq': 'NM_001130852.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_012116.4:c.1362+531=', 'protein_product': {'refseq': 'NP_036248.3'}, 'refseq': 'NM_012116.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_005258753.1'}, 'refseq': 'XM_005258696.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'hgvs': 'XM_011526688.2:c.1362+531=', 'protein_product': {'refseq': 'XP_011524990.1'}, 'refseq': 'XM_011526688.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011526689.2:c.1224+531=', 'protein_product': {'refseq': 'XP_011524991.1'}, 'refseq': 'XM_011526689.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_011524992.1'}, 'refseq': 'XM_011526690.2', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_243917.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_935783.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,CBLC,44794812.0,44794812.0,G,rs10419669,snv,44794812.0,44794812.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,C,44794812,G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,1.0,1.0,1.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,1.0,0.0,6.59709e-06,2.42683e-05,4.54339e-05,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,1.28883e-05,0.0,C,C,151582.0,41206.0,22010.0,19196.0,910.0,470.0,440.0,15196.0,6758.0,8438.0,3470.0,1868.0,1602.0,5130.0,2260.0,2870.0,10528.0,2570.0,7958.0,314.0,162.0,152.0,67928.0,39296.0,28632.0,2088.0,1032.0,1056.0,4812.0,1164.0,3648.0,77590.0,73992.0,,60.0,0.094,1.0,18.4043,-0.848,0.728003,3.9828,19,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,-6.67572e-06,44794812.0,G,,snp,20072119,"[{'effect': 'intron_variant', 'feature_id': 'NM_012116.3', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1362+531G>C', 'putative_impact': 'MODIFIER', 'rank': '9', 'total': '10', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_001130852.1', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1224+531G>C', 'putative_impact': 'MODIFIER', 'rank': '8', 'total': '9', 'transcript_biotype': 'protein_coding'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2008-05-27T02:29Z,rs61432948,130.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr19:g.44797831T>C,17.123676,19,True,CA14715542,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.878, 'alspac': 0.94, 'dbgap_popfreq': 0.947, 'estonian': 0.871, 'genome_dk': 0.875, 'gnomad': 0.897, 'gonl': 0.935, 'korea1k': 0.974, 'korean': 0.978, 'northernsweden': 0.938, 'qatari': 0.917, 'sgdp_prj': 0.463, 'siberian': 0.417, 'tommo': 0.963, 'topmed': 0.896, 'twinsuk': 0.932, 'vietnamese': 0.928}}, {'allele': 'C', 'freq': {'1000g': 0.122, 'alspac': 0.06, 'dbgap_popfreq': 0.053, 'estonian': 0.129, 'genome_dk': 0.125, 'gnomad': 0.103, 'gonl': 0.065, 'korea1k': 0.026, 'korean': 0.022, 'northernsweden': 0.062, 'qatari': 0.083, 'sgdp_prj': 0.537, 'siberian': 0.583, 'tommo': 0.037, 'topmed': 0.104, 'twinsuk': 0.068, 'vietnamese': 0.072}}, {'allele': 'G', 'freq': {'dbgap_popfreq': 0.0}}]",C,19,155.0,23624.0,False,Cbl proto-oncogene C,"[{'hgvs': 'NM_001130852.1:c.1225-2550=', 'protein_product': {'refseq': 'NP_001124324.1'}, 'refseq': 'NM_001130852.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_012116.4:c.1363-2550=', 'protein_product': {'refseq': 'NP_036248.3'}, 'refseq': 'NM_012116.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_005258753.1'}, 'refseq': 'XM_005258696.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'hgvs': 'XM_011526688.2:c.1363-2348=', 'protein_product': {'refseq': 'XP_011524990.1'}, 'refseq': 'XM_011526688.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011526689.2:c.1225-2348=', 'protein_product': {'refseq': 'XP_011524991.1'}, 'refseq': 'XM_011526689.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_011524992.1'}, 'refseq': 'XM_011526690.2', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_243917.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_935783.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,CBLC,44797831.0,44797831.0,T,rs28534944,snv,44797831.0,44797831.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,C,44797831,T,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,15868.0,5878.0,3131.0,2747.0,28.0,16.0,12.0,2030.0,899.0,1131.0,236.0,125.0,111.0,174.0,76.0,98.0,890.0,214.0,676.0,31.0,17.0,14.0,5480.0,3124.0,2356.0,213.0,109.0,104.0,908.0,235.0,673.0,7946.0,7922.0,0.104578,0.142435,0.141918,0.143028,0.0307018,0.0340426,0.0271493,0.133482,0.132988,0.133878,0.06809,0.0670601,0.0692884,0.0337209,0.0334507,0.0339335,0.0842484,0.0833983,0.0845211,0.0987261,0.103659,0.0933333,0.0806523,0.0794709,0.0822741,0.102305,0.106445,0.0982987,0.188617,0.201544,0.184485,0.10232,0.106944,C,C,151734.0,41268.0,22062.0,19206.0,912.0,470.0,442.0,15208.0,6760.0,8448.0,3466.0,1864.0,1602.0,5160.0,2272.0,2888.0,10564.0,2566.0,7998.0,314.0,164.0,150.0,67946.0,39310.0,28636.0,2082.0,1024.0,1058.0,4814.0,1166.0,3648.0,77658.0,74076.0,0.0,59.9621,0.0,1.0,19.5042,-0.044,0.691114,6.4272,19,906.0,398.0,208.0,190.0,1.0,0.0,1.0,139.0,58.0,81.0,12.0,6.0,6.0,4.0,3.0,1.0,26.0,3.0,23.0,1.0,1.0,0.0,218.0,117.0,101.0,11.0,10.0,1.0,96.0,28.0,68.0,434.0,472.0,0.012581,44797831.0,T,rs28534944,snp,,"[{'effect': 'intron_variant', 'feature_id': 'NM_012116.3', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1363-2550T>C', 'putative_impact': 'MODIFIER', 'rank': '9', 'total': '10', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_001130852.1', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1225-2550T>C', 'putative_impact': 'MODIFIER', 'rank': '8', 'total': '9', 'transcript_biotype': 'protein_coding'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr19:g.44797831T>G,17.122793,19,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.878, 'alspac': 0.94, 'dbgap_popfreq': 0.947, 'estonian': 0.871, 'genome_dk': 0.875, 'gnomad': 0.897, 'gonl': 0.935, 'korea1k': 0.974, 'korean': 0.978, 'northernsweden': 0.938, 'qatari': 0.917, 'sgdp_prj': 0.463, 'siberian': 0.417, 'tommo': 0.963, 'topmed': 0.896, 'twinsuk': 0.932, 'vietnamese': 0.928}}, {'allele': 'C', 'freq': {'1000g': 0.122, 'alspac': 0.06, 'dbgap_popfreq': 0.053, 'estonian': 0.129, 'genome_dk': 0.125, 'gnomad': 0.103, 'gonl': 0.065, 'korea1k': 0.026, 'korean': 0.022, 'northernsweden': 0.062, 'qatari': 0.083, 'sgdp_prj': 0.537, 'siberian': 0.583, 'tommo': 0.037, 'topmed': 0.104, 'twinsuk': 0.068, 'vietnamese': 0.072}}, {'allele': 'G', 'freq': {'dbgap_popfreq': 0.0}}]",G,19,155.0,23624.0,False,Cbl proto-oncogene C,"[{'hgvs': 'NM_001130852.1:c.1225-2550=', 'protein_product': {'refseq': 'NP_001124324.1'}, 'refseq': 'NM_001130852.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_012116.4:c.1363-2550=', 'protein_product': {'refseq': 'NP_036248.3'}, 'refseq': 'NM_012116.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_005258753.1'}, 'refseq': 'XM_005258696.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'hgvs': 'XM_011526688.2:c.1363-2348=', 'protein_product': {'refseq': 'XP_011524990.1'}, 'refseq': 'XM_011526688.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011526689.2:c.1225-2348=', 'protein_product': {'refseq': 'XP_011524991.1'}, 'refseq': 'XM_011526689.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_011524992.1'}, 'refseq': 'XM_011526690.2', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_243917.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_935783.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,CBLC,44797831.0,44797831.0,T,rs28534944,snv,44797831.0,44797831.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,G,44797831,T,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'effect': 'intron_variant', 'feature_id': 'NM_012116.3', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1363-2550T>G', 'putative_impact': 'MODIFIER', 'rank': '9', 'total': '10', 'transcript_biotype': 'protein_coding'}, {'effect': 'intron_variant', 'feature_id': 'NM_001130852.1', 'feature_type': 'transcript', 'gene_id': 'CBLC', 'genename': 'CBLC', 'hgvs_c': 'c.1225-2550T>G', 'putative_impact': 'MODIFIER', 'rank': '8', 'total': '9', 'transcript_biotype': 'protein_coding'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr19:g.44798170_44798172dup,17.123701,19,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'CTG', 'freq': {'1000g': 0.877, 'alspac': 0.898, 'dbgap_popfreq': 0.878, 'estonian': 0.873, 'genome_dk': 0.8, 'gnomad': 0.868, 'gonl': 0.872, 'korea1k': 0.91, 'northernsweden': 0.92, 'tommo': 0.928, 'topmed': 0.869, 'twinsuk': 0.901, 'vietnamese': 0.944}}, {'allele': 'CTGCTG', 'freq': {'1000g': 0.123, 'alspac': 0.102, 'dbgap_popfreq': 0.122, 'estonian': 0.127, 'genome_dk': 0.2, 'gnomad': 0.132, 'gonl': 0.128, 'korea1k': 0.09, 'northernsweden': 0.08, 'tommo': 0.072, 'topmed': 0.131, 'twinsuk': 0.099, 'vietnamese': 0.056}}]",CTGCTG,19,155.0,23624.0,False,Cbl proto-oncogene C,"[{'hgvs': 'NM_001130852.1:c.1225-2211=', 'protein_product': {'refseq': 'NP_001124324.1'}, 'refseq': 'NM_001130852.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_012116.4:c.1363-2211=', 'protein_product': {'refseq': 'NP_036248.3'}, 'refseq': 'NM_012116.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_005258753.1'}, 'refseq': 'XM_005258696.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'hgvs': 'XM_011526688.2:c.1363-2009=', 'protein_product': {'refseq': 'XP_011524990.1'}, 'refseq': 'XM_011526688.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011526689.2:c.1225-2009=', 'protein_product': {'refseq': 'XP_011524991.1'}, 'refseq': 'XM_011526689.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_011524992.1'}, 'refseq': 'XM_011526690.2', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_243917.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_935783.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,CBLC,,,CTG,rs139576276,delins,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,2013-05-16T02:16Z,rs371599854,138.0,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, +chr19:g.44799247G>A,17.123459,19,True,CA308906264,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.996, 'alspac': 0.977, 'dbgap_popfreq': 0.979, 'estonian': 0.958, 'gnomad': 0.987, 'gonl': 0.98, 'northernsweden': 0.978, 'siberian': 0.5, 'topmed': 0.989, 'twinsuk': 0.975}}, {'allele': 'A', 'freq': {'1000g': 0.004, 'alspac': 0.023, 'dbgap_popfreq': 0.021, 'estonian': 0.042, 'gnomad': 0.013, 'gonl': 0.02, 'northernsweden': 0.022, 'siberian': 0.5, 'topmed': 0.011, 'twinsuk': 0.025}}]",A,19,155.0,23624.0,False,Cbl proto-oncogene C,"[{'hgvs': 'NM_001130852.1:c.1225-1134=', 'protein_product': {'refseq': 'NP_001124324.1'}, 'refseq': 'NM_001130852.1', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_012116.4:c.1363-1134=', 'protein_product': {'refseq': 'NP_036248.3'}, 'refseq': 'NM_012116.4', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_005258753.1'}, 'refseq': 'XM_005258696.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'hgvs': 'XM_011526688.2:c.1363-932=', 'protein_product': {'refseq': 'XP_011524990.1'}, 'refseq': 'XM_011526688.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'XM_011526689.2:c.1225-932=', 'protein_product': {'refseq': 'XP_011524991.1'}, 'refseq': 'XM_011526689.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'protein_product': {'refseq': 'XP_011524992.1'}, 'refseq': 'XM_011526690.2', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_243917.3', 'so': [{'accession': 'SO:0002152', 'name': 'genic_downstream_transcript_variant'}]}, {'refseq': 'XR_935783.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}]",+,CBLC,44799247.0,44799247.0,G,rs148933445,snv,44799247.0,44799247.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,A,44799247,G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2I1cl1I,1866.0,120.0,70.0,50.0,0.0,0.0,0.0,57.0,28.0,29.0,81.0,49.0,32.0,0.0,0.0,0.0,172.0,54.0,118.0,0.0,0.0,0.0,1415.0,852.0,563.0,15.0,8.0,7.0,6.0,1.0,5.0,1062.0,804.0,0.0122586,0.00289422,0.00315999,0.00258933,0.0,0.0,0.0,0.00373085,0.00412614,0.00341498,0.0233295,0.0262313,0.0199501,0.0,0.0,0.0,0.0161837,0.020979,0.0146511,0.0,0.0,0.0,0.0207972,0.0216485,0.019629,0.00716332,0.00773694,0.00660377,0.00124172,0.000857633,0.00136388,0.0136427,0.0108099,A,A,152220.0,41462.0,22152.0,19310.0,910.0,470.0,440.0,15278.0,6786.0,8492.0,3472.0,1868.0,1604.0,5190.0,2274.0,2916.0,10628.0,2574.0,8054.0,316.0,164.0,152.0,68038.0,39356.0,28682.0,2094.0,1034.0,1060.0,4832.0,1166.0,3666.0,77844.0,74376.0,9.64327e-16,59.9647,0.0,1.0,13.8456,0.334,0.676802,6.6153,19,19.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,2.0,1.0,1.0,0.0,0.0,0.0,1.0,1.0,0.0,0.0,0.0,0.0,16.0,13.0,3.0,0.0,0.0,0.0,0.0,0.0,0.0,15.0,4.0,0.00819498,44799247.0,G,rs148933445,snp,,"[{'effect': 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17319831]","[{'cdna': {'length': '2453', 'position': '1681'}, 'cds': {'length': '1887', 'position': '1615'}, 'effect': 'missense_variant', 'feature_id': 'NM_005581.4', 'feature_type': 'transcript', 'gene_id': 'BCAM', 'genename': 'BCAM', 'hgvs_c': 'c.1615A>G', 'hgvs_p': 'p.Thr539Ala', 'protein': {'length': '628', 'position': '539'}, 'putative_impact': 'MODERATE', 'rank': '12', 'total': '15', 'transcript_biotype': 'protein_coding'}, {'cdna': {'length': '3431', 'position': '1681'}, 'cds': {'length': '1767', 'position': '1615'}, 'effect': 'missense_variant', 'feature_id': 'NM_001013257.2', 'feature_type': 'transcript', 'gene_id': 'BCAM', 'genename': 'BCAM', 'hgvs_c': 'c.1615A>G', 'hgvs_p': 'p.Thr539Ala', 'protein': {'length': '588', 'position': '539'}, 'putative_impact': 'MODERATE', 'rank': '12', 'total': '14', 'transcript_biotype': 'protein_coding'}]",http://bit.ly/2SQdcI0,15478.0,G,19,19q13.32,4059,BCAM,45322744.0,45322744.0,44819487.0,44819487.0,"['LRG_798t2:c.1615A>G', 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'UniProtKB_(protein):P50895#VAR_021354']",,,,,,,,,,,,,"http://www.ncbi.nlm.nih.gov/sites/varvu?gene=4059&rs=1135062|http://www.ncbi.nlm.nih.gov/omim/111200,111200|http://omim.org/entry/612773#0002|http://omim.org/entry/111200#0002","[{'accession': 'NM_005581.4', 'symbol': 'BCAM'}, {'accession': 'NM_001013257.2', 'symbol': 'BCAM'}]",,,,,,,,2603.0,8615.0,6012.0,776.0,,2872.0,,2096.0,,,"[{'date': '2004-10-8T08:33Z', 'rsid': 'rs11548861', 'rv': 123}, {'date': '2004-09-24T19:27Z', 'rsid': 'rs11880954', 'rv': 123}, {'date': '2004-10-8T08:33Z', 'rsid': 'rs16979448', 'rv': 123}, {'date': '2008-05-24T10:02Z', 'rsid': 'rs58063257', 'rv': 130}]",1051.0,2871.0,1820.0,,"['+', '+']",,"[{'gene': 'NECTIN2', 'tissue': 'Liver'}]",,,,,,,,,,,,,,,,,,,,,,,, +chr19:g.44820881G>A,17.123442,19,True,CA9505000,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 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'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000019439', 'clinical_significance': 'Pathogenic', 'conditions': {'name': 'Apolipoproteinemia E1'}, 'last_evaluated': '1984-04-01', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.2(APOE):c.526C>T (p.Arg176Cys)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000019452', 'clinical_significance': 'Pathogenic', 'conditions': {'identifiers': {'medgen': 'C0020479', 'mondo': 'MONDO:0018473', 'omim': '617347'}, 'name': 'Familial type 3 hyperlipoproteinemia', 'synonyms': ['Hyperlipoproteinemia type 3', 'Hyperlipoproteinemia type III', 'Dysbetalipoproteinemia', 'Familial dysbetalipoproteinemia', 'Broad beta disease', 'Remnant removal disease', 'Broad-betalipoproteinemia', 'Apolipoprotein e, deficiency or defect of', 'Dysbetalipoproteinemia due to defect in apolipoprotein e-d', 'Familial hyperbeta- and prebetalipoproteinemia', 'Familial hypercholesterolemia with hyperlipemia', 'Floating-betalipoproteinemia', 'Hyperlipemia with familial hypercholesterolemic xanthomatosis']}, 'last_evaluated': '2017-02-21', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.2(APOE):c.526C>T (p.Arg176Cys)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000019454', 'clinical_significance': 'Pathogenic', 'conditions': {'identifiers': {'medgen': 'C0020479', 'mondo': 'MONDO:0018473', 'omim': '617347'}, 'name': 'Familial type 3 hyperlipoproteinemia', 'synonyms': ['Hyperlipoproteinemia type 3', 'Hyperlipoproteinemia type III', 'Dysbetalipoproteinemia', 'Familial dysbetalipoproteinemia', 'Broad beta disease', 'Remnant removal disease', 'Broad-betalipoproteinemia', 'Apolipoprotein e, deficiency or defect of', 'Dysbetalipoproteinemia due to defect in apolipoprotein e-d', 'Familial hyperbeta- and prebetalipoproteinemia', 'Familial hypercholesterolemia with hyperlipemia', 'Floating-betalipoproteinemia', 'Hyperlipemia with familial hypercholesterolemic xanthomatosis']}, 'last_evaluated': '1993-05-01', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.2(APOE):c.526C>T (p.Arg176Cys)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000211178', 'clinical_significance': 'drug response', 'conditions': {'identifiers': {'medgen': 'CN236484'}, 'name': 'atorvastatin response - Efficacy'}, 'last_evaluated': '2021-03-24', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.2(APOE):c.526C>T (p.Arg176Cys)', 'review_status': 'reviewed by expert panel'}, {'accession': 'RCV000346955', 'clinical_significance': 'other; risk factor', 'conditions': {'identifiers': {'medgen': 'CN517202'}, 'name': 'not provided', 'synonyms': ['none provided']}, 'last_evaluated': '2016-02-11', 'number_submitters': 4, 'origin': 'germline', 'preferred_name': 'NM_000041.2(APOE):c.526C>T (p.Arg176Cys)', 'review_status': 'criteria provided, multiple submitters, no conflicts'}, {'accession': 'RCV000825286', 'clinical_significance': 'Uncertain significance', 'conditions': {'identifiers': {'medgen': 'CN169374'}, 'name': 'not specified', 'synonyms': ['AllHighlyPenetrant']}, 'last_evaluated': '2019-01-18', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.2(APOE):c.526C>T (p.Arg176Cys)', 'review_status': 'criteria provided, single submitter'}, {'accession': 'RCV000845582', 'clinical_significance': 'drug response', 'conditions': {'identifiers': {'medgen': 'C0750384', 'mondo': 'MONDO:0007390', 'omim': '122700'}, 'name': 'Warfarin response', 'synonyms': ['COUMARIN SENSITIVITY', 'COUMARIN, POOR METABOLISM OF', 'WARFARIN RESISTANCE', 'Coumarin resistance', 'Cyp2a6, v1', 'Warfarin sensitivity', 'Coumadin response']}, 'last_evaluated': '2010-08-31', 'number_submitters': 1, 'origin': 'unknown', 'preferred_name': 'NM_000041.2(APOE):c.526C>T (p.Arg176Cys)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV001262472', 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'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}]",http://bit.ly/2SQdcI0,32903.0,C,19,19q13.32,348,APOE,45411941.0,45411941.0,44908684.0,44908684.0,"['NM_000041.4:c.388T>C', 'NM_001302688.2:c.466T>C', 'NM_001302689.2:c.388T>C', 'NM_001302690.2:c.388T>C', 'NM_001302691.2:c.388T>C']","['NC_000019.10:g.44908684T>C', 'NC_000019.9:g.45411941T>C', 'NG_007084.2:g.7903T>C']","['NP_000032.1:p.Cys130Arg', 'NP_001289617.1:p.Cys156Arg', 'NP_001289618.1:p.Cys130Arg', 'NP_001289619.1:p.Cys130Arg', 'NP_001289620.1:p.Cys130Arg', 'P02649:p.Cys130Arg']",,,,,,,,,,,,T,rs429358,single nucleotide variant,440870.0,C,"Conflicting_interpretations_of_pathogenicity,_other,_risk_factor",17864,NC_000019.10:g.44908684T>C,"['C0002395', 'C1863051', 'C0750384', 'C1847200', 'C2673196', 'C0750901', 'CN517202']",ORPHA329481,"criteria_provided,_conflicting_interpretations","['Alzheimer_disease', 'Alzheimer_disease_2', 'Warfarin_response', 'Alzheimer_disease,_type_4', 'Lipoprotein_glomerulopathy', 'Primary_degenerative_dementia_of_the_Alzheimer_type,_presenile_onset', 'not_provided']",,0.18033,0.486559,N,0.148941,0.7626,1.05397380339,,,,"pathogenic,other,association",Alzheimerdisease 2 (AD2) [MIM:104310],VAR_000652,P02649,Disease,"['ALZHEIMER DISEASE 2, DUE TO APOE4 ISOFORM', 'HYPERLIPOPROTEINEMIA, TYPE III, AUTOSOMAL DOMINANT']",MIM:107741,rs429358,107741.0025,"[{'accession': 'RCV000019438', 'clinical_significance': 'Pathogenic', 'conditions': {'identifiers': {'medgen': 'C0020479', 'mondo': 'MONDO:0018473', 'omim': '617347'}, 'name': 'Familial type 3 hyperlipoproteinemia', 'synonyms': ['Hyperlipoproteinemia type 3', 'Hyperlipoproteinemia type III', 'Dysbetalipoproteinemia', 'Familial dysbetalipoproteinemia', 'Broad beta disease', 'Remnant removal disease', 'Broad-betalipoproteinemia', 'Apolipoprotein e, deficiency or defect of', 'Dysbetalipoproteinemia due to defect in apolipoprotein e-d', 'Familial hyperbeta- and prebetalipoproteinemia', 'Familial hypercholesterolemia with hyperlipemia', 'Floating-betalipoproteinemia', 'Hyperlipemia with familial hypercholesterolemic xanthomatosis']}, 'last_evaluated': '2017-02-14', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000019448', 'clinical_significance': 'Conflicting interpretations of pathogenicity', 'conditions': {'identifiers': {'medgen': 'C1863051', 'mondo': 'MONDO:0007089', 'omim': '104310', 'orphanet': '1020'}, 'name': 'Alzheimer disease 2 (AD2)', 'synonyms': ['ALZHEIMER DISEASE 2, LATE-ONSET', 'ALZHEIMER DISEASE ASSOCIATED WITH APOE4', 'Alzheimer disease associated with APOE E4', 'Late-onset familial alzheimer disease']}, 'last_evaluated': '2020-11-03', 'number_submitters': 2, 'origin': 'germline', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000019455', 'clinical_significance': 'Pathogenic', 'conditions': {'identifiers': {'medgen': 'C0020479', 'mondo': 'MONDO:0018473', 'omim': '617347'}, 'name': 'Familial type 3 hyperlipoproteinemia', 'synonyms': ['Hyperlipoproteinemia type 3', 'Hyperlipoproteinemia type III', 'Dysbetalipoproteinemia', 'Familial dysbetalipoproteinemia', 'Broad beta disease', 'Remnant removal disease', 'Broad-betalipoproteinemia', 'Apolipoprotein e, deficiency or defect of', 'Dysbetalipoproteinemia due to defect in apolipoprotein e-d', 'Familial hyperbeta- and prebetalipoproteinemia', 'Familial hypercholesterolemia with hyperlipemia', 'Floating-betalipoproteinemia', 'Hyperlipemia with familial hypercholesterolemic xanthomatosis']}, 'last_evaluated': '1993-05-01', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000019456', 'clinical_significance': 'Pathogenic', 'conditions': {'name': 'APOE4(-)-FREIBURG'}, 'last_evaluated': '2017-02-15', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000019458', 'clinical_significance': 'association', 'conditions': {'identifiers': {'medgen': 'C4479660'}, 'name': 'APOE5 VARIANT'}, 'last_evaluated': '2019-11-22', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000292119', 'clinical_significance': 'Likely pathogenic; other; risk factor', 'conditions': {'identifiers': {'medgen': 'CN517202'}, 'name': 'not provided', 'synonyms': ['none provided']}, 'last_evaluated': '2022-03-29', 'number_submitters': 3, 'origin': 'germline', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'criteria provided, multiple submitters, no conflicts'}, {'accession': 'RCV000825286', 'clinical_significance': 'Uncertain significance', 'conditions': {'identifiers': {'medgen': 'CN169374'}, 'name': 'not specified', 'synonyms': ['AllHighlyPenetrant']}, 'last_evaluated': '2019-01-18', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'criteria provided, single submitter'}, {'accession': 'RCV000826089', 'clinical_significance': 'risk factor', 'conditions': {'identifiers': {'medgen': 'C0750901', 'mesh': 'D000544'}, 'name': 'Primary degenerative dementia of the Alzheimer type, presenile onset', 'synonyms': [""Early-onset Alzheimer's disease"", 'Alzheimer disease, early onset']}, 'last_evaluated': '2019-01-16', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'criteria provided, single submitter'}, {'accession': 'RCV000845581', 'clinical_significance': 'drug response', 'conditions': {'identifiers': {'medgen': 'C0750384', 'mondo': 'MONDO:0007390', 'omim': '122700'}, 'name': 'Warfarin response', 'synonyms': ['COUMARIN SENSITIVITY', 'COUMARIN, POOR METABOLISM OF', 'WARFARIN RESISTANCE', 'Coumarin resistance', 'Cyp2a6, v1', 'Warfarin sensitivity', 'Coumadin response']}, 'last_evaluated': '2010-08-31', 'number_submitters': 1, 'origin': 'unknown', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV000991302', 'clinical_significance': 'Likely pathogenic', 'conditions': {'identifiers': {'human_phenotype_ontology': 'HP:0007213', 'medgen': 'C0002395', 'mondo': 'MONDO:0004975', 'orphanet': '1020'}, 'name': 'Alzheimer disease', 'synonyms': ['Presenile and senile dementia', ""Alzheimer's disease""]}, 'last_evaluated': '2019-06-27', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'criteria provided, single submitter'}, {'accession': 'RCV001175124', 'clinical_significance': 'Likely pathogenic', 'conditions': {'identifiers': {'medgen': 'C0020445', 'mondo': 'MONDO:0005439', 'omim': 'PS143890'}, 'name': 'Familial hypercholesterolemia (FH)'}, 'last_evaluated': '2020-05-27', 'number_submitters': 1, 'origin': 'germline', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'no assertion criteria provided'}, {'accession': 'RCV001195807', 'clinical_significance': 'Pathogenic', 'conditions': {'identifiers': {'medgen': 'C1847200', 'mondo': 'MONDO:0011743', 'omim': '606889', 'orphanet': '1020'}, 'name': 'Alzheimer disease 4', 'synonyms': ['Alzheimer disease familial type 4']}, 'last_evaluated': '2020-03-24', 'number_submitters': 1, 'origin': 'unknown', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'criteria provided, single submitter'}, {'accession': 'RCV001262791', 'clinical_significance': 'Uncertain significance', 'conditions': {'identifiers': {'medgen': 'C2673196', 'mondo': 'MONDO:0012725', 'omim': '611771', 'orphanet': '329481'}, 'name': 'Lipoprotein glomerulopathy (LPG)'}, 'last_evaluated': '2019-01-01', 'number_submitters': 1, 'origin': 'unknown', 'preferred_name': 'NM_000041.4(APOE):c.388T>C (p.Cys130Arg)', 'review_status': 'criteria provided, single submitter'}]","['104300', '104310', '122700', '606889', '611771']","['Institute_of_Human_Genetics,_University_of_Leipzig_Medical_Center:CV_varv_865', 'Molecular_Diagnostic_Laboratory_for_Inherited_Cardiovascular_Disease,Montreal_Heart_Institute:9115002', 'OMIM_Allelic_Variant:107741.0008', 'OMIM_Allelic_Variant:107741.0016', 'OMIM_Allelic_Variant:107741.0022', 'OMIM_Allelic_Variant:107741.0023', 'OMIM_Allelic_Variant:107741.0025', 'UniProtKB_(protein):P02649#VAR_000652']",,,,,,,,,,3460.0,10721.0,7261.0,"http://www.ncbi.nlm.nih.gov/sites/varvu?gene=348&rs=429358|http://www.ncbi.nlm.nih.gov/omim/104310,107741,107741|http://omim.org/entry/107741#0016|http://omim.org/entry/107741#0015|http://omim.org/entry/107741#0008|http://www.ncbi.nlm.nih.gov/pubmed?term=21123754",,636.0,1412.0,1465.0,4628.0,829.0,3216.0,,,,,,,,,,,,"[{'date': '2000-09-19T13:56Z', 'rsid': 'rs630496', 'rv': 85}, {'date': '2008-05-26T20:59Z', 'rsid': 'rs61228756', 'rv': 130}]",,,,,"['+', '+', '+', '+']",ENSG00000130204,"[{'gene': 'APOC1', 'tissue': 'Adrenal_Gland'}, {'gene': 'APOC1', 'tissue': 'Esophagus_Mucosa'}, {'gene': 'AC011481.2', 'tissue': 'Esophagus_Muscularis'}, {'gene': 'AC243964.3', 'tissue': 'Thyroid'}]",,,,,,,http://www.ncbi.nlm.nih.gov/pubmed?term=21123754,,,,,,,,,,,,,,,,, +chr19:g.44909668del,17.123518,19,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'CCC', 'freq': {'1000g': 0.998, 'dbgap_popfreq': 0.995, 'estonian': 0.997, 'genome_dk': 0.975, 'gnomad': 0.995, 'gonl': 0.992, 'northernsweden': 0.975, 'topmed': 0.995}}, {'allele': 'CC', 'freq': {'1000g': 0.002, 'dbgap_popfreq': 0.005, 'estonian': 0.003, 'genome_dk': 0.025, 'gnomad': 0.005, 'gonl': 0.008, 'northernsweden': 0.025, 'topmed': 0.005}}]",CC,19,155.0,348.0,False,apolipoprotein E,"[{'protein_product': {'refseq': 'NP_000032.1'}, 'refseq': 'NM_000041.4', 'so': [{'accession': 'SO:0001987', 'name': 'downstream_transcript_variant'}]}, {'protein_product': {'refseq': 'NP_001289617.1'}, 'refseq': 'NM_001302688.2', 'so': [{'accession': 'SO:0001987', 'name': 'downstream_transcript_variant'}]}, {'protein_product': {'refseq': 'NP_001289618.1'}, 'refseq': 'NM_001302689.2', 'so': [{'accession': 'SO:0001987', 'name': 'downstream_transcript_variant'}]}, {'protein_product': {'refseq': 'NP_001289619.1'}, 'refseq': 'NM_001302690.2', 'so': [{'accession': 'SO:0001987', 'name': 'downstream_transcript_variant'}]}, {'protein_product': {'refseq': 'NP_001289620.1'}, 'refseq': 'NM_001302691.2', 'so': [{'accession': 'SO:0001987', 'name': 'downstream_transcript_variant'}]}]",+,APOE,,,CCC,rs537741299,delins,44909669.0,44909668.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,C,44909667,CC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'distance_to_feature': '4579', 'effect': 'upstream_gene_variant', 'feature_id': 'NM_001321065.1', 'feature_type': 'transcript', 'gene_id': 'APOC1', 'genename': 'APOC1', 'hgvs_c': 'c.-5224del', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '4579', 'effect': 'upstream_gene_variant', 'feature_id': 'NM_001321066.1', 'feature_type': 'transcript', 'gene_id': 'APOC1', 'genename': 'APOC1', 'hgvs_c': 'c.-5224del', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '4887', 'effect': 'upstream_gene_variant', 'feature_id': 'NM_001645.4', 'feature_type': 'transcript', 'gene_id': 'APOC1', 'genename': 'APOC1', 'hgvs_c': 'c.-5224del', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '273', 'effect': 'downstream_gene_variant', 'feature_id': 'NM_001302688.1', 'feature_type': 'transcript', 'gene_id': 'APOE', 'genename': 'APOE', 'hgvs_c': 'c.*418del', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '273', 'effect': 'downstream_gene_variant', 'feature_id': 'NM_000041.3', 'feature_type': 'transcript', 'gene_id': 'APOE', 'genename': 'APOE', 'hgvs_c': 'c.*418del', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '273', 'effect': 'downstream_gene_variant', 'feature_id': 'NM_001302691.1', 'feature_type': 'transcript', 'gene_id': 'APOE', 'genename': 'APOE', 'hgvs_c': 'c.*418del', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '273', 'effect': 'downstream_gene_variant', 'feature_id': 'NM_001302689.1', 'feature_type': 'transcript', 'gene_id': 'APOE', 'genename': 'APOE', 'hgvs_c': 'c.*418del', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '273', 'effect': 'downstream_gene_variant', 'feature_id': 'NM_001302690.1', 'feature_type': 'transcript', 'gene_id': 'APOE', 'genename': 'APOE', 'hgvs_c': 'c.*418del', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'effect': 'intergenic_region', 'feature_id': 'APOE-APOC1', 'feature_type': 'intergenic_region', 'gene_id': 'APOE-APOC1', 'genename': 'APOE-APOC1', 'hgvs_c': 'n.44909668del', 'putative_impact': 'MODIFIER'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'accession': 'SO:0001634', 'name': '500B_downstream_variant'}]",,,,,,,,,,,,,,,,,,,,, +chr19:g.44910319C>G,17.123617,19,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'C', 'freq': {'1000g': 0.844, 'alspac': 0.782, 'dbgap_popfreq': 0.822, 'estonian': 0.804, 'genome_dk': 0.625, 'gnomad': 0.825, 'gonl': 0.785, 'korea1k': 0.858, 'korean': 0.859, 'northernsweden': 0.807, 'page_study': 0.853, 'qatari': 0.917, 'sgdp_prj': 0.455, 'siberian': 0.417, 'tommo': 0.873, 'topmed': 0.835, 'twinsuk': 0.797, 'vietnamese': 0.796}}, {'allele': 'G', 'freq': {'korean': 0.0}}, {'allele': 'T', 'freq': {'1000g': 0.156, 'alspac': 0.218, 'dbgap_popfreq': 0.178, 'estonian': 0.196, 'genome_dk': 0.375, 'gnomad': 0.175, 'gonl': 0.215, 'korea1k': 0.142, 'korean': 0.141, 'northernsweden': 0.193, 'page_study': 0.147, 'qatari': 0.083, 'sgdp_prj': 0.545, 'siberian': 0.583, 'tommo': 0.127, 'topmed': 0.165, 'twinsuk': 0.203, 'vietnamese': 0.204}}]",G,19,155.0,,,,,,,44910319.0,44910319.0,C,rs75627662,snv,44910319.0,44910319.0,http://bit.ly/2suyRKt,,,,,,,,,,,,,,,,,,G,44910319,C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'distance_to_feature': '3928', 'effect': 'upstream_gene_variant', 'feature_id': 'NM_001321065.1', 'feature_type': 'transcript', 'gene_id': 'APOC1', 'genename': 'APOC1', 'hgvs_c': 'c.-4573C>G', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'distance_to_feature': '3928', 'effect': 'upstream_gene_variant', 'feature_id': 'NM_001321066.1', 'feature_type': 'transcript', 'gene_id': 'APOC1', 'genename': 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[{'accession': 'SO:0001986', 'name': 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'putative_impact': 'MODIFIER', 'transcript_biotype': 'pseudogene'}, {'distance_to_feature': '4009', 'effect': 'downstream_gene_variant', 'feature_id': 'NM_000483.4', 'feature_type': 'transcript', 'gene_id': 'APOC2', 'genename': 'APOC2', 'hgvs_c': 'c.*4326G>C', 'putative_impact': 'MODIFIER', 'transcript_biotype': 'protein_coding'}, {'effect': 'intergenic_region', 'feature_id': 'APOC2-CLPTM1', 'feature_type': 'intergenic_region', 'gene_id': 'APOC2-CLPTM1', 'genename': 'APOC2-CLPTM1', 'hgvs_c': 'n.44953575G>C', 'putative_impact': 'MODIFIER'}]",,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,"[{'accession': 'SO:0001636', 'name': '2KB_upstream_variant'}]",,,,,,,,,,,,,,,,,,,,, +chr19:g.44955206A>G,17.123796,19,True,CA308881637,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'A', 'freq': {'1000g': 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+chr19:g.44956594T>G,17.123945,19,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'T', 'freq': {'1000g': 0.429, 'dbgap_popfreq': 0.493, 'estonian': 0.485, 'genome_dk': 0.5, 'gnomad': 0.478, 'gonl': 0.565, 'hapmap': 0.475, 'korea1k': 0.465, 'korean': 0.462, 'northernsweden': 0.515, 'qatari': 0.481, 'sgdp_prj': 0.296, 'siberian': 0.28, 'tommo': 0.512, 'topmed': 0.465, 'vietnamese': 0.429}}, {'allele': 'C', 'freq': {'1000g': 0.571, 'dbgap_popfreq': 0.507, 'estonian': 0.515, 'genome_dk': 0.5, 'gnomad': 0.522, 'gonl': 0.435, 'hapmap': 0.525, 'korea1k': 0.535, 'korean': 0.538, 'northernsweden': 0.485, 'qatari': 0.519, 'sgdp_prj': 0.704, 'siberian': 0.72, 'tommo': 0.488, 'topmed': 0.535, 'vietnamese': 0.571}}, {'allele': 'G', 'freq': {'korean': 0.0}}]",G,19,155.0,1209.0,False,CLPTM1 regulator of GABA type A receptor forward trafficking,"[{'hgvs': 'NM_001282175.2:c.30+1509=', 'protein_product': {'refseq': 'NP_001269104.1'}, 'refseq': 'NM_001282175.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001282176.2:c.-235+1893=', 'protein_product': {'refseq': 'NP_001269105.1'}, 'refseq': 'NM_001282176.2', 'so': [{'accession': 'SO:0001627', 'name': 'intron_variant'}]}, {'hgvs': 'NM_001294.4:c.72+1127=', 'protein_product': {'refseq': 'NP_001285.1'}, 'refseq': 'NM_001294.4', 'so': [{'accession': 'SO:0001627', 'name': 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+chr19:g.45020325G>C,17.12307,19,True,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,http://bit.ly/2AqoLOc,"[{'allele': 'G', 'freq': {'1000g': 0.64, 'alspac': 0.764, 'dbgap_popfreq': 0.813, 'estonian': 0.719, 'genome_dk': 0.7, 'gnomad': 0.713, 'gonl': 0.776, 'hapmap': 0.644, 'korea1k': 0.585, 'korean': 0.589, 'northernsweden': 0.752, 'qatari': 0.713, 'sgdp_prj': 0.379, 'siberian': 0.417, 'tommo': 0.622, 'topmed': 0.708, 'twinsuk': 0.761}}, {'allele': 'A', 'freq': {'1000g': 0.36, 'alspac': 0.236, 'dbgap_popfreq': 0.187, 'estonian': 0.281, 'genome_dk': 0.3, 'gnomad': 0.287, 'gonl': 0.224, 'hapmap': 0.356, 'korea1k': 0.415, 'korean': 0.411, 'northernsweden': 0.248, 'qatari': 0.287, 'sgdp_prj': 0.621, 'siberian': 0.583, 'tommo': 0.378, 'topmed': 0.292, 'twinsuk': 0.239}}, {'allele': 'C', 'freq': {'dbgap_popfreq': 0.0}}]",C,19,155.0,5971.0,False,"RELB proto-oncogene, NF-kB 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'NM_001382422.1:c.1719+2297=', 'protein_product': {'refseq': 'NP_001369351.1'}, 'refseq': 'NM_001382422.1', 'so': [{'accession': 'SO:0001627', 'name': 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