lfqa1 / util /create_dpr_training_from_dataset.py
Achyut Tiwari
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import argparse
import random
import json
import re
from sentence_transformers import SentenceTransformer
from sentence_transformers.util import semantic_search, cos_sim
from tqdm.auto import tqdm
from datasets import load_dataset
from common import clean_answer, clean_question
def find_hard_negative_ctxs(dataset, dataset_embeddings, embedding_index: int,
exclude_answer_patterns, similarity_threshold=[0.5, 0.6], k=25, min_count=3):
hard_negative_ctxs = []
results = semantic_search(dataset_embeddings[embedding_index], dataset_embeddings, top_k=k,
score_function=cos_sim)
# list if dicts
# [{'corpus_id': 8, 'score': -0.019427383318543434},
# ...
# {'corpus_id': 10, 'score': -0.09040290117263794}]
# hard negative are most similar and negatives are most disimilar to embedding_index
hard_negative_results = results[0][1:k + 1]
assert len(hard_negative_results) > min_count * 2
for r in hard_negative_results:
example = dataset[r["corpus_id"]]
if similarity_threshold[0] < r["score"] <= similarity_threshold[1]:
for a in example["answers"]["text"]:
hard_negative_ctxs.append({"title": "", "text": clean_answer(a)})
if len(hard_negative_ctxs) > min_count:
break
return hard_negative_ctxs[:min_count]
def find_negative_ctxs(dataset, dataset_embeddings, embedding_index: int,
exclude_answer_patterns, similarity_threshold=0.1, k=7, min_count=3):
negative_ctxs = []
random_sample = random.sample(range(len(dataset_embeddings)), k * 20)
similarities = cos_sim(dataset_embeddings[embedding_index], dataset_embeddings[random_sample])[0].tolist()
for idx, score in enumerate(similarities):
if score < similarity_threshold:
example = dataset[random_sample[idx]]
for a in example["answers"]["text"]:
negative_ctxs.append({"title": "", "text": clean_answer(a)})
if len(negative_ctxs) > min_count:
break
return negative_ctxs[:min_count]
def generate_dpr_training_file(args):
embedder = SentenceTransformer(args.embedding_model)
eli5_train_set = load_dataset("vblagoje/lfqa", split="train")
eli5_validation_set = load_dataset("vblagoje/lfqa", split="validation")
eli5_test_set = load_dataset("vblagoje/lfqa", split="test")
train_set = embedder.encode([example["title"] for example in eli5_train_set], convert_to_tensor=True,
show_progress_bar=True)
validation_set = embedder.encode([example["title"] for example in eli5_validation_set], convert_to_tensor=True,
show_progress_bar=True)
test_set = embedder.encode([example["title"] for example in eli5_test_set], convert_to_tensor=True,
show_progress_bar=True)
exclude_answer_patterns = [re.compile("not sure what you"), re.compile("\n\n >")]
for dataset_name, dataset, dataset_embeddings in zip(["train", "validation", "test"],
[eli5_train_set, eli5_validation_set, eli5_test_set],
[train_set, validation_set, test_set]):
min_elements = 3
skip_count = 0
progress_bar = tqdm(range(len(dataset)), desc="Creating DPR formatted question/passage docs")
with open('eli5-dpr-' + dataset_name + '.jsonl', 'w') as fp:
for idx, example in enumerate(dataset):
negative_ctxs = find_negative_ctxs(dataset, dataset_embeddings, idx, exclude_answer_patterns)
hard_negative_ctxs = find_hard_negative_ctxs(dataset, dataset_embeddings, idx, exclude_answer_patterns)
positive_context = [{"text": clean_answer(a), "title": ""} for a in example["answers"]["text"] if
not any([p.search(a) for p in exclude_answer_patterns])]
if not positive_context:
positive_context = [{"text": clean_answer(a), "title": ""} for a in example["answers"]["text"]]
if len(positive_context) > 0 and len(negative_ctxs) > 0 and len(hard_negative_ctxs) >= min_elements:
json.dump({"id": example["q_id"],
"question": clean_question(example["title"]),
"positive_ctxs": positive_context[:min_elements],
"negative_ctxs": negative_ctxs[:min_elements],
"hard_negative_ctxs": hard_negative_ctxs[:min_elements]}, fp)
fp.write("\n")
else:
skip_count += 1
progress_bar.update(1)
print(f"Skipped {skip_count} questions")
if __name__ == "__main__":
parser = argparse.ArgumentParser(description="Creates DPR training file from LFQA dataset")
parser.add_argument(
"--embedding_model",
default="all-mpnet-base-v2",
help="Embedding model to use for question encoding and semantic search",
)
main_args, _ = parser.parse_known_args()
generate_dpr_training_file(main_args)