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skowshik commited on
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30d58e8
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1 Parent(s): 506f4d8

Update ckpt and data

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Files changed (42) hide show
  1. .gitignore +6 -0
  2. adrd/__pycache__/__init__.cpython-311.pyc +0 -0
  3. adrd/model/__pycache__/__init__.cpython-311.pyc +0 -0
  4. adrd/model/__pycache__/adrd_model.cpython-311.pyc +0 -0
  5. adrd/model/__pycache__/calibration.cpython-311.pyc +0 -0
  6. adrd/model/__pycache__/imaging_model.cpython-311.pyc +0 -0
  7. adrd/model/__pycache__/train_resnet.cpython-311.pyc +0 -0
  8. adrd/nn/__pycache__/__init__.cpython-311.pyc +0 -0
  9. adrd/nn/__pycache__/blocks.cpython-311.pyc +0 -0
  10. adrd/nn/__pycache__/c3d.cpython-311.pyc +0 -0
  11. adrd/nn/__pycache__/cnn_resnet3d.cpython-311.pyc +0 -0
  12. adrd/nn/__pycache__/cnn_resnet3d_with_linear_classifier.cpython-311.pyc +0 -0
  13. adrd/nn/__pycache__/dense_net.cpython-311.pyc +0 -0
  14. adrd/nn/__pycache__/focal_loss.cpython-311.pyc +0 -0
  15. adrd/nn/__pycache__/img_model_wrapper.cpython-311.pyc +0 -0
  16. adrd/nn/__pycache__/net_resnet3d.cpython-311.pyc +0 -0
  17. adrd/nn/__pycache__/resnet3d.cpython-311.pyc +0 -0
  18. adrd/nn/__pycache__/resnet_img_model.cpython-311.pyc +0 -0
  19. adrd/nn/__pycache__/selfattention.cpython-311.pyc +0 -0
  20. adrd/nn/__pycache__/transformer.cpython-311.pyc +0 -0
  21. adrd/nn/__pycache__/unet.cpython-311.pyc +0 -0
  22. adrd/nn/__pycache__/unet_3d.cpython-311.pyc +0 -0
  23. adrd/nn/__pycache__/unet_img_model.cpython-311.pyc +0 -0
  24. adrd/nn/__pycache__/vitautoenc.cpython-311.pyc +0 -0
  25. adrd/utils/__pycache__/__init__.cpython-311.pyc +0 -0
  26. adrd/utils/__pycache__/formatter.cpython-311.pyc +0 -0
  27. adrd/utils/__pycache__/imputer.cpython-311.pyc +0 -0
  28. adrd/utils/__pycache__/masker.cpython-311.pyc +0 -0
  29. adrd/utils/__pycache__/misc.cpython-311.pyc +0 -0
  30. adrd/utils/__pycache__/transformer_dataset.cpython-311.pyc +0 -0
  31. app.py +29 -6
  32. ckpt_densenet_emb_encoder_2_AUPR.pt +0 -3
  33. data/__pycache__/dataset_csv.cpython-311.pyc +0 -0
  34. data/dataset_csv.py +11 -5
  35. data/default_conf_new.toml +0 -1620
  36. data/gen_nacc_meta.py +0 -50
  37. data/input_meta_info.csv +0 -0
  38. data/nacc_allowable_code.csv +0 -0
  39. data/nacc_variable.csv +0 -810
  40. data/nacc_variable_mappings.pkl +0 -0
  41. data/{nacc_test_with_np_cli.csv → test.csv} +0 -0
  42. requirements.txt +1 -0
.gitignore ADDED
@@ -0,0 +1,6 @@
 
 
 
 
 
 
 
1
+ data_conv.ipynb
2
+ nacc_test_with_np_cli.csv
3
+ gen_nacc_meta.py
4
+ nacc_variable.csv
5
+ nacc_allowable_code.csv
6
+ ckpt_swinunetr_stripped_MNI.pt
adrd/__pycache__/__init__.cpython-311.pyc CHANGED
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adrd/utils/__pycache__/transformer_dataset.cpython-311.pyc CHANGED
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app.py CHANGED
@@ -2,6 +2,7 @@ import streamlit as st
2
  import json
3
  import random
4
  import pandas as pd
 
5
 
6
  # set page configuration to wide mode
7
  st.set_page_config(layout="wide")
@@ -21,10 +22,10 @@ st.markdown("""
21
  def load_model():
22
  import adrd
23
  try:
24
- ckpt_path = './ckpt_densenet_emb_encoder_2_AUPR.pt'
25
  model = adrd.model.ADRDModel.from_ckpt(ckpt_path, device='cpu')
26
  except:
27
- ckpt_path = '../adrd_tool_copied_from_sahana/dev/ckpt/ckpt_densenet_emb_encoder_2_AUPR.pt'
28
  model = adrd.model.ADRDModel.from_ckpt(ckpt_path, device='cpu')
29
  return model
30
 
@@ -32,8 +33,8 @@ def load_model():
32
  def load_nacc_data():
33
  from data.dataset_csv import CSVDataset
34
  dat = CSVDataset(
35
- dat_file = "./data/nacc_test_with_np_cli.csv",
36
- cnf_file = "./data/default_conf_new.toml"
37
  )
38
  return dat
39
 
@@ -47,8 +48,8 @@ def predict_proba(data_dict):
47
  # load NACC testing data
48
  from data.dataset_csv import CSVDataset
49
  dat_tst = CSVDataset(
50
- dat_file = "./data/nacc_test_with_np_cli.csv",
51
- cnf_file = "./data/default_conf_new.toml"
52
  )
53
 
54
  # initialize session state for the text input if it's not already set
@@ -83,7 +84,27 @@ with layout_l:
83
 
84
  with right_col:
85
  submit_button = st.form_submit_button("Predict")
 
 
 
 
 
 
 
 
 
 
86
 
 
 
 
 
 
 
 
 
 
 
87
  if sample_button:
88
  idx = random.randint(0, len(dat_tst) - 1)
89
  random_case = dat_tst[idx][0]
@@ -97,6 +118,8 @@ elif submit_button:
97
  try:
98
  # Parse the JSON input into a Python dictionary
99
  data_dict = json.loads(json_input)
 
 
100
  pred_dict = predict_proba(data_dict)
101
  with layout_r:
102
  st.write("Predicted probabilities:")
 
2
  import json
3
  import random
4
  import pandas as pd
5
+ import pickle
6
 
7
  # set page configuration to wide mode
8
  st.set_page_config(layout="wide")
 
22
  def load_model():
23
  import adrd
24
  try:
25
+ ckpt_path = './ckpt_swinunetr_stripped_MNI.pt'
26
  model = adrd.model.ADRDModel.from_ckpt(ckpt_path, device='cpu')
27
  except:
28
+ ckpt_path = '../adrd_tool_copied_from_sahana/dev/ckpt/ckpt_swinunetr_stripped_MNI.pt'
29
  model = adrd.model.ADRDModel.from_ckpt(ckpt_path, device='cpu')
30
  return model
31
 
 
33
  def load_nacc_data():
34
  from data.dataset_csv import CSVDataset
35
  dat = CSVDataset(
36
+ dat_file = "./data/test.csv",
37
+ cnf_file = "./data/input_meta_info.csv"
38
  )
39
  return dat
40
 
 
48
  # load NACC testing data
49
  from data.dataset_csv import CSVDataset
50
  dat_tst = CSVDataset(
51
+ dat_file = "./data/test.csv",
52
+ cnf_file = "./data/input_meta_info.csv"
53
  )
54
 
55
  # initialize session state for the text input if it's not already set
 
84
 
85
  with right_col:
86
  submit_button = st.form_submit_button("Predict")
87
+
88
+ with open('./data/nacc_variable_mappings.pkl', 'rb') as file:
89
+ nacc_mapping = pickle.load(file)
90
+
91
+ def convert_dictionary(original_dict, mappings):
92
+ transformed_dict = {}
93
+
94
+ for key, value in original_dict.items():
95
+ if key in mappings:
96
+ new_key, transform_map = mappings[key]
97
 
98
+ # If the value needs to be transformed
99
+ if value in transform_map:
100
+ transformed_value = transform_map[value]
101
+ else:
102
+ transformed_value = value # Keep the original value if no transformation is needed
103
+
104
+ transformed_dict[new_key] = transformed_value
105
+
106
+ return transformed_dict
107
+
108
  if sample_button:
109
  idx = random.randint(0, len(dat_tst) - 1)
110
  random_case = dat_tst[idx][0]
 
118
  try:
119
  # Parse the JSON input into a Python dictionary
120
  data_dict = json.loads(json_input)
121
+ data_dict = convert_dictionary(data_dict, nacc_mapping)
122
+ # print(data_dict)
123
  pred_dict = predict_proba(data_dict)
124
  with layout_r:
125
  st.write("Predicted probabilities:")
ckpt_densenet_emb_encoder_2_AUPR.pt DELETED
@@ -1,3 +0,0 @@
1
- version https://git-lfs.github.com/spec/v1
2
- oid sha256:9755a2ebbe1900199b897f8a71ee111e0aa587243c3428298d16423b2fd96a60
3
- size 26728907
 
 
 
 
data/__pycache__/dataset_csv.cpython-311.pyc CHANGED
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data/dataset_csv.py CHANGED
@@ -21,12 +21,15 @@ class CSVDataset:
21
  df = pd.read_csv(dat_file)
22
 
23
  # value mapping
24
- for col, mapping in value_mapping.items():
25
- df[col] = df[col].replace(mapping)
26
 
27
  # load toml file to get feature names
28
- with open(cnf_file, 'rb') as file:
29
- feature_names = tomllib.load(file)['feature'].keys()
 
 
 
30
 
31
  self.df = df
32
  self.df_features = df[feature_names]
@@ -50,7 +53,10 @@ class CSVDataset:
50
 
51
  if __name__ == '__main__':
52
  # load dataset
53
- dset = CSVDataset('./nacc_test_with_np_cli.csv', './default_conf_new.toml')
 
 
 
54
  print(dset[1])
55
 
56
  # %%
 
21
  df = pd.read_csv(dat_file)
22
 
23
  # value mapping
24
+ # for col, mapping in value_mapping.items():
25
+ # df[col] = df[col].replace(mapping)
26
 
27
  # load toml file to get feature names
28
+ # with open(cnf_file, 'rb') as file:
29
+ # feature_names = tomllib.load(file)['feature'].keys()
30
+
31
+ cnf = pd.read_csv(cnf_file)
32
+ feature_names = [col for col in list(cnf['Name']) if col not in label_names]
33
 
34
  self.df = df
35
  self.df_features = df[feature_names]
 
53
 
54
  if __name__ == '__main__':
55
  # load dataset
56
+ dset = CSVDataset(
57
+ dat_file = "./test.csv",
58
+ cnf_file = "./input_meta_info.csv"
59
+ )
60
  print(dset[1])
61
 
62
  # %%
data/default_conf_new.toml DELETED
@@ -1,1620 +0,0 @@
1
- [features]
2
-
3
- [feature.his_NACCREAS]
4
- type = "categorical"
5
- num_categories = 3
6
-
7
- [feature.his_NACCREFR]
8
- type = "categorical"
9
- num_categories = 3
10
-
11
- [feature.his_SEX]
12
- type = "categorical"
13
- num_categories = 2
14
-
15
- [feature.his_HISPANIC]
16
- type = "categorical"
17
- num_categories = 2
18
-
19
- [feature.his_HISPOR]
20
- type = "categorical"
21
- num_categories = 8
22
-
23
- [feature.his_RACE]
24
- type = "categorical"
25
- num_categories = 6
26
-
27
- [feature.his_RACESEC]
28
- type = "categorical"
29
- num_categories = 6
30
-
31
- [feature.his_RACETER]
32
- type = "categorical"
33
- num_categories = 6
34
-
35
- [feature.his_PRIMLANG]
36
- type = "categorical"
37
- num_categories = 7
38
-
39
- [feature.his_MARISTAT]
40
- type = "categorical"
41
- num_categories = 6
42
-
43
- [feature.his_LIVSIT]
44
- type = "categorical"
45
- num_categories = 5
46
-
47
- [feature.his_INDEPEND]
48
- type = "categorical"
49
- num_categories = 4
50
-
51
- [feature.his_RESIDENC]
52
- type = "categorical"
53
- num_categories = 4
54
-
55
- [feature.his_HANDED]
56
- type = "categorical"
57
- num_categories = 3
58
-
59
- [feature.his_NACCNIHR]
60
- type = "categorical"
61
- num_categories = 6
62
-
63
- [feature.his_NACCFAM]
64
- type = "categorical"
65
- num_categories = 2
66
-
67
- [feature.his_NACCMOM]
68
- type = "categorical"
69
- num_categories = 2
70
-
71
- [feature.his_NACCDAD]
72
- type = "categorical"
73
- num_categories = 2
74
-
75
- [feature.his_NACCFADM]
76
- type = "categorical"
77
- num_categories = 2
78
-
79
- [feature.his_NACCAM]
80
- type = "categorical"
81
- num_categories = 5
82
-
83
- [feature.his_NACCAMS]
84
- type = "categorical"
85
- num_categories = 4
86
-
87
- [feature.his_NACCFFTD]
88
- type = "categorical"
89
- num_categories = 2
90
-
91
- [feature.his_NACCFM]
92
- type = "categorical"
93
- num_categories = 6
94
-
95
- [feature.his_NACCFMS]
96
- type = "categorical"
97
- num_categories = 4
98
-
99
- [feature.his_NACCOM]
100
- type = "categorical"
101
- num_categories = 2
102
-
103
- [feature.his_NACCOMS]
104
- type = "categorical"
105
- num_categories = 4
106
-
107
- [feature.his_TOBAC30]
108
- type = "categorical"
109
- num_categories = 2
110
-
111
- [feature.his_TOBAC100]
112
- type = "categorical"
113
- num_categories = 2
114
-
115
- [feature.his_ALCOCCAS]
116
- type = "categorical"
117
- num_categories = 2
118
-
119
- [feature.his_ALCFREQ]
120
- type = "categorical"
121
- num_categories = 5
122
-
123
- [feature.his_CVHATT]
124
- type = "categorical"
125
- num_categories = 3
126
-
127
- [feature.his_HATTMULT]
128
- type = "categorical"
129
- num_categories = 2
130
-
131
- [feature.his_CVAFIB]
132
- type = "categorical"
133
- num_categories = 3
134
-
135
- [feature.his_CVANGIO]
136
- type = "categorical"
137
- num_categories = 3
138
-
139
- [feature.his_CVBYPASS]
140
- type = "categorical"
141
- num_categories = 3
142
-
143
- [feature.his_CVPACDEF]
144
- type = "categorical"
145
- num_categories = 3
146
-
147
- [feature.his_CVPACE]
148
- type = "categorical"
149
- num_categories = 3
150
-
151
- [feature.his_CVCHF]
152
- type = "categorical"
153
- num_categories = 3
154
-
155
- [feature.his_CVANGINA]
156
- type = "categorical"
157
- num_categories = 3
158
-
159
- [feature.his_CVHVALVE]
160
- type = "categorical"
161
- num_categories = 3
162
-
163
- [feature.his_CVOTHR]
164
- type = "categorical"
165
- num_categories = 3
166
-
167
- [feature.his_CBSTROKE]
168
- type = "categorical"
169
- num_categories = 3
170
-
171
- [feature.his_STROKMUL]
172
- type = "categorical"
173
- num_categories = 2
174
-
175
- [feature.his_CBTIA]
176
- type = "categorical"
177
- num_categories = 3
178
-
179
- [feature.his_TIAMULT]
180
- type = "categorical"
181
- num_categories = 2
182
-
183
- [feature.his_PD]
184
- type = "categorical"
185
- num_categories = 2
186
-
187
- [feature.his_PDOTHR]
188
- type = "categorical"
189
- num_categories = 2
190
-
191
- [feature.his_SEIZURES]
192
- type = "categorical"
193
- num_categories = 3
194
-
195
- [feature.his_TBI]
196
- type = "categorical"
197
- num_categories = 3
198
-
199
- [feature.his_TBIBRIEF]
200
- type = "categorical"
201
- num_categories = 3
202
-
203
- [feature.his_TRAUMBRF]
204
- type = "categorical"
205
- num_categories = 3
206
-
207
- [feature.his_TBIEXTEN]
208
- type = "categorical"
209
- num_categories = 3
210
-
211
- [feature.his_TRAUMEXT]
212
- type = "categorical"
213
- num_categories = 3
214
-
215
- [feature.his_TBIWOLOS]
216
- type = "categorical"
217
- num_categories = 3
218
-
219
- [feature.his_TRAUMCHR]
220
- type = "categorical"
221
- num_categories = 3
222
-
223
- [feature.his_NCOTHR]
224
- type = "categorical"
225
- num_categories = 3
226
-
227
- [feature.his_DIABETES]
228
- type = "categorical"
229
- num_categories = 3
230
-
231
- [feature.his_DIABTYPE]
232
- type = "categorical"
233
- num_categories = 3
234
-
235
- [feature.his_HYPERTEN]
236
- type = "categorical"
237
- num_categories = 3
238
-
239
- [feature.his_HYPERCHO]
240
- type = "categorical"
241
- num_categories = 3
242
-
243
- [feature.his_B12DEF]
244
- type = "categorical"
245
- num_categories = 3
246
-
247
- [feature.his_THYROID]
248
- type = "categorical"
249
- num_categories = 3
250
-
251
- [feature.his_ARTHRIT]
252
- type = "categorical"
253
- num_categories = 3
254
-
255
- [feature.his_ARTHTYPE]
256
- type = "categorical"
257
- num_categories = 3
258
-
259
- [feature.his_ARTHUPEX]
260
- type = "categorical"
261
- num_categories = 2
262
-
263
- [feature.his_ARTHLOEX]
264
- type = "categorical"
265
- num_categories = 2
266
-
267
- [feature.his_ARTHSPIN]
268
- type = "categorical"
269
- num_categories = 2
270
-
271
- [feature.his_ARTHUNK]
272
- type = "categorical"
273
- num_categories = 2
274
-
275
- [feature.his_INCONTU]
276
- type = "categorical"
277
- num_categories = 3
278
-
279
- [feature.his_INCONTF]
280
- type = "categorical"
281
- num_categories = 3
282
-
283
- [feature.his_APNEA]
284
- type = "categorical"
285
- num_categories = 3
286
-
287
- [feature.his_RBD]
288
- type = "categorical"
289
- num_categories = 3
290
-
291
- [feature.his_INSOMN]
292
- type = "categorical"
293
- num_categories = 3
294
-
295
- [feature.his_OTHSLEEP]
296
- type = "categorical"
297
- num_categories = 3
298
-
299
- [feature.his_ALCOHOL]
300
- type = "categorical"
301
- num_categories = 3
302
-
303
- [feature.his_ABUSOTHR]
304
- type = "categorical"
305
- num_categories = 3
306
-
307
- [feature.his_PTSD]
308
- type = "categorical"
309
- num_categories = 3
310
-
311
- [feature.his_BIPOLAR]
312
- type = "categorical"
313
- num_categories = 3
314
-
315
- [feature.his_SCHIZ]
316
- type = "categorical"
317
- num_categories = 3
318
-
319
- [feature.his_DEP2YRS]
320
- type = "categorical"
321
- num_categories = 2
322
-
323
- [feature.his_DEPOTHR]
324
- type = "categorical"
325
- num_categories = 2
326
-
327
- [feature.his_ANXIETY]
328
- type = "categorical"
329
- num_categories = 3
330
-
331
- [feature.his_OCD]
332
- type = "categorical"
333
- num_categories = 3
334
-
335
- [feature.his_NPSYDEV]
336
- type = "categorical"
337
- num_categories = 3
338
-
339
- [feature.his_PSYCDIS]
340
- type = "categorical"
341
- num_categories = 3
342
-
343
- [feature.his_NACCTBI]
344
- type = "categorical"
345
- num_categories = 2
346
-
347
- [feature.med_ANYMEDS]
348
- type = "categorical"
349
- num_categories = 2
350
-
351
- [feature.med_NACCAHTN]
352
- type = "categorical"
353
- num_categories = 2
354
-
355
- [feature.med_NACCHTNC]
356
- type = "categorical"
357
- num_categories = 2
358
-
359
- [feature.med_NACCACEI]
360
- type = "categorical"
361
- num_categories = 2
362
-
363
- [feature.med_NACCAAAS]
364
- type = "categorical"
365
- num_categories = 2
366
-
367
- [feature.med_NACCBETA]
368
- type = "categorical"
369
- num_categories = 2
370
-
371
- [feature.med_NACCCCBS]
372
- type = "categorical"
373
- num_categories = 2
374
-
375
- [feature.med_NACCDIUR]
376
- type = "categorical"
377
- num_categories = 2
378
-
379
- [feature.med_NACCVASD]
380
- type = "categorical"
381
- num_categories = 2
382
-
383
- [feature.med_NACCANGI]
384
- type = "categorical"
385
- num_categories = 2
386
-
387
- [feature.med_NACCLIPL]
388
- type = "categorical"
389
- num_categories = 2
390
-
391
- [feature.med_NACCNSD]
392
- type = "categorical"
393
- num_categories = 2
394
-
395
- [feature.med_NACCAC]
396
- type = "categorical"
397
- num_categories = 2
398
-
399
- [feature.med_NACCADEP]
400
- type = "categorical"
401
- num_categories = 2
402
-
403
- [feature.med_NACCAPSY]
404
- type = "categorical"
405
- num_categories = 2
406
-
407
- [feature.med_NACCAANX]
408
- type = "categorical"
409
- num_categories = 2
410
-
411
- [feature.med_NACCADMD]
412
- type = "categorical"
413
- num_categories = 2
414
-
415
- [feature.med_NACCPDMD]
416
- type = "categorical"
417
- num_categories = 2
418
-
419
- [feature.med_NACCEMD]
420
- type = "categorical"
421
- num_categories = 2
422
-
423
- [feature.med_NACCEPMD]
424
- type = "categorical"
425
- num_categories = 2
426
-
427
- [feature.med_NACCDBMD]
428
- type = "categorical"
429
- num_categories = 2
430
-
431
- [feature.ph_VISION]
432
- type = "categorical"
433
- num_categories = 2
434
-
435
- [feature.ph_VISCORR]
436
- type = "categorical"
437
- num_categories = 2
438
-
439
- [feature.ph_VISWCORR]
440
- type = "categorical"
441
- num_categories = 2
442
-
443
- [feature.ph_HEARING]
444
- type = "categorical"
445
- num_categories = 2
446
-
447
- [feature.ph_HEARAID]
448
- type = "categorical"
449
- num_categories = 2
450
-
451
- [feature.ph_HEARWAID]
452
- type = "categorical"
453
- num_categories = 2
454
-
455
- [feature.cvd_ABRUPT]
456
- type = "categorical"
457
- num_categories = 2
458
-
459
- [feature.cvd_STEPWISE]
460
- type = "categorical"
461
- num_categories = 2
462
-
463
- [feature.cvd_SOMATIC]
464
- type = "categorical"
465
- num_categories = 2
466
-
467
- [feature.cvd_EMOT]
468
- type = "categorical"
469
- num_categories = 2
470
-
471
- [feature.cvd_HXHYPER]
472
- type = "categorical"
473
- num_categories = 2
474
-
475
- [feature.cvd_HXSTROKE]
476
- type = "categorical"
477
- num_categories = 2
478
-
479
- [feature.cvd_FOCLSYM]
480
- type = "categorical"
481
- num_categories = 2
482
-
483
- [feature.cvd_FOCLSIGN]
484
- type = "categorical"
485
- num_categories = 2
486
-
487
- [feature.cvd_CVDCOG]
488
- type = "categorical"
489
- num_categories = 2
490
-
491
- [feature.cvd_STROKCOG]
492
- type = "categorical"
493
- num_categories = 2
494
-
495
- [feature.cvd_CVDIMAG]
496
- type = "categorical"
497
- num_categories = 2
498
-
499
- [feature.cvd_CVDIMAG1]
500
- type = "categorical"
501
- num_categories = 2
502
-
503
- [feature.cvd_CVDIMAG2]
504
- type = "categorical"
505
- num_categories = 2
506
-
507
- [feature.cvd_CVDIMAG3]
508
- type = "categorical"
509
- num_categories = 2
510
-
511
- [feature.cvd_CVDIMAG4]
512
- type = "categorical"
513
- num_categories = 2
514
-
515
- [feature.updrs_PDNORMAL]
516
- type = "categorical"
517
- num_categories = 2
518
-
519
- [feature.updrs_SPEECH]
520
- type = "categorical"
521
- num_categories = 6
522
-
523
- [feature.updrs_FACEXP]
524
- type = "categorical"
525
- num_categories = 6
526
-
527
- [feature.updrs_TRESTFAC]
528
- type = "categorical"
529
- num_categories = 6
530
-
531
- [feature.updrs_TRESTRHD]
532
- type = "categorical"
533
- num_categories = 6
534
-
535
- [feature.updrs_TRESTLHD]
536
- type = "categorical"
537
- num_categories = 6
538
-
539
- [feature.updrs_TRESTRFT]
540
- type = "categorical"
541
- num_categories = 6
542
-
543
- [feature.updrs_TRESTLFT]
544
- type = "categorical"
545
- num_categories = 6
546
-
547
- [feature.updrs_TRACTRHD]
548
- type = "categorical"
549
- num_categories = 6
550
-
551
- [feature.updrs_TRACTLHD]
552
- type = "categorical"
553
- num_categories = 6
554
-
555
- [feature.updrs_RIGDNECK]
556
- type = "categorical"
557
- num_categories = 6
558
-
559
- [feature.updrs_RIGDUPRT]
560
- type = "categorical"
561
- num_categories = 6
562
-
563
- [feature.updrs_RIGDUPLF]
564
- type = "categorical"
565
- num_categories = 6
566
-
567
- [feature.updrs_RIGDLORT]
568
- type = "categorical"
569
- num_categories = 6
570
-
571
- [feature.updrs_RIGDLOLF]
572
- type = "categorical"
573
- num_categories = 6
574
-
575
- [feature.updrs_TAPSRT]
576
- type = "categorical"
577
- num_categories = 6
578
-
579
- [feature.updrs_TAPSLF]
580
- type = "categorical"
581
- num_categories = 6
582
-
583
- [feature.updrs_HANDMOVR]
584
- type = "categorical"
585
- num_categories = 6
586
-
587
- [feature.updrs_HANDMOVL]
588
- type = "categorical"
589
- num_categories = 6
590
-
591
- [feature.updrs_HANDALTR]
592
- type = "categorical"
593
- num_categories = 6
594
-
595
- [feature.updrs_HANDALTL]
596
- type = "categorical"
597
- num_categories = 6
598
-
599
- [feature.updrs_LEGRT]
600
- type = "categorical"
601
- num_categories = 6
602
-
603
- [feature.updrs_LEGLF]
604
- type = "categorical"
605
- num_categories = 6
606
-
607
- [feature.updrs_ARISING]
608
- type = "categorical"
609
- num_categories = 6
610
-
611
- [feature.updrs_POSTURE]
612
- type = "categorical"
613
- num_categories = 6
614
-
615
- [feature.updrs_GAIT]
616
- type = "categorical"
617
- num_categories = 6
618
-
619
- [feature.updrs_POSSTAB]
620
- type = "categorical"
621
- num_categories = 6
622
-
623
- [feature.updrs_BRADYKIN]
624
- type = "categorical"
625
- num_categories = 6
626
-
627
- [feature.npiq_NPIQINF]
628
- type = "categorical"
629
- num_categories = 3
630
-
631
- [feature.npiq_DEL]
632
- type = "categorical"
633
- num_categories = 4
634
-
635
- [feature.npiq_HALL]
636
- type = "categorical"
637
- num_categories = 4
638
-
639
- [feature.npiq_AGIT]
640
- type = "categorical"
641
- num_categories = 4
642
-
643
- [feature.npiq_DEPD]
644
- type = "categorical"
645
- num_categories = 4
646
-
647
- [feature.npiq_ANX]
648
- type = "categorical"
649
- num_categories = 4
650
-
651
- [feature.npiq_ELAT]
652
- type = "categorical"
653
- num_categories = 4
654
-
655
- [feature.npiq_APA]
656
- type = "categorical"
657
- num_categories = 4
658
-
659
- [feature.npiq_DISN]
660
- type = "categorical"
661
- num_categories = 4
662
-
663
- [feature.npiq_IRR]
664
- type = "categorical"
665
- num_categories = 4
666
-
667
- [feature.npiq_MOT]
668
- type = "categorical"
669
- num_categories = 4
670
-
671
- [feature.npiq_NITE]
672
- type = "categorical"
673
- num_categories = 4
674
-
675
- [feature.npiq_APP]
676
- type = "categorical"
677
- num_categories = 4
678
-
679
- [feature.gds_NOGDS]
680
- type = "categorical"
681
- num_categories = 2
682
-
683
- [feature.gds_SATIS]
684
- type = "categorical"
685
- num_categories = 2
686
-
687
- [feature.gds_DROPACT]
688
- type = "categorical"
689
- num_categories = 2
690
-
691
- [feature.gds_EMPTY]
692
- type = "categorical"
693
- num_categories = 2
694
-
695
- [feature.gds_BORED]
696
- type = "categorical"
697
- num_categories = 2
698
-
699
- [feature.gds_SPIRITS]
700
- type = "categorical"
701
- num_categories = 2
702
-
703
- [feature.gds_AFRAID]
704
- type = "categorical"
705
- num_categories = 2
706
-
707
- [feature.gds_HAPPY]
708
- type = "categorical"
709
- num_categories = 2
710
-
711
- [feature.gds_HELPLESS]
712
- type = "categorical"
713
- num_categories = 2
714
-
715
- [feature.gds_STAYHOME]
716
- type = "categorical"
717
- num_categories = 2
718
-
719
- [feature.gds_MEMPROB]
720
- type = "categorical"
721
- num_categories = 2
722
-
723
- [feature.gds_WONDRFUL]
724
- type = "categorical"
725
- num_categories = 2
726
-
727
- [feature.gds_WRTHLESS]
728
- type = "categorical"
729
- num_categories = 2
730
-
731
- [feature.gds_ENERGY]
732
- type = "categorical"
733
- num_categories = 2
734
-
735
- [feature.gds_HOPELESS]
736
- type = "categorical"
737
- num_categories = 2
738
-
739
- [feature.gds_BETTER]
740
- type = "categorical"
741
- num_categories = 2
742
-
743
- [feature.faq_BILLS]
744
- type = "categorical"
745
- num_categories = 4
746
-
747
- [feature.faq_TAXES]
748
- type = "categorical"
749
- num_categories = 4
750
-
751
- [feature.faq_SHOPPING]
752
- type = "categorical"
753
- num_categories = 4
754
-
755
- [feature.faq_GAMES]
756
- type = "categorical"
757
- num_categories = 4
758
-
759
- [feature.faq_STOVE]
760
- type = "categorical"
761
- num_categories = 4
762
-
763
- [feature.faq_MEALPREP]
764
- type = "categorical"
765
- num_categories = 4
766
-
767
- [feature.faq_EVENTS]
768
- type = "categorical"
769
- num_categories = 4
770
-
771
- [feature.faq_PAYATTN]
772
- type = "categorical"
773
- num_categories = 4
774
-
775
- [feature.faq_REMDATES]
776
- type = "categorical"
777
- num_categories = 4
778
-
779
- [feature.faq_TRAVEL]
780
- type = "categorical"
781
- num_categories = 4
782
-
783
- [feature.exam_NACCNREX]
784
- type = "categorical"
785
- num_categories = 2
786
-
787
- [feature.exam_NORMEXAM]
788
- type = "categorical"
789
- num_categories = 3
790
-
791
- [feature.exam_FOCLDEF]
792
- type = "categorical"
793
- num_categories = 2
794
-
795
- [feature.exam_GAITDIS]
796
- type = "categorical"
797
- num_categories = 2
798
-
799
- [feature.exam_EYEMOVE]
800
- type = "categorical"
801
- num_categories = 2
802
-
803
- [feature.exam_PARKSIGN]
804
- type = "categorical"
805
- num_categories = 2
806
-
807
- [feature.exam_RESTTRL]
808
- type = "categorical"
809
- num_categories = 2
810
-
811
- [feature.exam_RESTTRR]
812
- type = "categorical"
813
- num_categories = 2
814
-
815
- [feature.exam_SLOWINGL]
816
- type = "categorical"
817
- num_categories = 2
818
-
819
- [feature.exam_SLOWINGR]
820
- type = "categorical"
821
- num_categories = 2
822
-
823
- [feature.exam_RIGIDL]
824
- type = "categorical"
825
- num_categories = 2
826
-
827
- [feature.exam_RIGIDR]
828
- type = "categorical"
829
- num_categories = 2
830
-
831
- [feature.exam_BRADY]
832
- type = "categorical"
833
- num_categories = 2
834
-
835
- [feature.exam_PARKGAIT]
836
- type = "categorical"
837
- num_categories = 2
838
-
839
- [feature.exam_POSTINST]
840
- type = "categorical"
841
- num_categories = 2
842
-
843
- [feature.exam_CVDSIGNS]
844
- type = "categorical"
845
- num_categories = 2
846
-
847
- [feature.exam_CORTDEF]
848
- type = "categorical"
849
- num_categories = 2
850
-
851
- [feature.exam_SIVDFIND]
852
- type = "categorical"
853
- num_categories = 2
854
-
855
- [feature.exam_CVDMOTL]
856
- type = "categorical"
857
- num_categories = 2
858
-
859
- [feature.exam_CVDMOTR]
860
- type = "categorical"
861
- num_categories = 2
862
-
863
- [feature.exam_CORTVISL]
864
- type = "categorical"
865
- num_categories = 2
866
-
867
- [feature.exam_CORTVISR]
868
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869
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870
-
871
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872
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873
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874
-
875
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876
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877
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878
-
879
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880
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881
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882
-
883
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884
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885
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886
-
887
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888
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889
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890
-
891
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892
- type = "categorical"
893
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894
-
895
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896
- type = "categorical"
897
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898
-
899
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900
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901
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902
-
903
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904
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905
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906
-
907
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908
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909
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910
-
911
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912
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913
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914
-
915
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916
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917
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918
-
919
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920
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921
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922
-
923
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924
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925
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926
-
927
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928
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929
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930
-
931
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932
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933
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934
-
935
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936
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937
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938
-
939
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940
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941
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942
-
943
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944
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945
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946
-
947
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948
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949
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950
-
951
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952
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953
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954
-
955
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956
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957
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958
-
959
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960
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961
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962
-
963
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964
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965
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966
-
967
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968
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969
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970
-
971
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972
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973
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974
-
975
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976
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977
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978
-
979
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980
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981
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982
-
983
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984
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985
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986
-
987
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988
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989
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990
-
991
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992
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993
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994
-
995
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996
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997
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998
-
999
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1000
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1001
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1002
-
1003
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1004
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1005
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1006
-
1007
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1008
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1009
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1010
-
1011
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1012
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1013
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1014
-
1015
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1016
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1017
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1018
-
1019
- [feature.bat_MOCALAN]
1020
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1021
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1022
-
1023
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1024
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1025
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1026
-
1027
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1028
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1029
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1030
-
1031
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1032
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1033
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1034
-
1035
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1036
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1037
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1038
-
1039
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1040
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1041
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1042
-
1043
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1044
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1045
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1046
-
1047
- [feature.bat_RESPINTR]
1048
- type = "categorical"
1049
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1050
-
1051
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1052
- type = "categorical"
1053
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1054
-
1055
- [feature.bat_RESPFATG]
1056
- type = "categorical"
1057
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1058
-
1059
- [feature.bat_RESPEMOT]
1060
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1061
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1062
-
1063
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1064
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1065
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1066
-
1067
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1068
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1069
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1070
-
1071
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1072
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1073
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1074
-
1075
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1076
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1077
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1078
-
1079
- [feature.his_PACKSPER]
1080
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1081
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1082
-
1083
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1084
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1085
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1086
-
1087
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1088
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1089
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1090
-
1091
- [feature.bat_LOGIDAY]
1092
- type = "categorical"
1093
- num_categories = 32
1094
-
1095
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1096
- type = "categorical"
1097
- num_categories = 2
1098
-
1099
- [feature.bat_MOCACUBE]
1100
- type = "categorical"
1101
- num_categories = 2
1102
-
1103
- [feature.bat_MOCACLOC]
1104
- type = "categorical"
1105
- num_categories = 2
1106
-
1107
- [feature.bat_MOCACLON]
1108
- type = "categorical"
1109
- num_categories = 2
1110
-
1111
- [feature.bat_MOCACLOH]
1112
- type = "categorical"
1113
- num_categories = 2
1114
-
1115
- [feature.bat_MOCALETT]
1116
- type = "categorical"
1117
- num_categories = 2
1118
-
1119
- [feature.bat_MOCAFLUE]
1120
- type = "categorical"
1121
- num_categories = 2
1122
-
1123
- [feature.bat_MOCAORDT]
1124
- type = "categorical"
1125
- num_categories = 2
1126
-
1127
- [feature.bat_MOCAORMO]
1128
- type = "categorical"
1129
- num_categories = 2
1130
-
1131
- [feature.bat_MOCAORYR]
1132
- type = "categorical"
1133
- num_categories = 2
1134
-
1135
- [feature.bat_MOCAORDY]
1136
- type = "categorical"
1137
- num_categories = 2
1138
-
1139
- [feature.bat_MOCAORPL]
1140
- type = "categorical"
1141
- num_categories = 2
1142
-
1143
- [feature.bat_MOCAORCT]
1144
- type = "categorical"
1145
- num_categories = 2
1146
-
1147
- [feature.his_BIRTHYR]
1148
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1149
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1150
-
1151
- [feature.his_EDUC]
1152
- type = "numerical"
1153
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1154
-
1155
- [feature.his_NACCAGE]
1156
- type = "numerical"
1157
- shape = [1]
1158
-
1159
- [feature.his_SMOKYRS]
1160
- type = "numerical"
1161
- shape = [1]
1162
-
1163
- [feature.his_QUITSMOK]
1164
- type = "numerical"
1165
- shape = [1]
1166
-
1167
- [feature.his_HATTYEAR]
1168
- type = "numerical"
1169
- shape = [1]
1170
-
1171
- [feature.his_NACCSTYR]
1172
- type = "numerical"
1173
- shape = [1]
1174
-
1175
- [feature.his_NACCTIYR]
1176
- type = "numerical"
1177
- shape = [1]
1178
-
1179
- [feature.his_PDYR]
1180
- type = "numerical"
1181
- shape = [1]
1182
-
1183
- [feature.his_PDOTHRYR]
1184
- type = "numerical"
1185
- shape = [1]
1186
-
1187
- [feature.his_TBIYEAR]
1188
- type = "numerical"
1189
- shape = [1]
1190
-
1191
- [feature.med_NACCAMD]
1192
- type = "numerical"
1193
- shape = [1]
1194
-
1195
- [feature.ph_HEIGHT]
1196
- type = "numerical"
1197
- shape = [1]
1198
-
1199
- [feature.ph_WEIGHT]
1200
- type = "numerical"
1201
- shape = [1]
1202
-
1203
- [feature.ph_NACCBMI]
1204
- type = "numerical"
1205
- shape = [1]
1206
-
1207
- [feature.ph_BPSYS]
1208
- type = "numerical"
1209
- shape = [1]
1210
-
1211
- [feature.ph_BPDIAS]
1212
- type = "numerical"
1213
- shape = [1]
1214
-
1215
- [feature.ph_HRATE]
1216
- type = "numerical"
1217
- shape = [1]
1218
-
1219
- [feature.cvd_HACHIN]
1220
- type = "numerical"
1221
- shape = [1]
1222
-
1223
- [feature.gds_NACCGDS]
1224
- type = "numerical"
1225
- shape = [1]
1226
-
1227
- [feature.bat_MMSEORDA]
1228
- type = "numerical"
1229
- shape = [1]
1230
-
1231
- [feature.bat_MMSEORLO]
1232
- type = "numerical"
1233
- shape = [1]
1234
-
1235
- [feature.bat_NACCMMSE]
1236
- type = "numerical"
1237
- shape = [1]
1238
-
1239
- [feature.bat_LOGIYR]
1240
- type = "numerical"
1241
- shape = [1]
1242
-
1243
- [feature.bat_LOGIPREV]
1244
- type = "numerical"
1245
- shape = [1]
1246
-
1247
- [feature.bat_LOGIMEM]
1248
- type = "numerical"
1249
- shape = [1]
1250
-
1251
- [feature.bat_MEMUNITS]
1252
- type = "numerical"
1253
- shape = [1]
1254
-
1255
- [feature.bat_MEMTIME]
1256
- type = "numerical"
1257
- shape = [1]
1258
-
1259
- [feature.bat_UDSBENTC]
1260
- type = "numerical"
1261
- shape = [1]
1262
-
1263
- [feature.bat_UDSBENTD]
1264
- type = "numerical"
1265
- shape = [1]
1266
-
1267
- [feature.bat_DIGIF]
1268
- type = "numerical"
1269
- shape = [1]
1270
-
1271
- [feature.bat_DIGIFLEN]
1272
- type = "numerical"
1273
- shape = [1]
1274
-
1275
- [feature.bat_DIGIB]
1276
- type = "numerical"
1277
- shape = [1]
1278
-
1279
- [feature.bat_DIGIBLEN]
1280
- type = "numerical"
1281
- shape = [1]
1282
-
1283
- [feature.bat_ANIMALS]
1284
- type = "numerical"
1285
- shape = [1]
1286
-
1287
- [feature.bat_VEG]
1288
- type = "numerical"
1289
- shape = [1]
1290
-
1291
- [feature.bat_TRAILA]
1292
- type = "numerical"
1293
- shape = [1]
1294
-
1295
- [feature.bat_TRAILARR]
1296
- type = "numerical"
1297
- shape = [1]
1298
-
1299
- [feature.bat_TRAILALI]
1300
- type = "numerical"
1301
- shape = [1]
1302
-
1303
- [feature.bat_TRAILB]
1304
- type = "numerical"
1305
- shape = [1]
1306
-
1307
- [feature.bat_TRAILBRR]
1308
- type = "numerical"
1309
- shape = [1]
1310
-
1311
- [feature.bat_TRAILBLI]
1312
- type = "numerical"
1313
- shape = [1]
1314
-
1315
- [feature.bat_WAIS]
1316
- type = "numerical"
1317
- shape = [1]
1318
-
1319
- [feature.bat_BOSTON]
1320
- type = "numerical"
1321
- shape = [1]
1322
-
1323
- [feature.bat_UDSVERFC]
1324
- type = "numerical"
1325
- shape = [1]
1326
-
1327
- [feature.bat_UDSVERFN]
1328
- type = "numerical"
1329
- shape = [1]
1330
-
1331
- [feature.bat_UDSVERNF]
1332
- type = "numerical"
1333
- shape = [1]
1334
-
1335
- [feature.bat_UDSVERLC]
1336
- type = "numerical"
1337
- shape = [1]
1338
-
1339
- [feature.bat_UDSVERLR]
1340
- type = "numerical"
1341
- shape = [1]
1342
-
1343
- [feature.bat_UDSVERLN]
1344
- type = "numerical"
1345
- shape = [1]
1346
-
1347
- [feature.bat_UDSVERTN]
1348
- type = "numerical"
1349
- shape = [1]
1350
-
1351
- [feature.bat_UDSVERTE]
1352
- type = "numerical"
1353
- shape = [1]
1354
-
1355
- [feature.bat_UDSVERTI]
1356
- type = "numerical"
1357
- shape = [1]
1358
-
1359
- [feature.bat_MOCATOTS]
1360
- type = "numerical"
1361
- shape = [1]
1362
-
1363
- [feature.bat_NACCMOCA]
1364
- type = "numerical"
1365
- shape = [1]
1366
-
1367
- [feature.bat_MOCANAMI]
1368
- type = "numerical"
1369
- shape = [1]
1370
-
1371
- [feature.bat_MOCAREGI]
1372
- type = "numerical"
1373
- shape = [1]
1374
-
1375
- [feature.bat_MOCADIGI]
1376
- type = "numerical"
1377
- shape = [1]
1378
-
1379
- [feature.bat_MOCASER7]
1380
- type = "numerical"
1381
- shape = [1]
1382
-
1383
- [feature.bat_MOCAREPE]
1384
- type = "numerical"
1385
- shape = [1]
1386
-
1387
- [feature.bat_MOCAABST]
1388
- type = "numerical"
1389
- shape = [1]
1390
-
1391
- [feature.bat_MOCARECN]
1392
- type = "numerical"
1393
- shape = [1]
1394
-
1395
- [feature.bat_MOCARECC]
1396
- type = "numerical"
1397
- shape = [1]
1398
-
1399
- [feature.bat_MOCARECR]
1400
- type = "numerical"
1401
- shape = [1]
1402
-
1403
- [feature.bat_CRAFTVRS]
1404
- type = "numerical"
1405
- shape = [1]
1406
-
1407
- [feature.bat_CRAFTURS]
1408
- type = "numerical"
1409
- shape = [1]
1410
-
1411
- [feature.bat_DIGFORCT]
1412
- type = "numerical"
1413
- shape = [1]
1414
-
1415
- [feature.bat_DIGFORSL]
1416
- type = "numerical"
1417
- shape = [1]
1418
-
1419
- [feature.bat_DIGBACCT]
1420
- type = "numerical"
1421
- shape = [1]
1422
-
1423
- [feature.bat_DIGBACLS]
1424
- type = "numerical"
1425
- shape = [1]
1426
-
1427
- [feature.bat_CRAFTDVR]
1428
- type = "numerical"
1429
- shape = [1]
1430
-
1431
- [feature.bat_CRAFTDRE]
1432
- type = "numerical"
1433
- shape = [1]
1434
-
1435
- [feature.bat_CRAFTDTI]
1436
- type = "numerical"
1437
- shape = [1]
1438
-
1439
- [feature.bat_MINTTOTS]
1440
- type = "numerical"
1441
- shape = [1]
1442
-
1443
- [feature.bat_MINTTOTW]
1444
- type = "numerical"
1445
- shape = [1]
1446
-
1447
- [feature.bat_MINTSCNG]
1448
- type = "numerical"
1449
- shape = [1]
1450
-
1451
- [feature.bat_MINTSCNC]
1452
- type = "numerical"
1453
- shape = [1]
1454
-
1455
- [feature.bat_MINTPCNG]
1456
- type = "numerical"
1457
- shape = [1]
1458
-
1459
- [feature.bat_MINTPCNC]
1460
- type = "numerical"
1461
- shape = [1]
1462
-
1463
- [feature.bat_MOCBTOTS]
1464
- type = "numerical"
1465
- shape = [1]
1466
-
1467
- [feature.bat_NACCMOCB]
1468
- type = "numerical"
1469
- shape = [1]
1470
-
1471
- [feature.bat_REY1REC]
1472
- type = "numerical"
1473
- shape = [1]
1474
-
1475
- [feature.bat_REY1INT]
1476
- type = "numerical"
1477
- shape = [1]
1478
-
1479
- [feature.bat_REY2REC]
1480
- type = "numerical"
1481
- shape = [1]
1482
-
1483
- [feature.bat_REY2INT]
1484
- type = "numerical"
1485
- shape = [1]
1486
-
1487
- [feature.bat_REY3REC]
1488
- type = "numerical"
1489
- shape = [1]
1490
-
1491
- [feature.bat_REY3INT]
1492
- type = "numerical"
1493
- shape = [1]
1494
-
1495
- [feature.bat_REY4REC]
1496
- type = "numerical"
1497
- shape = [1]
1498
-
1499
- [feature.bat_REY4INT]
1500
- type = "numerical"
1501
- shape = [1]
1502
-
1503
- [feature.bat_REY5REC]
1504
- type = "numerical"
1505
- shape = [1]
1506
-
1507
- [feature.bat_REY5INT]
1508
- type = "numerical"
1509
- shape = [1]
1510
-
1511
- [feature.bat_REY6REC]
1512
- type = "numerical"
1513
- shape = [1]
1514
-
1515
- [feature.bat_REY6INT]
1516
- type = "numerical"
1517
- shape = [1]
1518
-
1519
- [feature.bat_OTRAILA]
1520
- type = "numerical"
1521
- shape = [1]
1522
-
1523
- [feature.bat_OTRLARR]
1524
- type = "numerical"
1525
- shape = [1]
1526
-
1527
- [feature.bat_OTRLALI]
1528
- type = "numerical"
1529
- shape = [1]
1530
-
1531
- [feature.bat_OTRAILB]
1532
- type = "numerical"
1533
- shape = [1]
1534
-
1535
- [feature.bat_OTRLBRR]
1536
- type = "numerical"
1537
- shape = [1]
1538
-
1539
- [feature.bat_OTRLBLI]
1540
- type = "numerical"
1541
- shape = [1]
1542
-
1543
- [feature.bat_REYDREC]
1544
- type = "numerical"
1545
- shape = [1]
1546
-
1547
- [feature.bat_REYDINT]
1548
- type = "numerical"
1549
- shape = [1]
1550
-
1551
- [feature.bat_REYTCOR]
1552
- type = "numerical"
1553
- shape = [1]
1554
-
1555
- [feature.bat_REYFPOS]
1556
- type = "numerical"
1557
- shape = [1]
1558
-
1559
- [feature.bat_VNTTOTW]
1560
- type = "numerical"
1561
- shape = [1]
1562
-
1563
- [feature.bat_VNTPCNC]
1564
- type = "numerical"
1565
- shape = [1]
1566
-
1567
- [labels]
1568
-
1569
- [label.NC]
1570
- type = "categorical"
1571
- num_categories = 2
1572
-
1573
- [label.MCI]
1574
- type = "categorical"
1575
- num_categories = 2
1576
-
1577
- [label.DE]
1578
- type = "categorical"
1579
- num_categories = 2
1580
-
1581
- [label.AD]
1582
- type = "categorical"
1583
- num_categories = 2
1584
-
1585
- [label.LBD]
1586
- type = "categorical"
1587
- num_categories = 2
1588
-
1589
- [label.VD]
1590
- type = "categorical"
1591
- num_categories = 2
1592
-
1593
- [label.PRD]
1594
- type = "categorical"
1595
- num_categories = 2
1596
-
1597
- [label.FTD]
1598
- type = "categorical"
1599
- num_categories = 2
1600
-
1601
- [label.NPH]
1602
- type = "categorical"
1603
- num_categories = 2
1604
-
1605
- [label.SEF]
1606
- type = "categorical"
1607
- num_categories = 2
1608
-
1609
- [label.PSY]
1610
- type = "categorical"
1611
- num_categories = 2
1612
-
1613
- [label.TBI]
1614
- type = "categorical"
1615
- num_categories = 2
1616
-
1617
- [label.ODE]
1618
- type = "categorical"
1619
- num_categories = 2
1620
-
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
data/gen_nacc_meta.py DELETED
@@ -1,50 +0,0 @@
1
- # %%
2
- import pandas as pd
3
- import tomllib
4
-
5
- with open('./default_conf_new.toml', 'rb') as file:
6
- feature_names = tomllib.load(file)['feature'].keys()
7
-
8
- # %%
9
- df_var = pd.read_csv("./nacc_variable.csv")
10
- dict_1 = dict(zip(df_var['id'], df_var['descriptor']))
11
- dict_description = dict(zip(feature_names, [None] * len(feature_names)))
12
- for k in dict_description:
13
- try:
14
- if k == 'his_LIVSIT':
15
- dict_description[k] = dict_1['NACCLIVS']
16
- else:
17
- dict_description[k] = dict_1[k.split('_')[-1]]
18
- except:
19
- print(k)
20
-
21
- #%%
22
- df_tmp = pd.read_csv("./nacc_allowable_code.csv")
23
- df_tmp['variable_id'].fillna(method='ffill', inplace=True)
24
-
25
- dict_code = {}
26
- excluded_codes = set([])
27
- for k in dict_description.keys():
28
- if k == 'his_LIVSIT':
29
- nacc_name = 'NACCLIVS'
30
- else:
31
- nacc_name = k.split('_')[-1]
32
- sub_df = df_tmp[df_tmp['variable_id'] == nacc_name]
33
- dict_code[k] = {}
34
- for i, row in sub_df.iterrows():
35
- val = row['code_1']
36
- if val in excluded_codes:
37
- continue
38
- description = row['descriptor']
39
- dict_code[k][val] = description
40
-
41
- # df_code = pd.DataFrame.from_dict(dict_code, orient='index')
42
-
43
-
44
- # %%
45
- df_meta = pd.DataFrame()
46
- df_meta['Name'] = dict_description.keys()
47
- df_meta['Description'] = dict_description.values()
48
- df_meta['Values'] = dict_code.values()
49
- df_meta.to_csv('./input_meta_info.csv', index=False)
50
- # %%
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
data/input_meta_info.csv CHANGED
The diff for this file is too large to render. See raw diff
 
data/nacc_allowable_code.csv DELETED
The diff for this file is too large to render. See raw diff
 
data/nacc_variable.csv DELETED
@@ -1,810 +0,0 @@
1
- id,form_id,variable_type_id,source,descriptor
2
- NACCID,U1,D,v1-3,Subject ID number
3
- NACCADC,U1,D,v1-3,ADC at which subject was seen
4
- PACKET,U1,O,v1-3,Packet code
5
- FORMVER,U1,O,v1-3,Form version number
6
- VISITMO,U1,O,v1-3,Form date - month
7
- VISITDAY,U1,O,v1-3,Form date - day
8
- VISITYR,U1,O,v1-3,Form date - year
9
- NACCVNUM,U1,D,v1-3,UDS visit number (order)
10
- NACCAVST,U1,D,v1-3,Total number of all UDS visits made
11
- NACCNVST,U1,D,v1-3,Total number of in-person UDS visits made
12
- NACCDAYS,U1,D,v1-3,Days from initial visit to most recent visit
13
- NACCFDYS,U1,D,v1-3,Days from initial visit to each follow-up visit
14
- NACCDIED,U2,D,v1-3,Subject is known to be deceased
15
- NACCMOD,U2,D,v1-3,Month of death
16
- NACCYOD,U2,D,v1-3,Year of death
17
- NACCACTV,U2,D,v1-3,Follow-up status at the Alzheimer's Disease Center (ADC)
18
- NACCNOVS,U2,D,v1-3,No longer followed annually in person or by telephone
19
- NACCDSMO,U2,D,v1-3,Month of discontinuation from annual follow-up
20
- NACCDSDY,U2,D,v1-3,Day of discontinuation from annual follow-up
21
- NACCDSYR,U2,D,v1-3,Year of discontinuation from annual follow-up
22
- NACCNURP,U2,D,v1-3,Permanently moved to a nursing home
23
- NACCNRMO,U2,D,v1-3,Month permanently moved to nursing home
24
- NACCNRDY,U2,D,v1-3,Day permanently moved to nursing home
25
- NACCNRYR,U2,D,v1-3,Year permanently moved to nursing home
26
- NACCMDSS,U2,D,v1-3,Subject's status in the Minimal Data Set (MDS) and Uniform Data Set (UDS)
27
- NACCPAFF,U2,D,v1-3,Previously affiliated subject
28
- TELCOV,T1,O,v3,Why is the UDS telephone follow-up protocol being used to obtain data about the subject? COVID pandemic precludes traditional in-person UDS visit.
29
- TELMOD,T1,O,v3,What modality of communication was used to collect this remote UDS packet?
30
- NACCREAS,A1,D,v1-3,Primary reason for coming to ADC
31
- NACCREFR,A1,D,v1-3,Principal referral source
32
- BIRTHMO,A1,O,v1-3,Subject's month of birth
33
- BIRTHYR,A1,O,v1-3,Subject's year of birth
34
- SEX,A1,O,v1-3,Subject's sex
35
- HISPANIC,A1,O,v1-3,Hispanic/Latino ethnicity
36
- HISPOR,A1,O,v1-3,Hispanic origins
37
- HISPORX,A1,O,v1-3,"Hispanic origins, other - specify"
38
- RACE,A1,O,v1-3,Race
39
- RACEX,A1,O,v1-3,"Race, other - specify"
40
- RACESEC,A1,O,v1-3,Second race
41
- RACESECX,A1,O,v1-3,"Second race, other - specify"
42
- RACETER,A1,O,v1-3,Third race
43
- RACETERX,A1,O,v1-3,"Third race, other - specify"
44
- PRIMLANG,A1,O,v1-3,Primary language
45
- PRIMLANX,A1,O,v1-3,"Primary language, other- specify"
46
- EDUC,A1,O,v1-3,Years of education
47
- MARISTAT,A1,O,v1-3,Marital status
48
- NACCLIVS,A1,D,v1-3,Living situation
49
- INDEPEND,A1,O,v1-3,Level of independence
50
- RESIDENC,A1,O,v1-3,Type of residence
51
- HANDED,A1,O,v1-3,Is the subject left- or right-handed?
52
- NACCAGE,A1,D,v1-3,Subject's age at visit
53
- NACCAGEB,A1,D,v1-3,Subject's age at initial visit
54
- NACCNIHR,A1,D,v1-3,Derived NIH race definitions
55
- INBIRMO,A2,O,v1-3,Co-participant's month of birth
56
- INBIRYR,A2,O,v1-3,Co-participant's year of birth
57
- INSEX,A2,O,v1-3,Co-participant's sex
58
- NEWINF,A2,O,v1-3,"Is this a new co-participant - i.e., one who was not a co-participant at any past UDS visit?"
59
- INHISP,A2,O,v1-3,Co-participant Hispanic/Latino ethnicity
60
- INHISPOR,A2,O,v1-3,Co-participant's Hispanic origins
61
- INHISPOX,A2,O,v1-3,"Co-participant of Hispanic origins, other (specify)"
62
- INRACE,A2,O,v1-3,Co-participant race
63
- INRACEX,A2,O,v1-3,"Co-participant race, other (specify)"
64
- INRASEC,A2,O,v1-3,Co-participant second race
65
- INRASECX,A2,O,v1-3,"Co-participant second race, other (specify)"
66
- INRATER,A2,O,v1-3,Co-participant third race
67
- INRATERX,A2,O,v1-3,"Co-participant third race, other (specify)"
68
- INEDUC,A2,O,v1-3,Co-participant's years of education
69
- INRELTO,A2,O,v1-3,Co-participant's relationship to subject
70
- INRELTOX,A2,O,v1-2,"Co-participant relationship, other (specify)"
71
- INKNOWN,A2,O,v3,How long has the co-participant known the subject?
72
- INLIVWTH,A2,O,v1-3,Does the co-participant live with the subject?
73
- INVISITS,A2,O,v1-3,"If no, approximate frequency of in-person visits?"
74
- INCALLS,A2,O,v1-3,"If no, approximate frequency of telephone contact?"
75
- INRELY,A2,O,v1-3,Is there a question about the co-participant's reliability?
76
- NACCNINR,A2,D,v1-3,Derived NIH race definitions
77
- NACCFAM,A3,D,v1-3,Indicator of first-degree family member with cognitive impairment
78
- NACCMOM,A3,D,v1-3,Indicator of mother with cognitive impairment
79
- NACCDAD,A3,D,v1-3,Indicator of father with cognitive impairment
80
- NACCFADM,A3,D,v3,"In this family, is there evidence of a dominantly inherited AD mutation?"
81
- NACCAM,A3,D,v3,"In this family, is there evidence for an AD mutation (from list of specific mutations)?"
82
- NACCAMX,A3,D,v3,"If yes, Other (specify)"
83
- NACCAMS,A3,D,v3,Source of evidence for AD mutation
84
- NACCAMSX,A3,D,v3,"If other, specify"
85
- NACCFFTD,A3,D,v3,"In this family, is there evidence for an FTLD mutation?"
86
- NACCFM,A3,D,v3,"In this family, is there evidence for an FTLD mutation (from list of specific mutations)?"
87
- NACCFMX,A3,D,v3,"If yes, Other (specify)"
88
- NACCFMS,A3,D,v3,Source of evidence for FTLD mutation
89
- NACCFMSX,A3,D,v3,"If other, specify"
90
- NACCOM,A3,D,v3,"In this family, is there evidence for a mutation other than an AD or FTLD mutation?"
91
- NACCOMX,A3,D,v3,Specified other mutation
92
- NACCOMS,A3,D,v3,Source of evidence for other mutation
93
- NACCOMSX,A3,D,v3,"If other, specify"
94
- ANYMEDS,A4,O,v1-3,Subject taking any medications
95
- DRUG1-DRUG40,A4,O,v1-3,Name of medications used within two weeks of UDS visit
96
- NACCAMD,A4,D,v1-3,Total number of medications reported at each visit
97
- NACCAHTN,A4,D,v1-3,Reported current use of any type of antihypertensive or blood pressure medication
98
- NACCHTNC,A4,D,v1-3,Reported current use of an antihypertensive combination therapy
99
- NACCACEI,A4,D,v1-3,Reported current use of an angiotensin converting enzyme (ACE) inhibitor
100
- NACCAAAS,A4,D,v1-3,Reported current use of an antiadrenergic agent
101
- NACCBETA,A4,D,v1-3,Reported current use of a beta-adrenergic blocking agent (beta-blocker)
102
- NACCCCBS,A4,D,v1-3,Reported current use of a calcium channel blocking agent
103
- NACCDIUR,A4,D,v1-3,Reported current use of a diuretic
104
- NACCVASD,A4,D,v1-3,Reported current use of a vasodilator
105
- NACCANGI,A4,D,v1-3,Reported current use of an angiotensin II inhibitor
106
- NACCLIPL,A4,D,v1-3,Reported current use of lipid lowering medication
107
- NACCNSD,A4,D,v1-3,Reported current use of nonsteroidal anti-inflammatory medication
108
- NACCAC,A4,D,v1-3,Reported current use of an anticoagulant or antiplatelet agent
109
- NACCADEP,A4,D,v1-3,Reported current use of an antidepressant
110
- NACCAPSY,A4,D,v1-3,Reported current use of an antipsychotic agent
111
- NACCAANX,A4,D,v1-3,"Reported current use of an anxiolytic, sedative, or hypnotic agent"
112
- NACCADMD,A4,D,v1-3,Reported current use of a FDA-approved medication for Alzheimer's disease symptoms
113
- NACCPDMD,A4,D,v1-3,Reported current use of an antiparkinson agent
114
- NACCEMD,A4,D,v1-3,Reported current use of estrogen hormone therapy
115
- NACCEPMD,A4,D,v1-3,Reported current use of estrogen + progestin hormone therapy
116
- NACCDBMD,A4,D,v1-3,Reported current use of a diabetes medication
117
- TOBAC30,A5,O,v1-3,Smoked cigarettes in last 30 days
118
- TOBAC100,A5,O,v1-3,Smoked more than 100 cigarettes in life
119
- SMOKYRS,A5,O,v1-3,Total years smoked cigarettes
120
- PACKSPER,A5,O,v1-3,Average number of packs smoked per day
121
- QUITSMOK,A5,O,v1-3,"If the subject quit smoking, age at which he/she last smoked (i.e., quit)"
122
- ALCOCCAS,A5,O,v3,"In the past three months, has the subject consumed any alcohol?"
123
- ALCFREQ,A5,O,v3,"During the past three months, how often did the subject have at least one drink of any alcoholic beverage such as wine, beer, malt liquor, or spirits?"
124
- CVHATT,A5,O,v1-3,Heart attack/cardiac arrest
125
- HATTMULT,A5,O,v3,More than one heart attack/cardiac arrest?
126
- HATTYEAR,A5,O,v3,Year of most recent heart attack
127
- CVAFIB,A5,O,v1-3,Atrial fibrillation
128
- CVANGIO,A5,O,v1-3,Angioplasty/endarterectomy/stent
129
- CVBYPASS,A5,O,v1-3,Cardiac bypass procedure
130
- CVPACDEF,A5,O,v3,Pacemaker and/or defibrillator
131
- CVPACE,A5,O,v1-2,Pacemaker
132
- CVCHF,A5,O,v1-3,Congestive heart failure
133
- CVANGINA,A5,O,v3,Angina
134
- CVHVALVE,A5,O,v3,Heart valve replacement or repair
135
- CVOTHR,A5,O,v1-3,Other cardiovascular disease
136
- CVOTHRX,A5,O,v3,Specification for other cardiovascular disease
137
- CBSTROKE,A5,O,v1-3,Stroke
138
- STROKMUL,A5,O,v3,More than one stroke reported as of the Initial Visit
139
- NACCSTYR,A5,D,v1-3,Most recently reported year of stroke as of the Initial Visit
140
- CBTIA,A5,O,v1-3,Transient ischemic attack (TIA)
141
- TIAMULT,A5,O,v3,More than one TIA reported as of the Initial Visit
142
- NACCTIYR,A5,D,v1-3,Most recently reported year of TIA as of the Initial Visit
143
- PD,A5,O,v1-3,Parkinson's disease (PD)
144
- PDYR,A5,O,v1-3,Year of PD diagnosis
145
- PDOTHR,A5,O,v1-3,Other parkinsonian disorder
146
- PDOTHRYR,A5,O,v1-3,Year of parkinsonian disorder diagnosis
147
- SEIZURES,A5,O,v1-3,Seizures
148
- TBI,A5,O,v3,Traumatic brain injury (TbI)
149
- TBIBRIEF,A5,O,v3,Traumatic brain injury (TbI) with brief loss of consciousness
150
- TRAUMBRF,A5,O,v1-2,brain trauma - brief unconsciousness
151
- TBIEXTEN,A5,O,v3,TbI with extended loss of consciousness - 5 minutes of longer
152
- TRAUMEXT,A5,O,v1-2,brain trauma - extended unconsciousness
153
- TBIWOLOS,A5,O,v3,TbI without loss of consciousness - as might result from military detonations or sports injury
154
- TRAUMCHR,A5,O,v1-2,brain trauma - chronic deficit
155
- TBIYEAR,A5,O,v3,Year of most recent TbI
156
- NCOTHR,A5,O,v1-2,Other neurological condition
157
- NCOTHRX,A5,O,v1-2,Other neurological condition (specify)
158
- DIABETES,A5,O,v1-3,Diabetes
159
- DIABTYPE,A5,O,v3,"If Recent/active or Remote/inactive diabetes, which type?"
160
- HYPERTEN,A5,O,v1-3,Hypertension
161
- HYPERCHO,A5,O,v1-3,Hypercholesterolemia
162
- B12DEF,A5,O,v1-3,Vitamin b12 deficiency
163
- THYROID,A5,O,v1-3,Thyroid disease
164
- ARTHRIT,A5,O,v3,Arthritis
165
- ARTHTYPE,A5,O,v3,Type of arthritis
166
- ARTHTYPX,A5,O,v3,Other arthritis (specify)
167
- ARTHUPEX,A5,O,v3,"Arthritis, region affected - upper extremity"
168
- ARTHLOEX,A5,O,v3,"Arthritis, region affected - lower extremity"
169
- ARTHSPIN,A5,O,v3,"Arthritis, region affected - spine"
170
- ARTHUNK,A5,O,v3,Region affected - unknown
171
- INCONTU,A5,O,v1-3,Incontinence - urinary
172
- INCONTF,A5,O,v1-3,Incontinence - bowel
173
- APNEA,A5,O,v3,Sleep apnea history reported at Initial Visit
174
- RBD,A5,O,v3,REM sleep behavior disorder (RbD) history reported at Initial Visit
175
- INSOMN,A5,O,v3,Hyposomnia/insomnia history reported at Initial Visit
176
- OTHSLEEP,A5,O,v3,Other sleep disorder history reported at Initial Visit
177
- OTHSLEEX,A5,O,v3,Other sleep disorder (specify)
178
- ALCOHOL,A5,O,v1-3,"Alcohol abuse - clinically significant occurring over a 12-month period manifested in one of the following areas: work, driving, legal, or social"
179
- ABUSOTHR,A5,O,v1-3,"Other abused substances - clinically significant impairment occurring over a 12-month period manifested in one of the following areas: work, driving, legal, or social"
180
- ABUSX,A5,O,v1-3,"If reported other abused substances, specify abused substance(s)"
181
- PTSD,A5,O,v3,Post-traumatic stress disorder (PTSD)
182
- BIPOLAR,A5,O,v3,bipolar disorder
183
- SCHIZ,A5,O,v3,Schizophrenia
184
- DEP2YRS,A5,O,v1-3,Active depression in the last two years
185
- DEPOTHR,A5,O,v1-3,Depression episodes more than two years ago
186
- ANXIETY,A5,O,v3,Anxiety
187
- OCD,A5,O,v3,Obsessive-compulsive disorder (OCD)
188
- NPSYDEV,A5,O,v3,"Developmental neuropsychiatric disorders (e.g., autism spectrum disorder [ASD], attention-deficit hyperactivity disorder [ADHD], dyslexia)"
189
- PSYCDIS,A5,O,v1-3,Other psychiatric disorder
190
- PSYCDISX,A5,O,v1-3,"If recent/active or remote/inactive psychiatric disorder, specify disorder"
191
- NACCTBI,A5,D,v1-3,History of traumatic brain injury (TbI)
192
- HEIGHT,B1,O,v1-3,Subject's height (inches)
193
- WEIGHT,B1,O,v1-3,Subject's weight (lbs)
194
- NACCBMI,B1,D,v1-3,body mass index (bMI)
195
- BPSYS,B1,O,v1-3,"Subject blood pressure (sitting), systolic"
196
- BPDIAS,B1,O,v1-3,"Subject blood pressure (sitting), diastolic"
197
- HRATE,B1,O,v1-3,Subject resting heart rate (pulse)
198
- VISION,B1,O,v1-3,"Without corrective lenses, is the subject's vision functionally normal?"
199
- VISCORR,B1,O,v1-3,Does the subject usually wear corrective lenses?
200
- VISWCORR,B1,O,v1-3,"If the subject usually wears corrective lenses, is the subject's vision functionally normal with corrective lenses?"
201
- HEARING,B1,O,v1-3,"Without a hearing aid(s), is the subject's hearing functionally normal?"
202
- HEARAID,B1,O,v1-3,Does the subject usually wear a hearing aid(s)?
203
- HEARWAID,B1,O,v1-3,"If the subject usually wears a hearing aid(s), is the subject's hearing functionally normal with a hearing aid(s)?"
204
- BPSYSL,B1a,O,v3,"Participant systolic blood pressure, left arm"
205
- BPDIASL,B1a,O,v3,"Participant diastolic blood pressure, left arm"
206
- BPSYSR,B1a,O,v3,"Participant systolic blood pressure, right arm"
207
- BPDIASR,B1a,O,v3,"Participant diastolic blood pressure, right arm"
208
- BPDEVICE,B1a,O,v3,Taken using an approved device or cuff?
209
- ABRUPT,B2,O,v1-2,Abrupt onset (re: cognitive status)
210
- STEPWISE,B2,O,v1-2,Stepwise deterioration (re: cognitive status)
211
- SOMATIC,B2,O,v1-2,Somatic complaints
212
- EMOT,B2,O,v1-2,Emotional incontinence
213
- HXHYPER,B2,O,v1-2,History or presence of hypertension
214
- HXSTROKE,B2,O,v1-2,History of stroke
215
- FOCLSYM,B2,O,v1-2,Focal neurological symptoms
216
- FOCLSIGN,B2,O,v1-2,Focal neurological signs
217
- HACHIN,B2,O,v1-2,Hachinski ischemic score
218
- CVDCOG,B2,O,v2,Cerebrovascular disease contributing to cognitive impairment
219
- STROKCOG,B2,O,v2,Relationship between stroke and cognitive impairment
220
- CVDIMAG,B2,O,v2,Imaging evidence
221
- CVDIMAG1,B2,O,v2,Single strategic infarct
222
- CVDIMAG2,B2,O,v2,Multiple infarcts
223
- CVDIMAG3,B2,O,v2,Extensive white matter hyperintensity
224
- CVDIMAG4,B2,O,v2,Other imaging evidence
225
- CVDIMAGX,B2,O,v2,Other imaging evidence - specify
226
- PDNORMAL,B3,O,v1-2,UPDRS normal
227
- SPEECH,B3,O,v1-2,Speech
228
- SPEECHX,B3,O,v2,Speech; untestable - specify reason
229
- FACEXP,B3,O,v1-2,Facial expression
230
- FACEXPX,B3,O,v2,Facial expression; untestable - specify reason
231
- TRESTFAC,B3,O,v1-2,"Tremor at rest - face, lips, chin"
232
- TRESTFAX,B3,O,v2,"Tremor at rest - face, lips, chin; untestable - specify reason"
233
- TRESTRHD,B3,O,v1-2,Tremor at rest - right hand
234
- TRESTRHX,B3,O,v2,Tremor at rest - right hand; untestable - specify reason
235
- TRESTLHD,B3,O,v1-2,Tremor at rest - left hand
236
- TRESTLHX,B3,O,v2,Tremor at rest - left hand; untestable - specify reason
237
- TRESTRFT,B3,O,v1-2,Tremor at rest - right foot
238
- TRESTRFX,B3,O,v2,Tremor at rest - right foot; untestable - specify reason
239
- TRESTLFT,B3,O,v1-2,Tremor at rest - left foot
240
- TRESTLFX,B3,O,v2,Tremor at rest - left foot; untestable - specify reason
241
- TRACTRHD,B3,O,v1-2,Action or postural tremor - right hand
242
- TRACTRHX,B3,O,v2,Action or postural tremor - right hand; untestable - specify reason
243
- TRACTLHD,B3,O,v1-2,Action or postural tremor - left hand
244
- TRACTLHX,B3,O,v2,Action or postural tremor - left hand; untestable - specify reason
245
- RIGDNECK,B3,O,v1-2,Rigidity - neck
246
- RIGDNEX,B3,O,v2,Rigidity - neck; untestable - specify reason
247
- RIGDUPRT,B3,O,v1-2,Rigidity - right upper extremity
248
- RIGDUPRX,B3,O,v2,Rigidity - right upper extremity; untestable - specify reason
249
- RIGDUPLF,B3,O,v1-2,Rigidity - left upper extremity
250
- RIGDUPLX,B3,O,v2,Rigidity - left upper extremity; untestable - specify reason
251
- RIGDLORT,B3,O,v1-2,Rigidity - right lower extremity
252
- RIGDLORX,B3,O,v2,Rigidity - right lower extremity; untestable - specify reason
253
- RIGDLOLF,B3,O,v1-2,Rigidity - left lower extremity
254
- RIGDLOLX,B3,O,v2,Rigidity - left lower extremity; untestable - specify reason
255
- TAPSRT,B3,O,v1-2,Finger taps - right hand
256
- TAPSRTX,B3,O,v1-2,Finger taps - right hand; untestable - specify reason
257
- TAPSLF,B3,O,v1-2,Finger taps - left hand
258
- TAPSLFX,B3,O,v1-2,Finger taps - left hand; untestable - specify reason
259
- HANDMOVR,B3,O,v1-2,Hand movements - right hand
260
- HANDMVRX,B3,O,v1-2,Hand movements - right hand; untestable - specify reason
261
- HANDMOVL,B3,O,v1-2,Hand movements - left hand
262
- HANDMVLX,B3,O,v1-2,Hand movements - left hand; untestable - specify reason
263
- HANDALTR,B3,O,v1-2,Alternating movement - right hand
264
- HANDATRX,B3,O,v1-2,Alternating movement - right hand; untestable - specify reason
265
- HANDALTL,B3,O,v1-2,Alternating movement - left hand
266
- HANDATLX,B3,O,v1-2,Alternating movement - left hand; untestable - specify reason
267
- LEGRT,B3,O,v1-2,Leg agility - right leg
268
- LEGRTX,B3,O,v1-2,Leg agility - right leg; untestable - specify reason
269
- LEGLF,B3,O,v1-2,Leg agility - left leg
270
- LEGLFX,B3,O,v1-2,Leg agility - left leg; untestable - specify reason
271
- ARISING,B3,O,v1-2,Arising from chair
272
- ARISINGX,B3,O,v1-2,Arising from chair; untestable - specify reason
273
- POSTURE,B3,O,v1-2,Posture
274
- POSTUREX,B3,O,v1-2,Posture; untestable - specify reason
275
- GAIT,B3,O,v1-2,Gait
276
- GAITX,B3,O,v1-2,Gait; untestable - specify reason
277
- POSSTAB,B3,O,v1-2,Posture stability
278
- POSSTABX,B3,O,v1-2,Posture stability; untestable - specify reason
279
- BRADYKIN,B3,O,v1-2,body bradykinesia and hypokinesia
280
- BRADYKIX,B3,O,v2,body bradykinesia and hypokinesia; untestable - specify reason
281
- MEMORY,B4,O,v1-3,Memory
282
- ORIENT,B4,O,v1-3,Orientation
283
- JUDGMENT,B4,O,v1-3,Judgment and problem-solving
284
- COMMUN,B4,O,v1-3,Community affairs
285
- HOMEHOBB,B4,O,v1-3,Home and hobbies
286
- PERSCARE,B4,O,v1-3,Personal care
287
- CDRSUM,B4,O,v1-3,CDR® sum of boxes
288
- CDRGLOB,B4,O,v1-3,Global CDR®
289
- COMPORT,B4,O,v2-3,"behavior, comportment, and personality"
290
- CDRLANG,B4,O,v2-3,Language
291
- NPIQINF,B5,O,v1-3,NPI-Q co-participant
292
- NPIQINFX,B5,O,v1-3,"NPI-Q co-participant, other - specify"
293
- DEL,B5,O,v1-3,Delusions in the last month
294
- DELSEV,B5,O,v1-3,Delusions severity
295
- HALL,B5,O,v1-3,Hallucinations in the last month
296
- HALLSEV,B5,O,v1-3,Hallucinations severity
297
- AGIT,B5,O,v1-3,Agitation or aggression in the last month
298
- AGITSEV,B5,O,v1-3,Agitation or aggression severity
299
- DEPD,B5,O,v1-3,Depression or dysphoria in the last month
300
- DEPDSEV,B5,O,v1-3,Depression or dysphoria severity
301
- ANX,B5,O,v1-3,Anxiety in the last month
302
- ANXSEV,B5,O,v1-3,Anxiety severity
303
- ELAT,B5,O,v1-3,Elation or euphoria in the last month
304
- ELATSEV,B5,O,v1-3,Elation or euphoria severity
305
- APA,B5,O,v1-3,Apathy or indifference in the last month
306
- APASEV,B5,O,v1-3,Apathy or indifference severity
307
- DISN,B5,O,v1-3,Disinhibition in the last month
308
- DISNSEV,B5,O,v1-3,Disinhibition severity
309
- IRR,B5,O,v1-3,Irritability or lability in the last month
310
- IRRSEV,B5,O,v1-3,Irritability or lability severity
311
- MOT,B5,O,v1-3,Motor disturbance in the last month
312
- MOTSEV,B5,O,v1-3,Motor disturbance severity
313
- NITE,B5,O,v1-3,Nighttime behaviors in the last month
314
- NITESEV,B5,O,v1-3,Nighttime behaviors severity
315
- APP,B5,O,v1-3,Appetite and eating problems in the last month
316
- APPSEV,B5,O,v1-3,Appetite and eating severity
317
- NOGDS,B6,O,v1-3,"Is the subject able to complete the GDS, based on the clinician's best judgment?"
318
- SATIS,B6,O,v1-3,Are you basically satisfied with your life?
319
- DROPACT,B6,O,v1-3,Have you dropped many of your activities and interests?
320
- EMPTY,B6,O,v1-3,Do you feel that your life is empty?
321
- BORED,B6,O,v1-3,Do you often get bored?
322
- SPIRITS,B6,O,v1-3,Are you in good spirits most of the time?
323
- AFRAID,B6,O,v1-3,Are you afraid that something bad is going to happen to you?
324
- HAPPY,B6,O,v1-3,Do you feel happy most of the time?
325
- HELPLESS,B6,O,v1-3,Do you often feel helpless?
326
- STAYHOME,B6,O,v1-3,"Do you prefer to stay at home, rather than going out and doing new things?"
327
- MEMPROB,B6,O,v1-3,Do you feel you have more problems with memory than most?
328
- WONDRFUL,B6,O,v1-3,Do you think it is wonderful to be alive now?
329
- WRTHLESS,B6,O,v1-3,Do you feel pretty worthless the way you are now?
330
- ENERGY,B6,O,v1-3,Do you feel full of energy?
331
- HOPELESS,B6,O,v1-3,Do you feel that your situation is hopeless?
332
- BETTER,B6,O,v1-3,Do you think that most people are better off than you are?
333
- NACCGDS,B6,D,v1-3,Total GDS Score
334
- BILLS,B7,O,v1-3,"In the past four weeks, did the subject have any difficulty or need help with: Writing checks, paying bills, or balancing a checkbook"
335
- TAXES,B7,O,v1-3,"In the past four weeks, did the subject have any difficulty or need help with: Assembling tax records, business affairs, or other paper"
336
- SHOPPING,B7,O,v1-3,"In the past four weeks, did the subject have any difficulty or need help with: Shopping alone for clothes, household necessities, or groceries"
337
- GAMES,B7,O,v1-3,"In the past four weeks, did the subject have any difficulty or need help with: Playing a game of skill such as bridge or chess, working on a hobby"
338
- STOVE,B7,O,v1-3,"In the past four weeks, did the subject have any difficulty or need help with: Heating water, making a cup of coffee, turning off the stove"
339
- MEALPREP,B7,O,v1-3,"In the past four weeks, did the subject have any difficulty or need help with: Preparing a balanced meal"
340
- EVENTS,B7,O,v1-3,"In the past four weeks, did the subject have any difficulty or need help with: Keeping track of current events"
341
- PAYATTN,B7,O,v1-3,"In the past four weeks, did the subject have any difficulty or need help with: Paying attention to and understanding a TV program, book, or magazine"
342
- REMDATES,B7,O,v1-3,"In the past four weeks, did the subject have any difficulty or need help with: Remembering appointments, family occasions, idays, medications"
343
- TRAVEL,B7,O,v1-3,"In the past four weeks, did the subject have any difficulty or need help with: Traveling out of the neighborhood, driving, or arranging to take public transportation"
344
- NACCNREX,B8,D,v1-3,Were all findings unremarkable?
345
- NORMEXAM,B8,O,v3,Were there abnormal neurological exam findings?
346
- FOCLDEF,B8,O,v1-2,Are focal deficits present indicative of central nervous system disorder?
347
- GAITDIS,B8,O,v1-2,Is gait disorder present indicative of central nervous system disorder?
348
- EYEMOVE,B8,O,v1-2,Are there eye movement abnormalities present indicative of central nervous system disorder?
349
- PARKSIGN,B8,O,v3,Parkinsonian signs
350
- RESTTRL,B8,O,v3,Resting tremor - left arm
351
- RESTTRR,B8,O,v3,Resting tremor - right arm
352
- SLOWINGL,B8,O,v3,Slowing of fine motor movements - left side
353
- SLOWINGR,B8,O,v3,Slowing of fine motor movements - right side
354
- RIGIDL,B8,O,v3,Rigidity - left arm
355
- RIGIDR,B8,O,v3,Rigidity - right arm
356
- BRADY,B8,O,v3,bradykinesia
357
- PARKGAIT,B8,O,v3,Parkinsonian gait disorder
358
- POSTINST,B8,O,v3,Postural instability
359
- CVDSIGNS,B8,O,v3,Neurological sign considered by examiner to be most likely consistent with cerebrovascular disease
360
- CORTDEF,B8,O,v3,"Cortical cognitive deficit (e.g., aphasia, apraxia, neglect)"
361
- SIVDFIND,B8,O,v3,Focal or other neurological findings consistent with SIVD (subcortical ischemic vascular dementia)
362
- CVDMOTL,B8,O,v3,"Motor (may include weakness of combination of face, arm, and leg; reflex changes, etc.) - left side"
363
- CVDMOTR,B8,O,v3,"Motor (may include weakness of combination of face, arm, and leg; reflex changes, etc.) - right side"
364
- CORTVISL,B8,O,v3,Cortical visual field loss - left side
365
- CORTVISR,B8,O,v3,Cortical visual field loss - right side
366
- SOMATL,B8,O,v3,Somatosensory loss - left side
367
- SOMATR,B8,O,v3,Somatosensory loss - right side
368
- POSTCORT,B8,O,v3,"Higher cortical visual problem suggesting posterior cortical atrophy (e.g., prosopagnosia, simultagnosia, balint's syndrome) or apraxia of gaze"
369
- PSPCBS,B8,O,v3,"Findings suggestive of progressive supranuclear palsy (PSP), corticobasal syndrome (CbS), or other related disorders"
370
- EYEPSP,B8,O,v3,Eye movement changes consistent with PSP
371
- DYSPSP,B8,O,v3,Dysarthria consistent with PSP
372
- AXIALPSP,B8,O,v3,Axial rigidity consistent with PSP
373
- GAITPSP,B8,O,v3,Gait disorder consistent with PSP
374
- APRAXSP,B8,O,v3,Apraxia of speech
375
- APRAXL,B8,O,v3,Apraxia consistent with CbS - left side
376
- APRAXR,B8,O,v3,Apraxia consistent with CbS - right side
377
- CORTSENL,B8,O,v3,Cortical sensory deficits consistent with CbS - left side
378
- CORTSENR,B8,O,v3,Cortical sensory deficits consistent with CbS - right side
379
- ATAXL,B8,O,v3,Ataxia consistent with CbS - left side
380
- ATAXR,B8,O,v3,Ataxia consistent with CbS - right side
381
- ALIENLML,B8,O,v3,Alien limb consistent with CbS - left side
382
- ALIENLMR,B8,O,v3,Alien limb consistent with CbS - right side
383
- DYSTONL,B8,O,v3,"Dystonia consistent with CbS, PSP, or related disorder - left side"
384
- DYSTONR,B8,O,v3,"Dystonia consistent with CbS, PSP, or related disorder - right side"
385
- MYOCLLT,B8,O,v3,Myoclonus consistent with CbS - left side
386
- MYOCLRT,B8,O,v3,Myoclonus consistent with CbS - right side
387
- ALSFIND,B8,O,v3,"Findings suggesting ALS (e.g., muscle wasting, fasciculations, upper motor and/or lower motor neuron signs)"
388
- GAITNPH,B8,O,v3,Normal pressure hydrocephalus - gait apraxia
389
- OTHNEUR,B8,O,v3,"Other findings (e.g., cerebella ataxia, chorea, myoclonus)"
390
- OTHNEURX,B8,O,v3,Other findings (specify)
391
- B9CHG,B9,O,v1,Indicate changes in information reported at previous visit
392
- DECSUB,B9,O,v1-3,Does the subject report a decline in memory (relative to previously attained abilities)?
393
- DECIN,B9,O,v1-3,Does the co-participant report a decline in subject's memory (relative to previously attained abilities)?
394
- DECCLIN,B9,O,v1-2,"Clinician believes there is a meaningful decline in memory, non-memory cognitive abilities, behavior, ability to manage his/her affairs, or there are motor/movement changes"
395
- DECCLCOG,B9,O,v3,"based on the clinician's judgment, is the subject currently experiencing meaningful impairment in cognition?"
396
- COGMEM,B9,O,v1-3,"Indicate whether the subject currently is meaningfully impaired, relative to previously attained abilities, in memory"
397
- COGORI,B9,O,v3,"Indicate whether the subject is meaningfully impaired, relative to previously attained abilities, in orientation"
398
- COGJUDG,B9,O,v1-3,"Indicate whether the subject currently is meaningfully impaired, relative to previously attained abilities, in executive function - judgment, planning, or problem-solving"
399
- COGLANG,B9,O,v1-3,"Indicate whether the subject currently is meaningfully impaired, relative to previously attained abilities, in language"
400
- COGVIS,B9,O,v1-3,"Indicate whether the subject currently is meaningfully impaired, relative to previously attained abilities, in visuospatial function"
401
- COGATTN,B9,O,v1-3,"Indicate whether the subject currently is meaningfully impaired, relative to previously attained abilities, in attention or concentration"
402
- COGFLUC,B9,O,v2-3,Indicate whether the subject currently has fluctuating cognition
403
- COGFLAGO,B9,O,v3,At what age did the fluctuating cognition begin?
404
- COGOTHR,B9,O,v1-3,"Indicate whether the subject currently is meaningfully impaired, relative to previously attained abilities, in other cognitive domains"
405
- COGOTHRX,B9,O,v1-3,Specification of other cognitive impairment
406
- NACCCOGF,B9,D,v1-3,Indicate the predominant symptom that was first recognized as a decline in the subject's cognition
407
- NACCCGFX,B9,D,v1-3,Specification for other predominant symptom first recognized as a decline in the subject's cognition
408
- COGMODE,B9,O,v1-3,Mode of onset of cognitive symptoms
409
- COGMODEX,B9,O,v1-3,Specification for other mode of onset of cognitive symptoms
410
- DECAGE,B9,O,v1-3,"based on clinician's assessment, at what age did the cognitive decline begin?"
411
- DECCLBE,B9,O,v3,"based on clinician's judgment, is the subject currently experiencing any kind of behavioral symptoms?"
412
- BEAPATHY,B9,O,v1-3,"Subject currently manifests meaningful change in behavior - Apathy, withdrawal"
413
- BEDEP,B9,O,v1-3,Subject currently manifests meaningful change in behavior - Depressed mood
414
- BEVHALL,B9,O,v1-3,Subject currently manifests meaningful change in behavior - Psychosis - Visual hallucinations
415
- BEVWELL,B9,O,v2-3,"If yes, are the hallucinations well-formed and detailed?"
416
- BEVHAGO,B9,O,v3,"If well-formed, clear-cut visual hallucinations, at what age did these hallucinations begin?"
417
- BEAHALL,B9,O,v1-3,Subject currently manifests meaningful change in behavior - Psychosis - Auditory hallucinations
418
- BEDEL,B9,O,v1-3,"Subject currently manifests meaningful change in behavior - Psychosis - Abnormal, false, or delusional beliefs"
419
- BEDISIN,B9,O,v1-3,Subject currently manifests meaningful change in behavior - Disinhibition
420
- BEIRRIT,B9,O,v1-3,Subject currently manifests meaningful change in behavior - Irritability
421
- BEAGIT,B9,O,v1-3,Subject currently manifests meaningful change in behavior - Agitation
422
- BEPERCH,B9,O,v1-3,Subject currently manifests meaningful change in behavior - Personality change
423
- BEREM,B9,O,v2-3,Subject currently manifests meaningful change in behavior - REM sleep behavior disorder
424
- BEREMAGO,B9,O,v3,"If yes, at what age did the REM sleep behavior disorder begin?"
425
- BEANX,B9,O,v3,Subject currently manifests meaningful change in behavior - Anxiety
426
- BEOTHR,B9,O,v1-3,Subject currently manifests meaningful change in behavior - Other
427
- BEOTHRX,B9,O,v1-3,"Subject currently manifests meaningful change in behavior - Other, specify"
428
- NACCBEHF,B9,D,v1-3,Indicate the predominant symptom that was first recognized as a decline in the subject's behavior
429
- NACCBEFX,B9,D,v1-3,Specification of other predominant symptom that was first recognized as a decline in the subject's behavior
430
- BEMODE,B9,O,v1-3,Mode of onset of behavioral symptoms
431
- BEMODEX,B9,O,v1-3,Specification of other mode of onset of behavioral symptoms
432
- BEAGE,B9,O,v3,"based on the clinician's assessment, at what age did the behavioral symptoms begin?"
433
- DECCLMOT,B9,O,v3,"based on the clinician's judgment, is the subject currently experiencing any motor symptoms?"
434
- MOGAIT,B9,O,v1-3,Indicate whether the subject currently has meaningful changes in motor function - Gait disorder
435
- MOFALLS,B9,O,v1-3,Indicate whether the subject currently has meaningful changes in motor function - Falls
436
- MOTREM,B9,O,v1-3,Indicate whether the subject currently has meaningful changes in motor function - Tremor
437
- MOSLOW,B9,O,v1-3,Indicate whether the subject currently has meaningful changes in motor function - Slowness
438
- NACCMOTF,B9,D,v1-3,Indicate the predominant symptom that was first recognized as a decline in the subject's motor function
439
- MOMODE,B9,O,v1-3,Mode of onset of motor symptoms
440
- MOMODEX,B9,O,v1-3,Specification for other mode of onset of motor symptoms
441
- MOMOPARK,B9,O,v2-3,Were changes in motor function suggestive of Parkinsonism?
442
- PARKAGE,B9,O,v3,"If yes, at what age did the motor symptoms suggestive of Parkinsonism begin?"
443
- MOMOALS,B9,O,v3,Were changes in motor function suggestive of amyotrophic lateral sclerosis?
444
- ALSAGE,B9,O,v3,"If yes, at what age did the motor symptoms suggestive of ALS begin?"
445
- MOAGE,B9,O,v3,"based on the clinician's assessment, at what age did the motor changes begin?"
446
- COURSE,B9,O,v1-3,Overall course of decline of cognitive/ behavioral/motor syndrome
447
- FRSTCHG,B9,O,v1-3,Indicate the predominant domain that was first recognized as changed in the subject
448
- LBDEVAL,B9,O,v3,Is the subject a potential candidate for further evaluation for Lewy body disease?
449
- FTLDEVAL,B9,O,v3,Is the subject a potential candidate for further evaluation for frontotemporal lobar degeneration?
450
- MMSECOMP,C1,O,v3,Was any part of the MMSE completed?
451
- MMSELOC,C1,O,v1-3,Administration of the MMSE was:
452
- MMSELAN,C1,O,v1-3,Language of MMSE administration
453
- MMSELANX,C1,O,v1-3,Language of MMSE administration - Other (specify)
454
- MMSEVIS,C1,O,v3,Subject was unable to complete one or more sections due to visual impairment
455
- MMSEHEAR,C1,O,v3,Subject was unable to complete one or more sections due to hearing impairment
456
- MMSEORDA,C1,O,v1-3,Orientation subscale score - Time
457
- MMSEORLO,C1,O,v1-3,Orientation subscale score - Place
458
- PENTAGON,C1,O,v2-3,Intersecting pentagon subscale score
459
- NACCMMSE,C1,D,v1-3,Total MMSE score (using D-L-R-O-W)
460
- NPSYCLOC,"C1, C2",O,v1-3,The remainder of the battery was administered:
461
- NPSYLAN,"C1, C2, C2T",O,v1-3,Language of test administration
462
- NPSYLANX,"C1, C2, C2T",O,v1-3,Language of test administration - Other (specify)
463
- LOGIMO,C1,O,v1-3,"If this test has been administered to the subject within the past 3 months, specify the date previously administered (month)"
464
- LOGIDAY,C1,O,v1-3,"If this test has been administered to the subject within the past 3 months, specify the date previously administered (day)"
465
- LOGIYR,C1,O,v1-3,"If this test has been administered to the subject within the past 3 months, specify the date previously administered (year)"
466
- LOGIPREV,C1,O,v1-3,Total score from the previous test administration
467
- LOGIMEM,C1,O,v1-3,Total number of story units recalled from this current test administration
468
- MEMUNITS,C1,O,v1-3,Logical Memory IIA - Delayed - Total number of story units recalled
469
- MEMTIME,C1,O,v1-3,Logical Memory IIA - Delayed - Time elapsed since Logical Memory IA - Immediate
470
- UDSBENTC,"C1, C2",O,v3,Total score for copy of benson figure
471
- UDSBENTD,"C1, C2",O,v3,Total score for 10- to 15-minute delayed drawing of benson figure
472
- UDSBENRS,"C1,C2",O,v3,Recognized original stimulus from among four options
473
- DIGIF,C1,O,v1-3,Digit span forward trials correct
474
- DIGIFLEN,C1,O,v1-3,Digit span forward length
475
- DIGIB,C1,O,v1-3,Digit span backward trials correct
476
- DIGIBLEN,C1,O,v1-3,Digit span backward length
477
- ANIMALS,"C1, C2, C2T",O,v1-3,Animals - Total number of animals named in 60 seconds
478
- VEG,"C1, C2, C2T",O,v1-3,Vegetable - Total number of vegetables named in 60 seconds
479
- TRAILA,"C1, C2",O,v1-3,Trail Making Test Part A - Total number of seconds to complete
480
- TRAILARR,"C1, C2",O,v2-3,Part A - Number of commission errors
481
- TRAILALI,"C1, C2",O,v2-3,Part A - Number of correct lines
482
- TRAILB,"C1, C2",O,v1-3,Trail Making Test Part b - Total number of seconds to complete
483
- TRAILBRR,"C1, C2",O,v2-3,Part b - Number of commission errors
484
- TRAILBLI,"C1, C2",O,v2-3,Part b - Number of correct lines
485
- WAIS,C1,O,v1-2,WAIS-R Digit Symbol
486
- BOSTON,C1,O,v1-3,boston Naming Test (30) - Total score
487
- UDSVERFC,"C1, C2, C2T",O,v3,Number of correct F-words generated in 1 minute
488
- UDSVERFN,"C1, C2, C2T",O,v3,Number of F-words repeated in 1 minute
489
- UDSVERNF,"C1, C2, C2T",O,v3,Number of non-F-words and rule violation errors in 1 minute
490
- UDSVERLC,"C1, C2, C2T",O,v3,Number of correct L-words generated in 1 minute
491
- UDSVERLR,"C1, C2, C2T",O,v3,Number of L-words repeated in 1 minute
492
- UDSVERLN,"C1, C2, C2T",O,v3,Number of non-L-words and rule violation errors in 1 minute
493
- UDSVERTN,"C1, C2, C2T",O,v3,Total number of correct F-words and L-words
494
- UDSVERTE,"C1, C2, C2T",O,v3,Total number of F-word and L-word repetition errors
495
- UDSVERTI,"C1, C2, C2T",O,v3,Total number of non-F/L-words and rule violation errors
496
- COGSTAT,"C1, C2, C2T",O,v1-3,"Per clinician, based on the neuropsychological examination, the subject's cognitive status is deemed"
497
- NACCC1,C1,D,v1-3,Form date discrepancy between UDS Form A1 and Form C1
498
- MOCACOMP,"C2, C2T",O,v3,Was any part of MoCA administered?
499
- MOCAREAS,"C2, C2T",O,v3,"If no part of MoCA administered, reason code"
500
- MOCALOC,C2,O,v3,Where was MoCA administered?
501
- MOCALAN,"C2, C2T",O,v3,Language of MoCA administration
502
- MOCALANX,"C2, C2T",O,v3,"Language of MoCA administration - Other, specify"
503
- MOCAVIS,C2,O,v3,Subject was unable to complete one or more sections due to visual impairment
504
- MOCAHEAR,"C2, C2T",O,v3,Subject was unable to complete one or more sections due to hearing impairment
505
- MOCATOTS,C2,O,v3,MoCA Total Raw Score - uncorrected
506
- NACCMOCA,C2,D,v3,MoCA Total Score - corrected for education
507
- MOCATRAI,C2,O,v3,MoCA: Visuospatial/executive - Trails
508
- MOCACUBE,C2,O,v3,MoCA: Visuospatial/executive - Cube
509
- MOCACLOC,C2,O,v3,MoCA: Visuospatial/executive - Clock contour
510
- MOCACLON,C2,O,v3,MoCA: Visuospatial/executive - Clock numbers
511
- MOCACLOH,C2,O,v3,MoCA: Visuospatial/executive - Clock hands
512
- MOCANAMI,C2,O,v3,MoCA: Language - Naming
513
- MOCAREGI,C2,O,v3,MoCA: Memory - Registration (two trials)
514
- MOCADIGI,"C2, C2T",O,v3,MoCA: Attention - Digits
515
- MOCALETT,"C2, C2T",O,v3,MoCA: Attention - Letter A
516
- MOCASER7,"C2, C2T",O,v3,MoCA: Attention - Serial 7s
517
- MOCAREPE,"C2, C2T",O,v3,MoCA: Language - Repetition
518
- MOCAFLUE,"C2, C2T",O,v3,MoCA: Language - Fluency
519
- MOCAABST,"C2, C2T",O,v3,MoCA: Abstraction
520
- MOCARECN,"C2, C2T",O,v3,MoCA: Delayed recall - No cue
521
- MOCARECC,"C2, C2T",O,v3,MoCA: Delayed recall - Category cue
522
- MOCARECR,"C2, C2T",O,v3,MoCA: Delayed recall - Recognition
523
- MOCAORDT,"C2, C2T",O,v3,MoCA: Orientation - Date
524
- MOCAORMO,"C2, C2T",O,v3,MoCA: Orientation - Month
525
- MOCAORYR,"C2, C2T",O,v3,MoCA: Orientation - Year
526
- MOCAORDY,"C2, C2T",O,v3,MoCA: Orientation - Day
527
- MOCAORPL,"C2, C2T",O,v3,MoCA: Orientation - Place
528
- MOCAORCT,"C2, C2T",O,v3,MoCA: Orientation - City
529
- CRAFTVRS,"C2, C2T",O,v3,"Craft Story 21 Recall (Immediate) - Total story units recalled, verbatim scoring"
530
- CRAFTURS,"C2, C2T",O,v3,"Craft Story 21 Recall (Immediate) - Total story units recalled, paraphrase scoring"
531
- DIGFORCT,"C2, C2T",O,v3,Number Span Test: Forward - Number of correct trials
532
- DIGFORSL,"C2, C2T",O,v3,Number Span Test: Forward - Longest span forward
533
- DIGBACCT,"C2, C2T",O,v3,Number Span Test: backward - Number of correct trials
534
- DIGBACLS,"C2, C2T",O,v3,Number Span Test: backward - Longest span backward
535
- CRAFTDVR,"C2, C2T",O,v3,"Craft Story 21 Recall (Delayed) - Total story units recalled, verbatim scoring"
536
- CRAFTDRE,"C2, C2T",O,v3,"Craft Story 21 Recall (Delayed) - Total story units recalled, paraphrase scoring"
537
- CRAFTDTI,"C2, C2T",O,v3,Craft Story 21 Recall (Delayed) - Delay time
538
- CRAFTCUE,"C2, C2T",O,v3,Craft Story 21 Recall (Delayed) - Cue (boy) needed
539
- MINTTOTS,C2,O,v3,Multilingual Naming Test (MINT) - Total score
540
- MINTTOTW,C2,O,v3,Multilingual Naming Test (MINT) - Total correct without semantic cue
541
- MINTSCNG,C2,O,v3,Multilingual Naming Test (MINT) - Semantic cues: Number given
542
- MINTSCNC,C2,O,v3,Multilingual Naming Test (MINT) - Semantic cues: Number correct with cue
543
- MINTPCNG,C2,O,v3,Multilingual Naming Test (MINT) - Phonemic cues: Number given
544
- MINTPCNC,C2,O,v3,Multilingual Naming Test (MINT) - Phonemic cues: Number correct with cue
545
- NACCC2,C2,D,v3,Form date discrepancy between UDS Form A1 and Form C2
546
- MODCOMM,C2T,O,v3,Modality of communication used to administer neuropsychological battery
547
- MOCBTOTS,C2T,O,v3,MoCA blind Total raw score - uncorrected
548
- NACCMOCB,C2T,D,v3,MoCA-blind Total Score - corrected for education
549
- REY1REC,C2T,O,v3,Rey Auditory Verbal Learning: Trial 1 total recall
550
- REY1INT,C2T,O,v3,Rey Auditory Verbal Learning: Trial 1 intrusions
551
- REY2REC,C2T,O,v3,Rey Auditory Verbal Learning: Trial 2 total recall
552
- REY2INT,C2T,O,v3,Rey Auditory Verbal Learning: Trial 2 intrusions
553
- REY3REC,C2T,O,v3,Rey Auditory Verbal Learning: Trial 3 total recall
554
- REY3INT,C2T,O,v3,Rey Auditory Verbal Learning: Trial 3 intrusions
555
- REY4REC,C2T,O,v3,Rey Auditory Verbal Learning: Trial 4 total recall
556
- REY4INT,C2T,O,v3,Rey Auditory Verbal Learning: Trial 4 intrusions
557
- REY5REC,C2T,O,v3,Rey Auditory Verbal Learning: Trial 5 total recall
558
- REY5INT,C2T,O,v3,Rey Auditory Verbal Learning: Trial 5 intrusions
559
- REY6REC,C2T,O,v3,Rey Auditory Verbal Learning: Trial 6 total recall
560
- REY6INT,C2T,O,v3,Rey Auditory Verbal Learning: Trial 6 intrusions
561
- OTRAILA,C2T,O,v3,Oral Trail Making Test - Part A: Total number of seconds to complete
562
- OTRLARR,C2T,O,v3,Oral Trail Making Test - Part A: Number of commission errors
563
- OTRLALI,C2T,O,v3,Oral Trail Making Test - Part A: Number of correct lines
564
- OTRAILB,C2T,O,v3,Oral Trail Making Test Part b: Total number of seconds to complete
565
- OTRLBRR,C2T,O,v3,Oral Trail Making Test Part b: Number of commission errors
566
- OTRLBLI,C2T,O,v3,Oral Trail Making Test Part b: Number of correct lines
567
- REYDREC,C2T,O,v3,Rey Auditory Verbal Learning: total delayed recall
568
- REYDINT,C2T,O,v3,Rey Auditory Verbal Learning: delayed intrusions
569
- REYTCOR,C2T,O,v3,Rey Auditory Verbal Learning: recognition total correct
570
- REYFPOS,C2T,O,v3,Rey Auditory Verbal Learning: recognition total false positives
571
- VNTTOTW,C2T,O,v3,Verbal naming test: total correct without a cue
572
- VNTPCNC,C2T,O,v3,Verbal naming test: total correct with a phonemic cue
573
- RESPVAL,C2T,O,v3,How valid do you think the participant's responses are?
574
- RESPHEAR,C2T,O,v3,What makes this participant's responses less valid? Hearing impairment
575
- RESPDIST,C2T,O,v3,What makes this participant's responses less valid? Distractions
576
- RESPINTR,C2T,O,v3,What makes this participant's responses less valid? Interruptions
577
- RESPDISN,C2T,O,v3,What makes this participant's responses less valid? Lack of effort or disinterest
578
- RESPFATG,C2T,O,v3,What makes this participant's responses less valid? Fatigue
579
- RESPEMOT,C2T,O,v3,What makes this participant's responses less valid? Emotional issues
580
- RESPASST,C2T,O,v3,What makes this participant's responses less valid? Unapproved assistance
581
- RESPOTH,C2T,O,v3,What makes this participant's responses less valid? Other
582
- RESPOTHX,C2T,O,v3,What makes this participant's responses less valid? Other (specify)
583
- WHODIDDX,D1,O,v1-2,Who did diagnosis
584
- DXMETHOD,D1,O,v3,Diagnosis method
585
- NORMCOG,D1,O,v1-3,Normal cognition and behavior
586
- DEMENTED,D1,O,v1-3,Met criteria for dementia
587
- NACCUDSD,D1,D,v1-3,Cognitive status at UDS visit
588
- AMNDEM,D1,O,v3,Dementia syndrome - Amnestic multidomain dementia syndrome
589
- PCA,D1,O,v3,Dementia syndrome - Posterior cortical atrophy syndrome (or primary visual presentation)
590
- NACCPPA,D1,D,v1-3,Primary progressive aphasia (PPA) with cognitive impairment
591
- NACCPPAG,D1,D,v3,Dementia syndrome - Primary progressive aphasia (PPA) subtype according to the criteria outlined by Gorno-Tempini et al. 2011
592
- NACCPPME,D1,D,v1-2,Primary progressive aphasia (PPA) subtype according to older criteria outlined by Mesulam et al (2001 and 2003)
593
- NACCBVFT,D1,D,v1-3,Dementia syndrome - behavioral variant FTD syndrome (bvFTD)
594
- NACCLBDS,D1,D,v1-3,Dementia syndrome - Lewy body dementia syndrome
595
- NAMNDEM,D1,O,v3,"Dementia syndrome - Non-amnestic multidomain dementia, not PCA, PPA, bvFTD, or DLb syndrome"
596
- NACCTMCI,D1,D,v1-3,Mild cognitive impairment (MCI) type
597
- NACCMCIL,D1,D,v1-3,MCI domain affected - language
598
- NACCMCIA,D1,D,v1-3,MCI domain affected - attention
599
- NACCMCIE,D1,D,v1-3,MCI domain affected - executive function
600
- NACCMCIV,D1,D,v1-3,MCI domain affected - visuospatial
601
- IMPNOMCI,D1,O,v1-3,"Cognitively impaired, not MCI"
602
- AMYLPET,D1,O,v3,Abnormally elevated amyloid on PET
603
- AMYLCSF,D1,O,v3,Abnormally low amyloid in CSF
604
- FDGAD,D1,O,v3,FDG-PET pattern of AD
605
- HIPPATR,D1,O,v3,Hippocampal atrophy
606
- TAUPETAD,D1,O,v3,Tau PET evidence for AD
607
- CSFTAU,D1,O,v3,Abnormally elevated CSF Tau or pTau
608
- FDGFTLD,D1,O,v3,FDG-PET evidence for frontal or anterior temporal hypometabolism for FTLD
609
- TPETFTLD,D1,O,v3,Tau PET evidence for FTLD
610
- MRFTLD,D1,O,v3,Structural MR evidence for frontal or anterior temporal atrophy for FTLD
611
- DATSCAN,D1,O,v3,Dopamine transporter scan (DATscan) evidence for Lewy body disease
612
- OTHBIOM,D1,O,v3,biomarker findings - Other
613
- OTHBIOMX,D1,O,v3,biomarker findings - Other (specify)
614
- IMAGLINF,D1,O,v3,Large vessel infarct(s)
615
- IMAGLAC,D1,O,v3,Lacunar infarct(s)
616
- IMAGMACH,D1,O,v3,Macrohemorrhage(s)
617
- IMAGMICH,D1,O,v3,Microhemorrhage(s)
618
- IMAGMWMH,D1,O,v3,Moderate white-matter hyperintensity (CHS score 5-6)
619
- IMAGEWMH,D1,O,v3,Extensive white-matter hyperintensity (CHS score 7-8)
620
- OTHMUT,D1,O,v3,Does the subject have a hereditary mutation other than an AD or FTLD mutation?
621
- OTHMUTX,D1,O,v3,"Other mutation, specify"
622
- NACCALZD,D1,D,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Alzheimer's disease
623
- NACCALZP,D1,D,v1-3,"Primary, contributing, or non-contributing cause of observed cognitive impairment - Alzheimer's disease (AD)"
624
- PROBAD,D1,O,v1-2,Presumptive etiologic diagnosis of the cognitive disorder - Probable Alzheimer's disease
625
- PROBADIF,D1,O,v1-2,"Primary, contributing, or non-contributing cause of cognitive impairment - Probable Alzheimer's disease"
626
- POSSAD,D1,O,v1-2,Presumptive etiologic diagnosis of the cognitive disorder - Possible Alzheimer's disease
627
- POSSADIF,D1,O,v1-2,"Primary, contributing, or non-contributing cause of cognitive impairment - Possible Alzheimer's disease"
628
- NACCLBDE,D1,D,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Lewy body disease
629
- NACCLBDP,D1,D,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Lewy body disease (LbD)"
630
- PARK,D1,O,v1-3,Parkinson's disease present
631
- MSA,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Multiple system atrophy (MSA)
632
- MSAIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - Multiple system atrophy (MSA)"
633
- PSP,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - primary supranuclear palsy (PSP)
634
- PSPIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Primary supranuclear palsy (PSP)"
635
- CORT,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Corticobasal degeneration (CbD)
636
- CORTIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Corticobasal degeneration (CbD)"
637
- FTLDMO,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - FTLD with motor neuron disease (MND)
638
- FTLDMOIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - FTLD with motor neuron disease (MND)"
639
- FTLDNOS,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - FTLD not otherwise specified (NOS)
640
- FTLDNOIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - FTLD not otherwise specified (NOS)"
641
- FTD,D1,O,v1-2,Presence of behavioral frontotemporal dementia (bvFTD)
642
- FTDIF,D1,O,v1-2,"Primary, contributing, or non-contributing cause of cognitive impairment - behavioral frontotemporal dementia (bvFTD)"
643
- PPAPH,D1,O,v1-2,Presumptive etiologic diagnosis of the cognitive disorder - Primary progressive aphasia (PPA)
644
- PPAPHIF,D1,O,v1-2,"Primary, contributing, or non-contributing cause of cognitive impairment - primary progressive aphasia (PPA)"
645
- FTLDSUBT,D1,O,v3,FTLD subtype
646
- FTLDSUBX,D1,O,v3,"Other FTLD subtype, specify"
647
- CVD,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Vascular brain injury (VbI)
648
- CVDIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - vascular brain injury"
649
- PREVSTK,D1,O,v3,Previous symptomatic stroke
650
- STROKDEC,D1,O,v3,Temporal relationship between stroke and cognitive decline
651
- STKIMAG,D1,O,v3,Confirmation of stroke by neuroimaging
652
- INFNETW,D1,O,v3,Imaging evidence of cystic infarction in cognitive network(s)
653
- INFWMH,D1,O,v3,"Imaging evidence of cystic infarction, imaging evidence of extensive white matter hyperintensity (CHS grade 7-8+), and impairment in executive function"
654
- VASC,D1,O,v1-2,Presumptive etiologic diagnosis of the cognitive disorder - Probable vascular dementia (NINDS/AIREN criteria)
655
- VASCIF,D1,O,v1-2,"Primary, contributing, or non-contributing cause of cognitive impairment - Probable vascular dementia (NINDS/AIREN criteria)"
656
- VASCPS,D1,O,v2,Presumptive etiologic diagnosis of the cognitive disorder - Possible vascular dementia (NINDS/AIREN criteria)
657
- VASCPSIF,D1,O,v2,"Primary, contributing, or non-contributing cause of cognitive impairment - possible vascular dementia (NINDS/AIREN criteria)"
658
- STROKE,D1,O,v1-2,Presumptive etiologic diagnosis of the cognitive disorder - Stroke
659
- STROKIF,D1,O,v1-2,"Primary, contributing, or non-contributing cause of cognitive impairment - stroke"
660
- ESSTREM,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Essential tremor
661
- ESSTREIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - Essential tremor"
662
- DOWNS,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Down syndrome
663
- DOWNSIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Down syndrome"
664
- HUNT,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Huntington's disease
665
- HUNTIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Huntington's disease"
666
- PRION,D1,O,v1-3,"Presumptive etiologic diagnosis of the cognitive disorder - Prion disease (CJD, other)"
667
- PRIONIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Prion disease (CJD, other)"
668
- BRNINJ,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Traumatic brain injury (TbI)
669
- BRNINJIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Traumatic brain injury (TbI)"
670
- BRNINCTE,D1,O,v3,Symptoms consistent with chronic traumatic encephalopathy (CTE)
671
- HYCEPH,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Normal-pressure hydrocephalus (NPH)
672
- HYCEPHIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Normal-pressure hydrocephalus (NPH)"
673
- EPILEP,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Epilepsy
674
- EPILEPIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - Epilepsy"
675
- NEOP,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - CNS neoplasm
676
- NEOPIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - CNS neoplasm"
677
- NEOPSTAT,D1,O,v3,CNS neoplasm - benign or malignant
678
- HIV,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Human immunodeficiency virus (HIV)
679
- HIVIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - HIV"
680
- OTHCOG,D1,O,v3,"Presumptive etiologic diagnosis of the cognitive disorder - Other neurological, genetic, or infectious condition"
681
- OTHCOGIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - Other neurological, genetic, or infectious condition"
682
- OTHCOGX,D1,O,v3,"Presumptive etiologic diagnosis of the cognitive disorder - Other neurological, genetic, or infectious conditions (specify)"
683
- DEP,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Depression
684
- DEPIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Depression"
685
- DEPTREAT,D1,O,v3,Depression - Treated or untreated
686
- BIPOLDX,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - bipolar disorder
687
- BIPOLDIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - bipolar disorder"
688
- SCHIZOP,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Schizophrenia or other psychosis
689
- SCHIZOIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - Schizophrenia or other psychosis"
690
- ANXIET,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Anxiety
691
- ANXIETIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - Anxiety"
692
- DELIR,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Delirium
693
- DELIRIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - Delirium"
694
- PTSDDX,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Post-traumatic stress disorder (PTSD)
695
- PTSDDXIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - PTSD"
696
- OTHPSY,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Other psychiatric disease
697
- OTHPSYIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Other psychiatric disease"
698
- OTHPSYX,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Other psychiatric disease (specify)
699
- ALCDEM,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Cognitive impairment due to alcohol abuse
700
- ALCDEMIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Alcohol abuse"
701
- ALCABUSE,D1,O,v3,Current alcohol abuse
702
- IMPSUB,D1,O,v3,Presumptive etiologic diagnosis of the cognitive disorder - Cognitive impairment due to other substance abuse
703
- IMPSUBIF,D1,O,v3,"Primary, contributing, or non-contributing cause of cognitive impairment - Other substance abuse"
704
- DYSILL,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Cognitive impairment due to systemic disease/ medical illness
705
- DYSILLIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - systemic disease/ medical illness"
706
- MEDS,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Cognitive impairment due to medications
707
- MEDSIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - medications"
708
- DEMUN,D1,O,v1-2,Presumptive etiologic diagnosis of the cognitive disorder - Undetermined etiology
709
- DEMUNIF,D1,O,v1-2,"Primary, contributing, or non-contributing cause of cognitive impairment - Undetermined etiology"
710
- COGOTH,D1,O,v1-3,Presumptive etiologic diagnosis of the cognitive disorder - Other 1 (specify)
711
- COGOTHIF,D1,O,v1-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Other1 (specify)"
712
- COGOTHX,D1,O,v1-3,"Other presumptive etiologic diagnosis of the cognitive disorder 1, specify"
713
- COGOTH2,D1,O,v2-3,Presumptive etiologic diagnosis of the cognitive disorder - Other 2 (specify)
714
- COGOTH2F,D1,O,v2-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Other 2 (specify)"
715
- COGOTH2X,D1,O,v2-3,"Other presumptive etiologic diagnosis of the cognitive disorder 2, specify"
716
- COGOTH3,D1,O,v2-3,Presumptive etiologic diagnosis of the cognitive disorder - Other 3 (specify)
717
- COGOTH3F,D1,O,v2-3,"Primary, contributing, or non-contributing cause of cognitive impairment - Other 3 (specify)"
718
- COGOTH3X,D1,O,v2-3,"Other presumptive etiologic diagnosis of the cognitive disorder 3, specify"
719
- NACCNORM,D1,D,v1-3,Normal cognition at all visits to date
720
- NACCIDEM,D1,D,v1-3,Incident dementia during UDS follow-up
721
- NACCMCII,D1,D,v1-3,Incident MCI during UDS follow-up
722
- NACCADMU,D1,D,v3,Does the subject have a dominantly inherited AD mutation?
723
- NACCFTDM,D1,D,v3,Does the subject have an hereditary FTLD mutation?
724
- NACCETPR,D1,D,v1-3,"Primary etiologic diagnosis (MCI); impaired, not MCI; or dementia"
725
- CANCER,D2,O,v3,"Cancer present in the last 12 months (excluding non-melanoma skin cancer), primary or metastatic"
726
- CANCSITE,D2,O,v3,Cancer primary site specification
727
- DIABET,D2,O,v3,Diabetes present at visit
728
- MYOINF,D2,O,v3,Myocardial infarct present within the past 12 months
729
- CONGHRT,D2,O,v3,Congestive heart failure present
730
- AFIBRILL,D2,O,v3,Atrial fibrillation present
731
- HYPERT,D2,O,v3,Hypertension present
732
- ANGINA,D2,O,v3,Angina present
733
- HYPCHOL,D2,O,v3,Hypercholesterolemia present
734
- VB12DEF,D2,O,v3,b12 deficiency present
735
- THYDIS,D2,O,v3,Thyroid disease present
736
- ARTH,D2,O,v3,Arthritis present
737
- ARTYPE,D2,O,v3,Arthritis type
738
- ARTYPEX,D2,O,v3,Other arthritis type specification
739
- ARTUPEX,D2,O,v3,Arthritis region affected - upper extremity
740
- ARTLOEX,D2,O,v3,Arthritis region affected - lower extremity
741
- ARTSPIN,D2,O,v3,Arthritis region affected - spine
742
- ARTUNKN,D2,O,v3,Arthritis region affected - unknown
743
- URINEINC,D2,O,v3,Incontinence present - urinary
744
- BOWLINC,D2,O,v3,Incontinence present - bowel
745
- SLEEPAP,D2,O,v3,Sleep apnea present
746
- REMDIS,D2,O,v3,REM sleep behavior disorder (RbD) present
747
- HYPOSOM,D2,O,v3,Hyposomnia/insomnia present
748
- SLEEPOTH,D2,O,v3,Other sleep disorder present
749
- SLEEPOTX,D2,O,v3,Other sleep disorder specification
750
- ANGIOCP,D2,O,v3,"Carotid procedure: angioplasty, endarterectomy, or stent within the past 12 months"
751
- ANGIOPCI,D2,O,v3,Percutaneous coronary intervention: angioplasty and/or stent within the past 12 months
752
- PACEMAKE,D2,O,v3,Procedure: pacemaker and/or defibrillator within the past 12 months
753
- HVALVE,D2,O,v3,Procedure: heart valve replacement or repair within the past 12 months
754
- ANTIENC,D2,O,v3,Antibody-mediated encephalopathy within the past 12 months
755
- ANTIENCX,D2,O,v3,"Antibody-mediated encephalopathy, specify"
756
- OTHCOND,D2,O,v3,Other medical conditions or procedures within the past 12 months not listed above
757
- OTHCONDX,D2,O,v3,Other medical conditions specification
758
- LANGA1,Z1X,O,v3,A1 Subject Demographics - language
759
- LANGA2,Z1X,O,v3,A2 Co-participant Demographics - language
760
- LANGA3,Z1X,O,v3,A3 Subject Family History - language
761
- LANGA4,Z1X,O,v3,A4 Subject Medications - language
762
- LANGA5,Z1X,O,v3,A5 Subject Health History - language
763
- LANGB1,Z1X,O,v3,B1 Evaluation Form: Physical - language
764
- LANGB4,Z1X,O,v3,B4 Global Staging - CDR: Standard and Supplemental - language
765
- LANGB5,Z1X,O,v3,B5 behavioral Assessment: NPI-Q - language
766
- LANGB6,Z1X,O,v3,B6 behavioral Assessment: GDS - language
767
- LANGB7,Z1X,O,v3,B7 Functional Assessment: FAS - language
768
- LANGB8,Z1X,O,v3,B8 Neurological Examination Findings - language
769
- LANGB9,Z1X,O,v3,B9 Clinician Judgment of Symptoms - language
770
- LANGC2,Z1X,O,v3,C2 Neuropsychological battery Scores - language
771
- LANGD1,Z1X,O,v3,D1 Clinician Diagnosis - language
772
- LANGD2,Z1X,O,v3,D2 Clinician-assessed Medical Conditions - language
773
- LANGB3F,Z1X,O,v3,B3F Supplemental UPDRS - language
774
- LANGB9F,Z1X,O,v3,B9F Clinical PPA and bvFTD Features - language
775
- LANGC1F,Z1X,O,v3,C1F Neuropsychological battery Summary Scores - language
776
- LANGC2F,Z1X,O,v3,C2F Social Norms Questionnaire - language
777
- LANGC3F,Z1X,O,v3,C3F Social behavior Observer Checklist - language
778
- LANGC4F,Z1X,O,v3,C4F behavioral Inhibition Scale - language
779
- LANGC5F,Z1X,O,v3,C5F Interpersonal Reactivity Index - language
780
- LANGC6F,Z1X,O,v3,C6F Revised Self-monitoring Scale - language
781
- LANGE2F,Z1X,O,v3,E2F Imaging Available - language
782
- LANGE3F,Z1X,O,v3,E3F Imaging in Diagnosis - language
783
- LANGCLS,Z1X,O,v3,CLS Subject Demographics - language
784
- CLSSUB,Z1X,O,v3,B3F Subject Demographics - language
785
- NACCSPNL,CLS,D,v3,Average Spanish level (average of Questions 6 - 9)
786
- NACCENGL,CLS,D,v3,Average English level (average of Questions 11 - 14)
787
- APREFLAN,CLS,O,v3,In what language do you prefer to be evaluated (English or Spanish)
788
- AYRSPAN,CLS,O,v3,How many years have you lived in an environment where people generally speak Spanish
789
- AYRENGL,CLS,O,v3,How many years have you lived in an environment where people generally speak English
790
- APCSPAN,CLS,O,v3,Please approximate the percentage of time during a normal/average day that you use Spanish
791
- APCENGL,CLS,O,v3,Please approximate the percentage of time during a normal/average day that you use English
792
- ASPKSPAN,CLS,O,v3,"In your opinion, what is your level of proficiency when you speak Spanish"
793
- AREASPAN,CLS,O,v3,"In your opinion, what is your level of proficiency when you read Spanish"
794
- AWRISPAN,CLS,O,v3,"In your opinion, what is your level of proficiency when you write in Spanish"
795
- AUNDSPAN,CLS,O,v3,"In your opinion, what is your level of proficiency for understanding spoken/ oral Spanish"
796
- ASPKENGL,CLS,O,v3,"In your opinion, what is your level of proficiency when you speak English"
797
- AREAENGL,CLS,O,v3,"In your opinion, what is your level of proficiency when you read English"
798
- AWRIENGL,CLS,O,v3,"In your opinion, what is your level of proficiency when you write in English"
799
- AUNDENGL,CLS,O,v3,"In your opinion, what is your level of proficiency for understanding spoken/ oral English"
800
- NACCFTD,U3,D,v3,One or more FTLD Module visits completed
801
- NACCLBDM,U3,D,v3,One or more LbD Module visits completed
802
- NACCNMRI,U3,D,v3,Total number of MRI sessions
803
- NACCMRSA,U3,D,v3,At least one MRI scan available
804
- NACCNAPA,U3,D,v3,Total number of amyloid PET scans available
805
- NACCAPSA,U3,D,v3,At least one amyloid PET scan available
806
- NACCACSF,U3,D,v3,One or more measures of Aβ1-42 reported
807
- NACCPCSF,U3,D,v3,One or more measures of P-tau181P reported
808
- NACCTCSF,U3,D,v3,One or more measures of T-tau reported
809
- NACCAUTP,U3,D,v3,Neuropathology data from an autopsy is available
810
- NACCNE4S,G1,D,,Number of APOE e4 alleles
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
data/nacc_variable_mappings.pkl ADDED
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data/{nacc_test_with_np_cli.csv → test.csv} RENAMED
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requirements.txt CHANGED
@@ -7,3 +7,4 @@ torch
7
  torchvision
8
  tqdm
9
  wandb
 
 
7
  torchvision
8
  tqdm
9
  wandb
10
+ pkl