| { | |
| "config":{ | |
| "model":"GleghornLab/cdsBERT", | |
| "model_args":"pretrained=GleghornLab/cdsBERT,revision=main,dtype=bfloat16", | |
| "num_fewshot":0, | |
| "batch_size":1, | |
| "batch_sizes":[ | |
| ], | |
| "device":"cpu", | |
| "no_cache":true, | |
| "limit":20, | |
| "bootstrap_iters":100000, | |
| "description_dict":{"Tokenization":"SNT", "# of Params":"420M", "Pretraining Data":"4M Sequences", "Species":"4,069 RNA families", "Nucleic Acid":"CDS"}, | |
| "model_dtype":"bfloat16", | |
| "model_name":"GleghornLab/cdsBERT", | |
| "model_sha":"main" | |
| }, | |
| "results":{ | |
| "PolyA":{ | |
| "F1":0.3972 | |
| }, | |
| "LncRNA":{ | |
| "F1":0.3306 | |
| }, | |
| "Chrom Acc":{ | |
| "F1":0.4895 | |
| }, | |
| "Prom Str":{ | |
| "RMSE":2.19 | |
| }, | |
| "Term Str":{ | |
| "RMSE":0.59 | |
| }, | |
| "Splice":{ | |
| "F1":0.5220 | |
| }, | |
| "Gene Exp":{ | |
| "RMSE":14.77 | |
| }, | |
| "Enhancer":{ | |
| "F1":0.3393 | |
| } | |
| } | |
| } |