from pathlib import Path import shutil from typing import Any, Dict from datasets import load_dataset from transformers import TrainingArguments from span_marker import SpanMarkerModel, Trainer from span_marker.model_card import SpanMarkerModelCardData import os os.environ["CODECARBON_LOG_LEVEL"] = "error" def main() -> None: # Load the dataset, ensure "tokens" and "ner_tags" columns, and get a list of labels dataset_id = "EMBO/SourceData" dataset_name = "SourceData" dataset = load_dataset(dataset_id, version="1.0.1").rename_columns({"labels": "ner_tags", "words": "tokens"}) labels = dataset["train"].features["ner_tags"].feature.names # Initialize a SpanMarker model using a pretrained BERT-style encoder encoder_id = "bert-base-uncased" model_id = f"tomaarsen/span-marker-{encoder_id}-sourcedata" model = SpanMarkerModel.from_pretrained( encoder_id, labels=labels, # SpanMarker hyperparameters: model_max_length=256, marker_max_length=128, entity_max_length=8, # Model card variables model_card_data=SpanMarkerModelCardData( model_id=model_id, encoder_id=encoder_id, dataset_name=dataset_name, dataset_id=dataset_id, license="cc-by-4.0", language="en", ), ) # Prepare the 🤗 transformers training arguments output_dir = Path("models") / model_id args = TrainingArguments( output_dir=output_dir, run_name=model_id, # Training Hyperparameters: learning_rate=5e-5, per_device_train_batch_size=32, per_device_eval_batch_size=32, num_train_epochs=3, weight_decay=0.01, warmup_ratio=0.1, bf16=True, # Replace `bf16` with `fp16` if your hardware can't use bf16. # Other Training parameters logging_first_step=True, logging_steps=50, evaluation_strategy="steps", save_strategy="steps", eval_steps=3000, save_total_limit=2, dataloader_num_workers=2, ) # Initialize the trainer using our model, training args & dataset, and train trainer = Trainer( model=model, args=args, train_dataset=dataset["train"], eval_dataset=dataset["validation"], ) trainer.train() # Compute & save the metrics on the test set metrics = trainer.evaluate(dataset["test"], metric_key_prefix="test") trainer.save_metrics("test", metrics) trainer.save_model(output_dir / "checkpoint-final") shutil.copy2(__file__, output_dir / "checkpoint-final" / "train.py") if __name__ == "__main__": main() # TODO: Embedding resizing & SpanMarkerModelCardData docs