name: medsam2 channels: - conda-forge - defaults dependencies: - _libgcc_mutex=0.1=main - _openmp_mutex=5.1=1_gnu - asttokens=2.4.1=pyhd8ed1ab_0 - bzip2=1.0.8=h5eee18b_6 - ca-certificates=2024.9.24=h06a4308_0 - comm=0.2.2=pyhd8ed1ab_0 - debugpy=1.6.7=py312h6a678d5_0 - decorator=5.1.1=pyhd8ed1ab_0 - exceptiongroup=1.2.2=pyhd8ed1ab_0 - executing=2.0.1=pyhd8ed1ab_0 - expat=2.6.2=h6a678d5_0 - importlib_metadata=8.2.0=hd8ed1ab_0 - ipykernel=6.29.5=pyh3099207_0 - ipython=8.26.0=pyh707e725_0 - jedi=0.19.1=pyhd8ed1ab_0 - jupyter_client=8.6.2=pyhd8ed1ab_0 - jupyter_core=5.7.2=py312h06a4308_0 - ld_impl_linux-64=2.38=h1181459_1 - libffi=3.4.4=h6a678d5_1 - libgcc-ng=11.2.0=h1234567_1 - libgomp=11.2.0=h1234567_1 - libsodium=1.0.18=h36c2ea0_1 - libstdcxx-ng=13.2.0=hc0a3c3a_7 - libuuid=1.41.5=h5eee18b_0 - matplotlib-inline=0.1.7=pyhd8ed1ab_0 - ncurses=6.4=h6a678d5_0 - nest-asyncio=1.6.0=pyhd8ed1ab_0 - openssl=3.0.15=h5eee18b_0 - packaging=24.1=pyhd8ed1ab_0 - parso=0.8.4=pyhd8ed1ab_0 - pexpect=4.9.0=pyhd8ed1ab_0 - pickleshare=0.7.5=py_1003 - pip=24.0=py312h06a4308_0 - platformdirs=4.2.2=pyhd8ed1ab_0 - prompt-toolkit=3.0.47=pyha770c72_0 - ptyprocess=0.7.0=pyhd3deb0d_0 - pure_eval=0.2.3=pyhd8ed1ab_0 - pygments=2.18.0=pyhd8ed1ab_0 - python=3.12.4=h5148396_1 - pyzmq=25.1.2=py312h6a678d5_0 - readline=8.2=h5eee18b_0 - setuptools=69.5.1=py312h06a4308_0 - six=1.16.0=pyh6c4a22f_0 - sqlite=3.45.3=h5eee18b_0 - stack_data=0.6.2=pyhd8ed1ab_0 - tk=8.6.14=h39e8969_0 - tornado=6.4.1=py312h5eee18b_0 - traitlets=5.14.3=pyhd8ed1ab_0 - typing_extensions=4.12.2=pyha770c72_0 - wcwidth=0.2.13=pyhd8ed1ab_0 - wheel=0.43.0=py312h06a4308_0 - xz=5.4.6=h5eee18b_1 - zeromq=4.3.5=h6a678d5_0 - zipp=3.19.2=pyhd8ed1ab_0 - zlib=1.2.13=h5eee18b_1 - pip: - acvl-utils==0.2 - antlr4-python3-runtime==4.9.3 - anyio==4.4.0 - argon2-cffi==23.1.0 - argon2-cffi-bindings==21.2.0 - argparse==1.4.0 - arrow==1.3.0 - async-lru==2.0.4 - asyncio-atexit==1.0.1 - attrs==23.2.0 - babel==2.15.0 - backoff==2.2.1 - batchgenerators==0.25 - batchgeneratorsv2==0.2 - beautifulsoup4==4.12.3 - bleach==6.1.0 - certifi==2024.7.4 - cffi==1.16.0 - charset-normalizer==3.3.2 - connected-components-3d==3.18.0 - contourpy==1.2.1 - cycler==0.12.1 - defusedxml==0.7.1 - deprecated==1.2.14 - dicom2nifti==2.4.11 - dynamic-network-architectures==0.3.1 - einops==0.8.0 - fastjsonschema==2.20.0 - fft-conv-pytorch==1.2.0 - filelock==3.15.4 - fonttools==4.53.1 - fqdn==1.5.1 - fsspec==2024.6.1 - future==1.0.0 - googleapis-common-protos==1.63.2 - h11==0.14.0 - httpcore==1.0.5 - httpx==0.27.0 - huggingface-hub==0.25.2 - hydra-core==1.3.2 - idna==3.7 - imagecodecs==2024.6.1 - imageio==2.34.2 - importlib-metadata==6.11.0 - iopath==0.1.10 - ipympl==0.9.4 - ipython-genutils==0.2.0 - ipywidgets==8.1.3 - isoduration==20.11.0 - jinja2==3.1.4 - joblib==1.4.2 - json5==0.9.25 - jsonpointer==3.0.0 - jsonschema==4.23.0 - jsonschema-specifications==2023.12.1 - jupyter-events==0.10.0 - jupyter-lsp==2.2.5 - jupyter-server==2.14.2 - jupyter-server-terminals==0.5.3 - jupyterlab==4.2.4 - jupyterlab-pygments==0.3.0 - jupyterlab-server==2.27.3 - jupyterlab-widgets==3.0.11 - kiwisolver==1.4.5 - lazy-loader==0.4 - linecache2==1.0.0 - markupsafe==2.1.5 - matplotlib==3.9.1 - mistune==3.0.2 - monai==1.3.2 - mpmath==1.3.0 - nbclient==0.10.0 - nbconvert==7.16.4 - nbformat==5.10.4 - networkx==3.3 - nibabel==5.2.1 - nnunetv2==2.5.1 - notebook-shim==0.2.4 - numpy==2.0.1 - nvidia-cublas-cu12==12.4.2.65 - nvidia-cuda-cupti-cu12==12.4.99 - nvidia-cuda-nvrtc-cu12==12.4.99 - nvidia-cuda-runtime-cu12==12.4.99 - nvidia-cudnn-cu12==9.1.0.70 - nvidia-cufft-cu12==11.2.0.44 - nvidia-curand-cu12==10.3.5.119 - nvidia-cusolver-cu12==11.6.0.99 - nvidia-cusparse-cu12==12.3.0.142 - nvidia-nccl-cu12==2.20.5 - nvidia-nvjitlink-cu12==12.4.99 - nvidia-nvtx-cu12==12.4.99 - omegaconf==2.3.0 - opencv-python==4.10.0.84 - opentelemetry-api==1.21.0 - opentelemetry-exporter-otlp-proto-common==1.21.0 - opentelemetry-exporter-otlp-proto-http==1.21.0 - opentelemetry-proto==1.21.0 - opentelemetry-sdk==1.21.0 - opentelemetry-semantic-conventions==0.42b0 - overrides==7.7.0 - pandas==2.2.2 - pandocfilters==1.5.1 - pillow==10.4.0 - portalocker==2.10.1 - prometheus-client==0.20.0 - protobuf==4.25.4 - psutil==5.9.8 - pycparser==2.22 - pydicom==2.4.4 - pyparsing==3.1.2 - python-dateutil==2.9.0.post0 - python-gdcm==3.0.24.1 - python-graphviz==0.20.3 - python-json-logger==2.0.7 - pytz==2024.1 - pyyaml==6.0.1 - referencing==0.35.1 - regex==2024.9.11 - requests==2.32.3 - rfc3339-validator==0.1.4 - rfc3986-validator==0.1.1 - rpds-py==0.19.1 - safetensors==0.4.5 - scikit-image==0.24.0 - scikit-learn==1.5.1 - scipy==1.14.0 - seaborn==0.13.2 - send2trash==1.8.3 - simpleitk==2.3.1 - sniffio==1.3.1 - soupsieve==2.5 - sympy==1.13.1 - synapseclient==4.4.0 - tensorboardx==2.6.2.2 - terminado==0.18.1 - threadpoolctl==3.5.0 - tifffile==2024.7.24 - tinycss2==1.3.0 - tokenizers==0.20.1 - torch==2.4.0+cu124 - torchaudio==2.4.0+cu124 - torchsummary==1.5.1 - torchvision==0.19.0+cu124 - tqdm==4.66.4 - traceback2==1.4.0 - transformers==4.45.2 - triton==3.0.0 - types-python-dateutil==2.9.0.20240316 - tzdata==2024.1 - unittest2==1.1.0 - uri-template==1.3.0 - urllib3==1.26.19 - webcolors==24.6.0 - webencodings==0.5.1 - websocket-client==1.8.0 - widgetsnbextension==4.0.11 - wrapt==1.16.0 - yacs==0.1.8 prefix: /data3/zc/misc/miniconda3/envs/medsam2