dnabert2-H3K27ac / flash_attn_triton.py
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Add DNABERT-2 model for H3K27ac prediction
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# Copyright 2022 MosaicML Examples authors
# SPDX-License-Identifier: Apache-2.0
"""Triton implementation of Flash Attention.
# Copyright (c) 2022, Tri Dao.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
*Experimental* implementation of FlashAttention in Triton.
We use the FlashAttention implementation from Phil Tillet a starting point.
https://github.com/openai/triton/blob/master/python/tutorials/06-fused-attention.py
Changes:
- Implement both causal and non-causal attention.
- Implement both self-attention and cross-attention.
- Support arbitrary seqlens (not just multiples of 128), for both forward and backward.
- Support all head dimensions up to 128 (not just 16, 32, 64, 128), for both forward and backward.
- Support attention bias.
- Speed up the forward pass a bit, and only store the LSE instead of m and l.
- Make the backward for d=128 much faster by reducing register spilling.
- Optionally parallelize the backward pass across seqlen_k, to deal with the case of
small batch size * nheads.
Caution:
- If you plan to use headdim other than 64 and 128, you should test for race conditions
(due to the Triton compiler), as done in tests/test_flash_attn.py
"test_flash_attn_triton_race_condition". I've tested and fixed many race conditions
for different head dimensions (40, 48, 64, 128, 80, 88, 96), but I'm still not 100% confident
that there are none left for other head dimensions.
Differences between this Triton version and the CUDA version:
- Triton version doesn't support dropout.
- Triton forward is generally faster than CUDA forward.
- Triton backward is faster than CUDA backward when batch * nheads is small, and when headdim=64.
It is slightly slower when headdim=128 and batch * nheads is large.
- Triton version doesn't yet support different sequence lengths in a batch (i.e., RaggedTensor/NestedTensor).
"""
import math
import torch
import triton # type: ignore (reportMissingImports)
import triton.language as tl # type: ignore (reportMissingImports)
from einops import repeat
@triton.autotune(
configs=[
triton.Config({
'BLOCK_M': 128,
'BLOCK_N': 128
},
num_warps=8,
num_stages=1),
# This config has a race condition when EVEN_M == False, disabling it for now.
# triton.Config({"BLOCK_M": 64, "BLOCK_N": 64}, num_warps=4, num_stages=1),
],
key=[
'CACHE_KEY_SEQLEN_Q', 'CACHE_KEY_SEQLEN_K', 'BIAS_TYPE', 'IS_CAUSAL',
'BLOCK_HEADDIM'
])
@triton.heuristics({
'EVEN_M': lambda args: args['seqlen_q'] % args['BLOCK_M'] == 0,
'EVEN_N': lambda args: args['seqlen_k'] % args['BLOCK_N'] == 0,
'EVEN_HEADDIM': lambda args: args['headdim'] == args['BLOCK_HEADDIM'],
})
@triton.jit
def _fwd_kernel(
Q,
K,
V,
Bias,
Out,
Lse,
TMP, # NOTE: TMP is a scratchpad buffer to workaround a compiler bug
softmax_scale,
stride_qb,
stride_qh,
stride_qm,
stride_kb,
stride_kh,
stride_kn,
stride_vb,
stride_vh,
stride_vn,
stride_bb,
stride_bh,
stride_bm,
stride_ob,
stride_oh,
stride_om,
nheads,
seqlen_q,
seqlen_k,
seqlen_q_rounded,
headdim,
CACHE_KEY_SEQLEN_Q,
CACHE_KEY_SEQLEN_K,
BIAS_TYPE: tl.constexpr,
IS_CAUSAL: tl.constexpr,
BLOCK_HEADDIM: tl.constexpr,
EVEN_M: tl.constexpr,
EVEN_N: tl.constexpr,
EVEN_HEADDIM: tl.constexpr,
BLOCK_M: tl.constexpr,
BLOCK_N: tl.constexpr,
):
start_m = tl.program_id(0)
off_hb = tl.program_id(1)
off_b = off_hb // nheads
off_h = off_hb % nheads
# off_b = tl.program_id(1)
# off_h = tl.program_id(2)
# off_hb = off_b * nheads + off_h
# initialize offsets
offs_m = start_m * BLOCK_M + tl.arange(0, BLOCK_M)
offs_n = tl.arange(0, BLOCK_N)
offs_d = tl.arange(0, BLOCK_HEADDIM)
# Initialize pointers to Q, K, V
# Adding parenthesis around indexing might use int32 math instead of int64 math?
# https://github.com/openai/triton/issues/741
# I'm seeing a tiny bit of difference (5-7us)
q_ptrs = Q + off_b * stride_qb + off_h * stride_qh + (
offs_m[:, None] * stride_qm + offs_d[None, :])
k_ptrs = K + off_b * stride_kb + off_h * stride_kh + (
offs_n[:, None] * stride_kn + offs_d[None, :])
v_ptrs = V + off_b * stride_vb + off_h * stride_vh + (
offs_n[:, None] * stride_vn + offs_d[None, :])
if BIAS_TYPE == 'vector':
b_ptrs = Bias + off_b * stride_bb + off_h * stride_bh + offs_n
elif BIAS_TYPE == 'matrix':
b_ptrs = Bias + off_b * stride_bb + off_h * stride_bh + (
offs_m[:, None] * stride_bm + offs_n[None, :])
else:
raise ValueError("BIAS_TYPE must be one of {'vector', 'matrix'}")
# initialize pointer to m and l
t_ptrs = TMP + off_hb * seqlen_q_rounded + offs_m
lse_i = tl.zeros([BLOCK_M], dtype=tl.float32) - float('inf')
m_i = tl.zeros([BLOCK_M], dtype=tl.float32) - float('inf')
acc_o = tl.zeros([BLOCK_M, BLOCK_HEADDIM], dtype=tl.float32)
# load q: it will stay in SRAM throughout
# [2022-10-30] TD: Triton bug - in the case of EVEN_M=True and EVEN_N=False, if we just call
# tl.load(q_ptrs), we get the wrong output!
if EVEN_M & EVEN_N:
if EVEN_HEADDIM:
q = tl.load(q_ptrs)
else:
q = tl.load(q_ptrs, mask=offs_d[None, :] < headdim, other=0.0)
else:
if EVEN_HEADDIM:
q = tl.load(q_ptrs, mask=offs_m[:, None] < seqlen_q, other=0.0)
else:
q = tl.load(q_ptrs,
mask=(offs_m[:, None] < seqlen_q) &
(offs_d[None, :] < headdim),
other=0.0)
# loop over k, v and update accumulator
end_n = seqlen_k if not IS_CAUSAL else tl.minimum(
(start_m + 1) * BLOCK_M, seqlen_k)
for start_n in range(0, end_n, BLOCK_N):
start_n = tl.multiple_of(start_n, BLOCK_N)
# -- compute qk ----
if EVEN_N & EVEN_M: # If we just do "if EVEN_N", there seems to be some race condition
if EVEN_HEADDIM:
k = tl.load(k_ptrs + start_n * stride_kn)
else:
k = tl.load(k_ptrs + start_n * stride_kn,
mask=offs_d[None, :] < headdim,
other=0.0)
else:
if EVEN_HEADDIM:
k = tl.load(k_ptrs + start_n * stride_kn,
mask=(start_n + offs_n)[:, None] < seqlen_k,
other=0.0)
else:
k = tl.load(k_ptrs + start_n * stride_kn,
mask=((start_n + offs_n)[:, None] < seqlen_k) &
(offs_d[None, :] < headdim),
other=0.0)
qk = tl.zeros([BLOCK_M, BLOCK_N], dtype=tl.float32)
qk += tl.dot(q, k, trans_b=True)
# Trying to combine the two masks seem to make the result wrong
if not EVEN_N: # Need to mask out otherwise the softmax is wrong
qk += tl.where((start_n + offs_n)[None, :] < seqlen_k, 0,
float('-inf'))
if IS_CAUSAL:
qk += tl.where(offs_m[:, None] >= (start_n + offs_n)[None, :], 0,
float('-inf'))
if BIAS_TYPE != 'none':
if BIAS_TYPE == 'vector':
if EVEN_N:
bias = tl.load(b_ptrs + start_n).to(tl.float32)
else:
bias = tl.load(b_ptrs + start_n,
mask=(start_n + offs_n) < seqlen_k,
other=0.0).to(tl.float32)
bias = bias[None, :]
elif BIAS_TYPE == 'matrix':
if EVEN_M & EVEN_N:
bias = tl.load(b_ptrs + start_n).to(tl.float32)
else:
bias = tl.load(b_ptrs + start_n,
mask=(offs_m[:, None] < seqlen_q) &
((start_n + offs_n)[None, :] < seqlen_k),
other=0.0).to(tl.float32)
else:
raise ValueError(
"BIAS_TYPE must be one of {'vector', 'matrix'}")
# Slightly faster to multiply the softmax_scale in the tl.exp below since the compiler
# can then fuse the mult and add into an fma instruction. But if we have bias we need to
# to multiply with softmax_scale here.
qk = qk * softmax_scale + bias
m_ij = tl.maximum(tl.max(qk, 1), lse_i)
p = tl.exp(qk - m_ij[:, None])
else:
m_ij = tl.maximum(tl.max(qk, 1) * softmax_scale, lse_i)
p = tl.exp(qk * softmax_scale - m_ij[:, None])
l_ij = tl.sum(p, 1)
# scale acc_o
acc_o_scale = tl.exp(m_i - m_ij)
# # -- update output accumulator --
# BUG: have to store and immediately load
tl.store(t_ptrs, acc_o_scale)
acc_o_scale = tl.load(t_ptrs)
acc_o = acc_o * acc_o_scale[:, None]
# update acc_o
if EVEN_N & EVEN_M: # If we just do "if EVEN_N", there seems to be some race condition
if EVEN_HEADDIM:
v = tl.load(v_ptrs + start_n * stride_vn)
else:
v = tl.load(v_ptrs + start_n * stride_vn,
mask=offs_d[None, :] < headdim,
other=0.0)
else:
if EVEN_HEADDIM:
v = tl.load(v_ptrs + start_n * stride_vn,
mask=(start_n + offs_n)[:, None] < seqlen_k,
other=0.0)
else:
v = tl.load(v_ptrs + start_n * stride_vn,
mask=((start_n + offs_n)[:, None] < seqlen_k) &
(offs_d[None, :] < headdim),
other=0.0)
p = p.to(v.dtype)
acc_o += tl.dot(p, v)
# -- update statistics
m_i = m_ij
l_i_new = tl.exp(lse_i - m_ij) + l_ij
lse_i = m_ij + tl.log(l_i_new)
o_scale = tl.exp(m_i - lse_i)
# BUG: have to store and immediately load
tl.store(t_ptrs, o_scale)
o_scale = tl.load(t_ptrs)
acc_o = acc_o * o_scale[:, None]
# rematerialize offsets to save registers
start_m = tl.program_id(0)
offs_m = start_m * BLOCK_M + tl.arange(0, BLOCK_M)
# write back l and m
lse_ptrs = Lse + off_hb * seqlen_q_rounded + offs_m
tl.store(lse_ptrs, lse_i)
# initialize pointers to output
offs_n = tl.arange(0, BLOCK_HEADDIM)
out_ptrs = Out + off_b * stride_ob + off_h * stride_oh + (
offs_m[:, None] * stride_om + offs_n[None, :])
if EVEN_M:
if EVEN_HEADDIM:
tl.store(out_ptrs, acc_o)
else:
tl.store(out_ptrs, acc_o, mask=offs_d[None, :] < headdim)
else:
if EVEN_HEADDIM:
tl.store(out_ptrs, acc_o, mask=offs_m[:, None] < seqlen_q)
else:
tl.store(out_ptrs,
acc_o,
mask=(offs_m[:, None] < seqlen_q) &
(offs_d[None, :] < headdim))
@triton.jit
def _bwd_preprocess_do_o_dot(
Out,
DO,
Delta,
stride_ob,
stride_oh,
stride_om,
stride_dob,
stride_doh,
stride_dom,
nheads,
seqlen_q,
seqlen_q_rounded,
headdim,
BLOCK_M: tl.constexpr,
BLOCK_HEADDIM: tl.constexpr,
):
start_m = tl.program_id(0)
off_hb = tl.program_id(1)
off_b = off_hb // nheads
off_h = off_hb % nheads
# initialize offsets
offs_m = start_m * BLOCK_M + tl.arange(0, BLOCK_M)
offs_d = tl.arange(0, BLOCK_HEADDIM)
# load
o = tl.load(Out + off_b * stride_ob + off_h * stride_oh +
offs_m[:, None] * stride_om + offs_d[None, :],
mask=(offs_m[:, None] < seqlen_q) & (offs_d[None, :] < headdim),
other=0.0).to(tl.float32)
do = tl.load(DO + off_b * stride_dob + off_h * stride_doh +
offs_m[:, None] * stride_dom + offs_d[None, :],
mask=(offs_m[:, None] < seqlen_q) &
(offs_d[None, :] < headdim),
other=0.0).to(tl.float32)
delta = tl.sum(o * do, axis=1)
# write-back
tl.store(Delta + off_hb * seqlen_q_rounded + offs_m, delta)
@triton.jit
def _bwd_kernel_one_col_block(
start_n,
Q,
K,
V,
Bias,
DO,
DQ,
DK,
DV,
LSE,
D,
softmax_scale,
stride_qm,
stride_kn,
stride_vn,
stride_bm,
stride_dom,
stride_dqm,
stride_dkn,
stride_dvn,
seqlen_q,
seqlen_k,
headdim,
ATOMIC_ADD: tl.constexpr,
BIAS_TYPE: tl.constexpr,
IS_CAUSAL: tl.constexpr,
BLOCK_HEADDIM: tl.constexpr,
EVEN_M: tl.constexpr,
EVEN_N: tl.constexpr,
EVEN_HEADDIM: tl.constexpr,
BLOCK_M: tl.constexpr,
BLOCK_N: tl.constexpr,
):
# We need to make sure begin_m is a multiple of BLOCK_M (not BLOCK_N)
begin_m = 0 if not IS_CAUSAL else ((start_n * BLOCK_N) // BLOCK_M) * BLOCK_M
# initialize row/col offsets
offs_qm = begin_m + tl.arange(0, BLOCK_M)
offs_n = start_n * BLOCK_N + tl.arange(0, BLOCK_N)
offs_m = tl.arange(0, BLOCK_M)
offs_d = tl.arange(0, BLOCK_HEADDIM)
# initialize pointers to value-like data
q_ptrs = Q + (offs_qm[:, None] * stride_qm + offs_d[None, :])
k_ptrs = K + (offs_n[:, None] * stride_kn + offs_d[None, :])
v_ptrs = V + (offs_n[:, None] * stride_vn + offs_d[None, :])
do_ptrs = DO + (offs_qm[:, None] * stride_dom + offs_d[None, :])
dq_ptrs = DQ + (offs_qm[:, None] * stride_dqm + offs_d[None, :])
if BIAS_TYPE == 'vector':
b_ptrs = Bias + offs_n
elif BIAS_TYPE == 'matrix':
b_ptrs = Bias + (offs_qm[:, None] * stride_bm + offs_n[None, :])
else:
raise ValueError("BIAS_TYPE must be one of {'vector', 'matrix'}")
# initialize dv and dk
dv = tl.zeros([BLOCK_N, BLOCK_HEADDIM], dtype=tl.float32)
dk = tl.zeros([BLOCK_N, BLOCK_HEADDIM], dtype=tl.float32)
# k and v stay in SRAM throughout
# [2022-10-30] TD: Same bug as the fwd. In the case of EVEN_N=True and EVEN_M=False,
# if we just call tl.load(k_ptrs), we get the wrong output!
if EVEN_N & EVEN_M:
if EVEN_HEADDIM:
k = tl.load(k_ptrs)
v = tl.load(v_ptrs)
else:
k = tl.load(k_ptrs, mask=offs_d[None, :] < headdim, other=0.0)
v = tl.load(v_ptrs, mask=offs_d[None, :] < headdim, other=0.0)
else:
if EVEN_HEADDIM:
k = tl.load(k_ptrs, mask=offs_n[:, None] < seqlen_k, other=0.0)
v = tl.load(v_ptrs, mask=offs_n[:, None] < seqlen_k, other=0.0)
else:
k = tl.load(k_ptrs,
mask=(offs_n[:, None] < seqlen_k) &
(offs_d[None, :] < headdim),
other=0.0)
v = tl.load(v_ptrs,
mask=(offs_n[:, None] < seqlen_k) &
(offs_d[None, :] < headdim),
other=0.0)
# loop over rows
num_block_m = tl.cdiv(seqlen_q, BLOCK_M)
for start_m in range(begin_m, num_block_m * BLOCK_M, BLOCK_M):
start_m = tl.multiple_of(start_m, BLOCK_M)
offs_m_curr = start_m + offs_m
# load q, k, v, do on-chip
# Same bug as below. Otherwise gives wrong result for headdim=40, seqlen=(128, 117)
if EVEN_M & EVEN_HEADDIM:
q = tl.load(q_ptrs)
else:
if EVEN_HEADDIM:
q = tl.load(q_ptrs,
mask=offs_m_curr[:, None] < seqlen_q,
other=0.0)
else:
q = tl.load(q_ptrs,
mask=(offs_m_curr[:, None] < seqlen_q) &
(offs_d[None, :] < headdim),
other=0.0)
# recompute p = softmax(qk, dim=-1).T
qk = tl.dot(q, k, trans_b=True)
# Trying to combine the two masks seem to make the result wrong
if not EVEN_N: # Need to mask out otherwise the softmax is wrong
qk = tl.where(offs_n[None, :] < seqlen_k, qk, float('-inf'))
if IS_CAUSAL:
qk = tl.where(offs_m_curr[:, None] >= (offs_n[None, :]), qk,
float('-inf'))
if BIAS_TYPE != 'none':
if BIAS_TYPE == 'vector':
if EVEN_N:
bias = tl.load(b_ptrs).to(tl.float32)
else:
bias = tl.load(b_ptrs, mask=offs_n < seqlen_k,
other=0.0).to(tl.float32)
bias = bias[None, :]
elif BIAS_TYPE == 'matrix':
if EVEN_M & EVEN_N:
bias = tl.load(b_ptrs).to(tl.float32)
else:
bias = tl.load(b_ptrs,
mask=(offs_m_curr[:, None] < seqlen_q) &
(offs_n[None, :] < seqlen_k),
other=0.0).to(tl.float32)
else:
raise ValueError(
"BIAS_TYPE must be one of {'vector', 'matrix'}")
qk = qk * softmax_scale + bias
# There seems to be a race condition when headdim=48/96, and dq, dk, dv are wrong.
# Also wrong for headdim=64.
if not (EVEN_M & EVEN_HEADDIM):
tl.debug_barrier()
lse_i = tl.load(LSE + offs_m_curr)
if BIAS_TYPE == 'none':
p = tl.exp(qk * softmax_scale - lse_i[:, None])
else:
p = tl.exp(qk - lse_i[:, None])
# compute dv
# [2022-10-30] TD: A Triton bug: if EVEN_M=True and EVEN_HEADDIM=False, if we call
# do = tl.load(do_ptrs, mask=offs_d[None, :] < headdim, other=0.0), we get wrong outputs
# in the case of headdim=48/96, seqlen_q & seqlen_k >= 512. If headdim=40 or seqlen < 512,
# the output is correct.
if EVEN_M & EVEN_HEADDIM:
do = tl.load(do_ptrs)
else:
# [2022-11-01] TD: Triton bug, there's a race condition if we just use m_mask and not d_mask.
do = tl.load(do_ptrs,
mask=(offs_m_curr[:, None] < seqlen_q) &
(offs_d[None, :] < headdim),
other=0.0)
# if EVEN_M:
# if EVEN_HEADDIM:
# do = tl.load(do_ptrs)
# else:
# do = tl.load(do_ptrs, mask=offs_d[None, :] < headdim, other=0.0)
# else:
# if EVEN_HEADDIM:
# do = tl.load(do_ptrs, mask=offs_m_curr[:, None] < seqlen_q, other=0.0)
# else:
# do = tl.load(do_ptrs, mask=(offs_m_curr[:, None] < seqlen_q)
# & (offs_d[None, :] < headdim), other=0.0)
dv += tl.dot(p.to(do.dtype), do, trans_a=True)
# compute dp = dot(v, do)
# There seems to be a race condition when headdim=48/96, and dq, dk are wrong.
# Also wrong for headdim=128, seqlen=(108, 256), and ATOMIC_ADD=True
# Also wrong for headdim=64, seqlen=(1023, 1024), and ATOMIC_ADD=False
if not (EVEN_M & EVEN_HEADDIM):
tl.debug_barrier()
dp = tl.dot(do, v, trans_b=True)
# There's a race condition for headdim=48
if not EVEN_HEADDIM:
tl.debug_barrier()
# compute ds = p * (dp - delta[:, None])
# Putting the subtraction after the dp matmul (instead of before) is slightly faster
Di = tl.load(D + offs_m_curr)
# Converting ds to q.dtype here reduces register pressure and makes it much faster
# for BLOCK_HEADDIM=128
ds = (p * (dp - Di[:, None]) * softmax_scale).to(q.dtype)
# compute dk = dot(ds.T, q)
dk += tl.dot(ds, q, trans_a=True)
# compute dq
if not ATOMIC_ADD:
if EVEN_M & EVEN_HEADDIM: # Race condition if we just do EVEN_M
dq = tl.load(dq_ptrs, eviction_policy='evict_last')
dq += tl.dot(ds, k)
tl.store(dq_ptrs, dq, eviction_policy='evict_last')
else:
if EVEN_HEADDIM:
dq = tl.load(dq_ptrs,
mask=offs_m_curr[:, None] < seqlen_q,
other=0.0,
eviction_policy='evict_last')
dq += tl.dot(ds, k)
tl.store(dq_ptrs,
dq,
mask=offs_m_curr[:, None] < seqlen_q,
eviction_policy='evict_last')
else:
dq = tl.load(dq_ptrs,
mask=(offs_m_curr[:, None] < seqlen_q) &
(offs_d[None, :] < headdim),
other=0.0,
eviction_policy='evict_last')
dq += tl.dot(ds, k)
tl.store(dq_ptrs,
dq,
mask=(offs_m_curr[:, None] < seqlen_q) &
(offs_d[None, :] < headdim),
eviction_policy='evict_last')
else: # If we're parallelizing across the seqlen_k dimension
dq = tl.dot(ds, k)
if EVEN_M & EVEN_HEADDIM: # Race condition if we just do EVEN_M
tl.atomic_add(dq_ptrs, dq)
else:
if EVEN_HEADDIM:
tl.atomic_add(dq_ptrs,
dq,
mask=offs_m_curr[:, None] < seqlen_q)
else:
tl.atomic_add(dq_ptrs,
dq,
mask=(offs_m_curr[:, None] < seqlen_q) &
(offs_d[None, :] < headdim))
# increment pointers
dq_ptrs += BLOCK_M * stride_dqm
q_ptrs += BLOCK_M * stride_qm
do_ptrs += BLOCK_M * stride_dom
if BIAS_TYPE == 'matrix':
b_ptrs += BLOCK_M * stride_bm
# write-back
dv_ptrs = DV + (offs_n[:, None] * stride_dvn + offs_d[None, :])
dk_ptrs = DK + (offs_n[:, None] * stride_dkn + offs_d[None, :])
# [2022-11-01] TD: Same bug. In the case of EVEN_N=True and EVEN_M=False,
# if we just call tl.store(dv_ptrs), there's a race condition
if EVEN_N & EVEN_M:
if EVEN_HEADDIM:
tl.store(dv_ptrs, dv)
tl.store(dk_ptrs, dk)
else:
tl.store(dv_ptrs, dv, mask=offs_d[None, :] < headdim)
tl.store(dk_ptrs, dk, mask=offs_d[None, :] < headdim)
else:
if EVEN_HEADDIM:
tl.store(dv_ptrs, dv, mask=offs_n[:, None] < seqlen_k)
tl.store(dk_ptrs, dk, mask=offs_n[:, None] < seqlen_k)
else:
tl.store(dv_ptrs,
dv,
mask=(offs_n[:, None] < seqlen_k) &
(offs_d[None, :] < headdim))
tl.store(dk_ptrs,
dk,
mask=(offs_n[:, None] < seqlen_k) &
(offs_d[None, :] < headdim))
def init_to_zero(name):
return lambda nargs: nargs[name].zero_()
@triton.autotune(
configs=[
triton.Config(
{
'BLOCK_M': 128,
'BLOCK_N': 128,
'SEQUENCE_PARALLEL': False
},
num_warps=8,
num_stages=1,
pre_hook=init_to_zero('DQ')),
triton.Config(
{
'BLOCK_M': 128,
'BLOCK_N': 128,
'SEQUENCE_PARALLEL': True
},
num_warps=8,
num_stages=1,
pre_hook=init_to_zero('DQ')),
# Other configs seem to give wrong results when seqlen_q % 128 != 0, disabling them for now
# # Kernel is buggy (give wrong result) if we set BLOCK_m=128, BLOCK_n=64, num_warps=*4*
# triton.Config({"BLOCK_M": 128, "BLOCK_N": 64, "SEQUENCE_PARALLEL": False}, num_warps=8, num_stages=1, pre_hook=init_to_zero('DQ')),
# triton.Config({"BLOCK_M": 128, "BLOCK_N": 64, "SEQUENCE_PARALLEL": True}, num_warps=8, num_stages=1, pre_hook=init_to_zero('DQ')),
# triton.Config({"BLOCK_M": 64, "BLOCK_N": 64, "SEQUENCE_PARALLEL": False}, num_warps=4, num_stages=1, pre_hook=init_to_zero('DQ')),
# triton.Config({"BLOCK_M": 64, "BLOCK_N": 64, "SEQUENCE_PARALLEL": True}, num_warps=4, num_stages=1, pre_hook=init_to_zero('DQ')),
],
key=[
'CACHE_KEY_SEQLEN_Q', 'CACHE_KEY_SEQLEN_K', 'BIAS_TYPE', 'IS_CAUSAL',
'BLOCK_HEADDIM'
],
)
@triton.heuristics({
'EVEN_M': lambda args: args['seqlen_q'] % args['BLOCK_M'] == 0,
'EVEN_N': lambda args: args['seqlen_k'] % args['BLOCK_N'] == 0,
'EVEN_HEADDIM': lambda args: args['headdim'] == args['BLOCK_HEADDIM'],
})
@triton.jit
def _bwd_kernel(
Q,
K,
V,
Bias,
DO,
DQ,
DK,
DV,
LSE,
D,
softmax_scale,
stride_qb,
stride_qh,
stride_qm,
stride_kb,
stride_kh,
stride_kn,
stride_vb,
stride_vh,
stride_vn,
stride_bb,
stride_bh,
stride_bm,
stride_dob,
stride_doh,
stride_dom,
stride_dqb,
stride_dqh,
stride_dqm,
stride_dkb,
stride_dkh,
stride_dkn,
stride_dvb,
stride_dvh,
stride_dvn,
nheads,
seqlen_q,
seqlen_k,
seqlen_q_rounded,
headdim,
CACHE_KEY_SEQLEN_Q,
CACHE_KEY_SEQLEN_K,
BIAS_TYPE: tl.constexpr,
IS_CAUSAL: tl.constexpr,
BLOCK_HEADDIM: tl.constexpr,
SEQUENCE_PARALLEL: tl.constexpr,
EVEN_M: tl.constexpr,
EVEN_N: tl.constexpr,
EVEN_HEADDIM: tl.constexpr,
BLOCK_M: tl.constexpr,
BLOCK_N: tl.constexpr,
):
off_hb = tl.program_id(1)
off_b = off_hb // nheads
off_h = off_hb % nheads
# offset pointers for batch/head
Q += off_b * stride_qb + off_h * stride_qh
K += off_b * stride_kb + off_h * stride_kh
V += off_b * stride_vb + off_h * stride_vh
DO += off_b * stride_dob + off_h * stride_doh
DQ += off_b * stride_dqb + off_h * stride_dqh
DK += off_b * stride_dkb + off_h * stride_dkh
DV += off_b * stride_dvb + off_h * stride_dvh
if BIAS_TYPE != 'none':
Bias += off_b * stride_bb + off_h * stride_bh
# pointer to row-wise quantities in value-like data
D += off_hb * seqlen_q_rounded
LSE += off_hb * seqlen_q_rounded
if not SEQUENCE_PARALLEL:
num_block_n = tl.cdiv(seqlen_k, BLOCK_N)
for start_n in range(0, num_block_n):
_bwd_kernel_one_col_block(start_n,
Q,
K,
V,
Bias,
DO,
DQ,
DK,
DV,
LSE,
D,
softmax_scale,
stride_qm,
stride_kn,
stride_vn,
stride_bm,
stride_dom,
stride_dqm,
stride_dkn,
stride_dvn,
seqlen_q,
seqlen_k,
headdim,
ATOMIC_ADD=False,
BIAS_TYPE=BIAS_TYPE,
IS_CAUSAL=IS_CAUSAL,
BLOCK_HEADDIM=BLOCK_HEADDIM,
EVEN_M=EVEN_M,
EVEN_N=EVEN_N,
EVEN_HEADDIM=EVEN_HEADDIM,
BLOCK_M=BLOCK_M,
BLOCK_N=BLOCK_N)
else:
start_n = tl.program_id(0)
_bwd_kernel_one_col_block(start_n,
Q,
K,
V,
Bias,
DO,
DQ,
DK,
DV,
LSE,
D,
softmax_scale,
stride_qm,
stride_kn,
stride_vn,
stride_bm,
stride_dom,
stride_dqm,
stride_dkn,
stride_dvn,
seqlen_q,
seqlen_k,
headdim,
ATOMIC_ADD=True,
BIAS_TYPE=BIAS_TYPE,
IS_CAUSAL=IS_CAUSAL,
BLOCK_HEADDIM=BLOCK_HEADDIM,
EVEN_M=EVEN_M,
EVEN_N=EVEN_N,
EVEN_HEADDIM=EVEN_HEADDIM,
BLOCK_M=BLOCK_M,
BLOCK_N=BLOCK_N)
def _flash_attn_forward(q, k, v, bias=None, causal=False, softmax_scale=None):
# shape constraints
batch, seqlen_q, nheads, d = q.shape
_, seqlen_k, _, _ = k.shape
assert k.shape == (batch, seqlen_k, nheads, d)
assert v.shape == (batch, seqlen_k, nheads, d)
assert d <= 128, 'FlashAttention only support head dimensions up to 128'
assert q.dtype == k.dtype == v.dtype, 'All tensors must have the same type'
assert q.dtype in [torch.float16,
torch.bfloat16], 'Only support fp16 and bf16'
assert q.is_cuda and k.is_cuda and v.is_cuda
softmax_scale = softmax_scale or 1.0 / math.sqrt(d)
has_bias = bias is not None
bias_type = 'none'
if has_bias:
assert bias.dtype in [q.dtype, torch.float]
assert bias.is_cuda
assert bias.dim() == 4
if bias.stride(-1) != 1:
bias = bias.contiguous()
if bias.shape[2:] == (1, seqlen_k):
bias_type = 'vector'
elif bias.shape[2:] == (seqlen_q, seqlen_k):
bias_type = 'matrix'
else:
raise RuntimeError('Last 2 dimensions of bias must be (1, seqlen_k)'
' or (seqlen_q, seqlen_k)')
if bias.shape[:2] == (1, nheads):
bias = repeat(bias, '1 h ... -> b h ...', b=batch)
elif bias.shape[:2] == (batch, 1):
bias = repeat(bias, 'b 1 ... -> b h ...', h=nheads)
elif bias.shape[:2] == (1, 1):
bias = repeat(bias, '1 h ... -> b h ...', b=batch)
bias = repeat(bias, 'b 1 ... -> b h ...', h=nheads)
assert bias.shape[:2] == (
batch, nheads
), f'First 2 dimensions of bias must be broadcastible to (batch, nheads) = ({batch, nheads}). Bias has shape: {bias.shape}'
assert bias is not None # for type checking
bias_strides = (bias.stride(0), bias.stride(1),
bias.stride(2)) if has_bias else (0, 0, 0)
seqlen_q_rounded = math.ceil(seqlen_q / 128) * 128
lse = torch.empty((batch, nheads, seqlen_q_rounded),
device=q.device,
dtype=torch.float32)
tmp = torch.empty((batch, nheads, seqlen_q_rounded),
device=q.device,
dtype=torch.float32)
o = torch.empty_like(q)
BLOCK_HEADDIM = max(triton.next_power_of_2(d), 16)
# BLOCK = 128
# num_warps = 4 if d <= 64 else 8
grid = lambda META: (triton.cdiv(seqlen_q, META['BLOCK_M']), batch * nheads)
_fwd_kernel[grid]( # type: ignore
q,
k,
v,
bias,
o,
lse,
tmp,
softmax_scale,
q.stride(0),
q.stride(2),
q.stride(1),
k.stride(0),
k.stride(2),
k.stride(1),
v.stride(0),
v.stride(2),
v.stride(1),
*bias_strides,
o.stride(0),
o.stride(2),
o.stride(1),
nheads,
seqlen_q,
seqlen_k,
seqlen_q_rounded,
d,
seqlen_q // 32,
seqlen_k // 32, # key for triton cache (limit number of compilations)
# Can't use kwargs here because triton autotune expects key to be args, not kwargs
# IS_CAUSAL=causal, BLOCK_HEADDIM=d,
bias_type,
causal,
BLOCK_HEADDIM,
# BLOCK_M=BLOCK, BLOCK_N=BLOCK,
# num_warps=num_warps,
# num_stages=1,
)
return o, lse, softmax_scale # softmax_scale could have been updated
def _flash_attn_backward(do,
q,
k,
v,
o,
lse,
dq,
dk,
dv,
bias=None,
causal=False,
softmax_scale=None):
# Make sure that the last dimension is contiguous
if do.stride(-1) != 1:
do = do.contiguous()
batch, seqlen_q, nheads, d = q.shape
_, seqlen_k, _, _ = k.shape
# assert d in {16, 32, 64, 128}
assert d <= 128
seqlen_q_rounded = math.ceil(seqlen_q / 128) * 128
assert lse.shape == (batch, nheads, seqlen_q_rounded)
assert q.stride(-1) == k.stride(-1) == v.stride(-1) == o.stride(-1) == 1
assert dq.stride(-1) == dk.stride(-1) == dv.stride(-1) == 1
softmax_scale = softmax_scale or 1.0 / math.sqrt(d)
# dq_accum = torch.zeros_like(q, dtype=torch.float32)
dq_accum = torch.empty_like(q, dtype=torch.float32)
delta = torch.empty_like(lse)
# delta = torch.zeros_like(lse)
BLOCK_HEADDIM = max(triton.next_power_of_2(d), 16)
grid = lambda META: (triton.cdiv(seqlen_q, META['BLOCK_M']), batch * nheads)
_bwd_preprocess_do_o_dot[grid]( # type: ignore
o,
do,
delta,
o.stride(0),
o.stride(2),
o.stride(1),
do.stride(0),
do.stride(2),
do.stride(1),
nheads,
seqlen_q,
seqlen_q_rounded,
d,
BLOCK_M=128,
BLOCK_HEADDIM=BLOCK_HEADDIM,
)
has_bias = bias is not None
bias_type = 'none'
if has_bias:
assert bias.dtype in [q.dtype, torch.float]
assert bias.is_cuda
assert bias.dim() == 4
assert bias.stride(-1) == 1
if bias.shape[2:] == (1, seqlen_k):
bias_type = 'vector'
elif bias.shape[2:] == (seqlen_q, seqlen_k):
bias_type = 'matrix'
else:
raise RuntimeError('Last 2 dimensions of bias must be (1, seqlen_k)'
' or (seqlen_q, seqlen_k)')
if bias.shape[:2] == (1, nheads):
bias = repeat(bias, '1 h ... -> b h ...', b=batch)
elif bias.shape[:2] == (batch, 1):
bias = repeat(bias, 'b 1 ... -> b h ...', h=nheads)
elif bias.shape[:2] == (1, 1):
bias = repeat(bias, '1 h ... -> b h ...', b=batch)
bias = repeat(bias, 'b 1 ... -> b h ...', h=nheads)
assert bias.shape[:2] == (
batch, nheads
), f'First 2 dimensions of bias must be broadcastible to (batch, nheads) = ({batch, nheads}). Bias has shape: {bias.shape}'
assert bias is not None # type checking
bias_strides = (bias.stride(0), bias.stride(1),
bias.stride(2)) if has_bias else (0, 0, 0)
# BLOCK_M = 128
# BLOCK_N = 64
# num_warps = 4
grid = lambda META: (triton.cdiv(seqlen_k, META['BLOCK_N'])
if META['SEQUENCE_PARALLEL'] else 1, batch * nheads)
_bwd_kernel[grid]( # type: ignore
q,
k,
v,
bias,
do,
dq_accum,
dk,
dv,
lse,
delta,
softmax_scale,
q.stride(0),
q.stride(2),
q.stride(1),
k.stride(0),
k.stride(2),
k.stride(1),
v.stride(0),
v.stride(2),
v.stride(1),
*bias_strides,
do.stride(0),
do.stride(2),
do.stride(1),
dq_accum.stride(0),
dq_accum.stride(2),
dq_accum.stride(1),
dk.stride(0),
dk.stride(2),
dk.stride(1),
dv.stride(0),
dv.stride(2),
dv.stride(1),
nheads,
seqlen_q,
seqlen_k,
seqlen_q_rounded,
d,
seqlen_q // 32,
seqlen_k // 32, # key for triton cache (limit number of compilations)
# Can't use kwargs here because triton autotune expects key to be args, not kwargs
# IS_CAUSAL=causal, BLOCK_HEADDIM=d,
bias_type,
causal,
BLOCK_HEADDIM,
# SEQUENCE_PARALLEL=False,
# BLOCK_M=BLOCK_M, BLOCK_N=BLOCK_N,
# num_warps=num_warps,
# num_stages=1,
)
dq.copy_(dq_accum)
class _FlashAttnQKVPackedFunc(torch.autograd.Function):
@staticmethod
def forward(ctx, qkv, bias=None, causal=False, softmax_scale=None):
"""Forward pass for packed FlashAttention.
Args:
ctx: autograd context
qkv: (batch, seqlen, 3, nheads, headdim)
bias: optional, shape broadcastible to (batch, nheads, seqlen, seqlen).
For example, ALiBi mask for causal would have shape (1, nheads, 1, seqlen).
ALiBi mask for non-causal would have shape (1, nheads, seqlen, seqlen)
causal (bool): whether to incorporate causal attention masking
softmax_scale (float, optional): scale factor for softmax
"""
# Make sure that the last dimension is contiguous
if qkv.stride(-1) != 1:
qkv = qkv.contiguous()
o, lse, ctx.softmax_scale = _flash_attn_forward(
qkv[:, :, 0],
qkv[:, :, 1],
qkv[:, :, 2],
bias=bias,
causal=causal,
softmax_scale=softmax_scale)
ctx.save_for_backward(qkv, o, lse, bias)
ctx.causal = causal
return o
@staticmethod
def backward(ctx, do):
qkv, o, lse, bias = ctx.saved_tensors
assert not ctx.needs_input_grad[
1], 'FlashAttention does not support bias gradient yet'
# Triton's autotune causes the Tensor._version to change, and so Pytorch autograd
# does a memcpy. To avoid this we run in inference_mode, which doesn't track the version.
with torch.inference_mode():
dqkv = torch.empty_like(qkv)
_flash_attn_backward(do,
qkv[:, :, 0],
qkv[:, :, 1],
qkv[:, :, 2],
o,
lse,
dqkv[:, :, 0],
dqkv[:, :, 1],
dqkv[:, :, 2],
bias=bias,
causal=ctx.causal,
softmax_scale=ctx.softmax_scale)
return dqkv, None, None, None
flash_attn_qkvpacked_func = _FlashAttnQKVPackedFunc.apply
class _FlashAttnFunc(torch.autograd.Function):
@staticmethod
def forward(ctx, q, k, v, bias=None, causal=False, softmax_scale=None):
"""Forward pass for FlashAttention.
Args:
ctx: autograd context
q: (batch_size, seqlen_q, nheads, headdim)
k: (batch_size, seqlen_k, nheads, headdim)
v: (batch_size, seqlen_k, nheads, headdim)
bias: optional, shape broadcastible to (batch, nheads, seqlen_q, seqlen_k).
For example, ALiBi mask for causal would have shape (1, nheads, 1, seqlen_k).
ALiBi mask for non-causal would have shape (1, nheads, seqlen_q, seqlen_k)
causal (bool): whether to incorporate causal attention masking
softmax_scale (float, optional): scale factor for softmax
"""
# Make sure that the last dimension is contiguous
q, k, v = [
x if x.stride(-1) == 1 else x.contiguous() for x in [q, k, v]
]
o, lse, ctx.softmax_scale = _flash_attn_forward(
q, k, v, bias=bias, causal=causal, softmax_scale=softmax_scale)
ctx.save_for_backward(q, k, v, o, lse, bias)
ctx.causal = causal
return o
@staticmethod
def backward(ctx, do):
q, k, v, o, lse, bias = ctx.saved_tensors
assert not ctx.needs_input_grad[
3], 'FlashAttention does not support bias gradient yet'
# Triton's autotune causes the Tensor._version to change, and so Pytorch autograd
# does a memcpy. To avoid this we run in inference_mode, which doesn't track the version.
with torch.inference_mode():
dq = torch.empty_like(q)
dk = torch.empty_like(k)
dv = torch.empty_like(v)
_flash_attn_backward(do,
q,
k,
v,
o,
lse,
dq,
dk,
dv,
bias=bias,
causal=ctx.causal,
softmax_scale=ctx.softmax_scale)
return dq, dk, dv, None, None, None
flash_attn_func = _FlashAttnFunc.apply