Amelie Schreiber

AmelieSchreiber

AI & ML interests

Diffusion and flow matching models for proteins, small molecules, DNA, and RNA, protein language models, machine translation, equivariant attention mechanisms, LoRA, and QLoRA.

Recent Activity

liked a model 8 days ago

tattabio/gLM2_650M

liked a model 8 days ago

tattabio/gLM2_150M

upvoted a collection about 1 month ago

Cephalo

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Articles

A New Era in Multistep Enzyme Design

Oct 16

• 3

A Guide to Designing New Functional Proteins and Improving Protein Function, Stability, and Diversity with Generative AI

Jul 2

• 40

RFDiffusion Potentials

May 14

• 15

Predicting the Effects of Mutations on Protein Function with ESM-2

Dec 13, 2023

• 8

Faster Persistent Homology Alignment and Protein Complex Clustering with ESM-2 and Persistence Landscapes

Nov 30, 2023

• 1

Clustering Protein Complexes using Persistent Homology and Finetuning ESM-2 for PPI Network Prediction

Nov 29, 2023

• 1

ESM-2 for Generating and Optimizing Peptide Binders for Target Proteins

Nov 23, 2023

• 3

Persistent Homology Alignment (PHA): Replacing Multiple Sequence Alignments using ESM-2 and Persistent Homology

Nov 15, 2023

Predicting Protein-Protein Interactions Using a Protein Language Model and Linear Sum Assignment

Oct 15, 2023

• 8

ESMBind (ESMB) Ensemble Models

Sep 22, 2023

• 4

ESMBind (ESMB): Low Rank Adaptation of ESM-2 for Protein Binding Site Prediction

Sep 15, 2023

• 14

Organizations

AmelieSchreiber's activity