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license: cc-by-nc-sa-4.0 |
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--- |
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# Model Card for hest-tissue-seg |
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DeepLabV3 model finetuned on HEST-1k and Acrobat for IHC/H&E tissue segmentation. |
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Please visit the [HEST-library](https://github.com/mahmoodlab/hest) for instructions. |
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### How to cite: |
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``` |
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@article{jaume2024hest, |
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author = {Jaume, Guillaume and Doucet, Paul and Song, Andrew H. and Lu, Ming Y. and Almagro-Perez, Cristina and Wagner, Sophia J. and Vaidya, Anurag J. and Chen, Richard J. and Williamson, Drew F. K. and Kim, Ahrong and Mahmood, Faisal}, |
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title = {{HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis}}, |
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journal = {arXiv}, |
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year = {2024}, |
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month = jun, |
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eprint = {2406.16192}, |
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url = {https://arxiv.org/abs/2406.16192v1} |
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} |
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``` |
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### Contact: |
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- <b>Guillaume Jaume</b> Harvard Medical School, Boston, Mahmood Lab (`gjaume@bwh.harvard.edu`) |
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- <b>Paul Doucet</b> Harvard Medical School, Boston, Mahmood Lab (`pdoucet@bwh.harvard.edu`) |
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<i>The dataset is distributed under the Attribution-NonCommercial-ShareAlike 4.0 International license (CC BY-NC-SA 4.0 Deed)</i> |
