Datasets:

Nadav-Timor

/

PyPiBugs

like 0

https://:@github.com/chanedwin/pydistinct.git

2920f6fe09daa3362513fbc516c711035bcb8c6a

@@ -109,7 +109,7 @@ def _get_confidence_interval(bootstrap_dist, stat_val, alpha, is_pivotal): low = _np.percentile(bootstrap_dist, 100 * ((alpha / 2))) val = _np.percentile(bootstrap_dist, 50) high = _np.percentile(bootstrap_dist, 100 * (1 - (alpha / 2))) - return BootstrapResults(low, stat_val, high) + return BootstrapResults(low, val, high) def _needs_sparse_unification(values_lists):

pydistinct/bootstrap.py

ReplaceText(target='val' @(112,33)->(112,41))

def _get_confidence_interval(bootstrap_dist, stat_val, alpha, is_pivotal): low = _np.percentile(bootstrap_dist, 100 * ((alpha / 2))) val = _np.percentile(bootstrap_dist, 50) high = _np.percentile(bootstrap_dist, 100 * (1 - (alpha / 2))) return BootstrapResults(low, stat_val, high) def _needs_sparse_unification(values_lists):

def _get_confidence_interval(bootstrap_dist, stat_val, alpha, is_pivotal): low = _np.percentile(bootstrap_dist, 100 * ((alpha / 2))) val = _np.percentile(bootstrap_dist, 50) high = _np.percentile(bootstrap_dist, 100 * (1 - (alpha / 2))) return BootstrapResults(low, val, high) def _needs_sparse_unification(values_lists):

https://:@github.com/coreofscience/python-wostools.git

2163905ba13f68da61ed6b7a4da0c2f524399039

@@ -47,7 +47,7 @@ class Article: self.year: Optional[int] = year self.journal: Optional[str] = journal self.volume: Optional[str] = volume - self.issue: Optional[str] = volume + self.issue: Optional[str] = issue self.page: Optional[str] = page self.doi: Optional[str] = doi self.references: List[str] = references or []

wostools/article.py

ReplaceText(target='issue' @(50,36)->(50,42))

class Article: self.year: Optional[int] = year self.journal: Optional[str] = journal self.volume: Optional[str] = volume self.issue: Optional[str] = volume self.page: Optional[str] = page self.doi: Optional[str] = doi self.references: List[str] = references or []

class Article: self.year: Optional[int] = year self.journal: Optional[str] = journal self.volume: Optional[str] = volume self.issue: Optional[str] = issue self.page: Optional[str] = page self.doi: Optional[str] = doi self.references: List[str] = references or []

https://:@github.com/snipsco/respeaker_python_library.git

0f5991317aa815356f8225f6088f85cd2f3bc27f

@@ -66,7 +66,7 @@ class WebRTCVAD: break elif len(self.history) == self.history.maxlen and sum(self.history) == 0: sys.stdout.write('Todo: increase capture volume') - for _ in range(self.history.maxlen / 2): + for _ in range(self.history.maxlen // 2): self.history.popleft() else:

respeaker/vad.py

ReplaceText(target='//' @(69,55)->(69,56))

class WebRTCVAD: break elif len(self.history) == self.history.maxlen and sum(self.history) == 0: sys.stdout.write('Todo: increase capture volume') for _ in range(self.history.maxlen / 2): self.history.popleft() else:

class WebRTCVAD: break elif len(self.history) == self.history.maxlen and sum(self.history) == 0: sys.stdout.write('Todo: increase capture volume') for _ in range(self.history.maxlen // 2): self.history.popleft() else:

https://:@github.com/luphord/longstaff_schwartz.git

a70ee9438f4a36cfc25498c1091b5f8fc6879151

@@ -91,7 +91,7 @@ def american_put_exercise_barrier(mdl, strike): exercises = [] payoff = put_payoff(strike) for cnt, s, ex, opt in mdl.evaluate_american_exercisable_iter(payoff): - ex_idx = ex > cnt + ex_idx = ex >= cnt ex_spots = s[ex_idx] exercises.append(ex_spots.max() if ex_idx.any() else None) exercises.reverse()

longstaff_schwartz/binomial.py

ReplaceText(target='>=' @(94,20)->(94,21))

def american_put_exercise_barrier(mdl, strike): exercises = [] payoff = put_payoff(strike) for cnt, s, ex, opt in mdl.evaluate_american_exercisable_iter(payoff): ex_idx = ex > cnt ex_spots = s[ex_idx] exercises.append(ex_spots.max() if ex_idx.any() else None) exercises.reverse()

def american_put_exercise_barrier(mdl, strike): exercises = [] payoff = put_payoff(strike) for cnt, s, ex, opt in mdl.evaluate_american_exercisable_iter(payoff): ex_idx = ex >= cnt ex_spots = s[ex_idx] exercises.append(ex_spots.max() if ex_idx.any() else None) exercises.reverse()

https://:@github.com/ietf-tools/RfcEditor.git

9e509f9cbc2995ab8ad72636fe3a4739c23515bb

@@ -174,7 +174,7 @@ def check(el, depth=0): if ns is not None and ns not in wp.xmlns_urls: log.error("Element '{0}' does not allow attributes with namespace '{1}'". format(element, ns), where=el) - attribs_to_remove.append(attr) + attribs_to_remove.append(nsAttrib) continue # look to see if the attribute is either an attribute for a specific

svgcheck/svgcheck/checksvg.py

ReplaceText(target='nsAttrib' @(177,37)->(177,41))

def check(el, depth=0): if ns is not None and ns not in wp.xmlns_urls: log.error("Element '{0}' does not allow attributes with namespace '{1}'". format(element, ns), where=el) attribs_to_remove.append(attr) continue # look to see if the attribute is either an attribute for a specific

def check(el, depth=0): if ns is not None and ns not in wp.xmlns_urls: log.error("Element '{0}' does not allow attributes with namespace '{1}'". format(element, ns), where=el) attribs_to_remove.append(nsAttrib) continue # look to see if the attribute is either an attribute for a specific

https://:@github.com/ietf-tools/RfcEditor.git

2086136adaeb71096ae8075d0b540ed0391608ad

@@ -242,7 +242,7 @@ def main(): # Validate any embedded ABNF if not options.no_abnf: - checker = AbnfChecker(options) + checker = AbnfChecker(config) checker.validate(xmlrfc.tree)

rfclint/rfclint/run.py

ReplaceText(target='config' @(245,30)->(245,37))

def main(): # Validate any embedded ABNF if not options.no_abnf: checker = AbnfChecker(options) checker.validate(xmlrfc.tree)

def main(): # Validate any embedded ABNF if not options.no_abnf: checker = AbnfChecker(config) checker.validate(xmlrfc.tree)

https://:@github.com/openlegis-br/sagl.git

9ea9984b17df551e9b7600c3c9ba7eb6a4f914e3

@@ -53,7 +53,7 @@ for periodo in context.zsql.periodo_comp_comissao_obter_zsql(data = DateTime(),c destinatarios=[] for composicao_comissao in context.zsql.composicao_comissao_obter_zsql(cod_comissao=comissao.cod_comissao,cod_periodo_comp=periodo.cod_periodo_comp): - if composicao_comissao.dat_desligamento == None or composicao_comissao.dat_desligamento <= DateTime(): + if composicao_comissao.dat_desligamento == None or composicao_comissao.dat_desligamento >= DateTime(): for destinatario in context.zsql.autor_obter_zsql(cod_parlamentar=composicao_comissao.cod_parlamentar): dic={} dic['end_email'] = destinatario.end_email

branches/3.1_buildout/il/sapl/skins/pysc/envia_despacho_comissao_pysc.py

ReplaceText(target='>=' @(56,89)->(56,91))

for periodo in context.zsql.periodo_comp_comissao_obter_zsql(data = DateTime(),c destinatarios=[] for composicao_comissao in context.zsql.composicao_comissao_obter_zsql(cod_comissao=comissao.cod_comissao,cod_periodo_comp=periodo.cod_periodo_comp): if composicao_comissao.dat_desligamento == None or composicao_comissao.dat_desligamento <= DateTime(): for destinatario in context.zsql.autor_obter_zsql(cod_parlamentar=composicao_comissao.cod_parlamentar): dic={} dic['end_email'] = destinatario.end_email

for periodo in context.zsql.periodo_comp_comissao_obter_zsql(data = DateTime(),c destinatarios=[] for composicao_comissao in context.zsql.composicao_comissao_obter_zsql(cod_comissao=comissao.cod_comissao,cod_periodo_comp=periodo.cod_periodo_comp): if composicao_comissao.dat_desligamento == None or composicao_comissao.dat_desligamento >= DateTime(): for destinatario in context.zsql.autor_obter_zsql(cod_parlamentar=composicao_comissao.cod_parlamentar): dic={} dic['end_email'] = destinatario.end_email

https://:@github.com/Mellcap/MellPlayer.git

8f5bcc0ee48e58743f595df9f738a6c1c0c158a6

@@ -98,7 +98,7 @@ class Netease(object): 'song_name': d['name'], 'song_url': d['mp3Url'], 'song_artists': ';'.join(map(lambda a: a['name'], d['artists'])) - } for d in data] + } for d in tracks] elif parse_type == 'lyric_detail': if 'lrc' in data: res = {

MellPlayer/api.py

ReplaceText(target='tracks' @(101,23)->(101,27))

class Netease(object): 'song_name': d['name'], 'song_url': d['mp3Url'], 'song_artists': ';'.join(map(lambda a: a['name'], d['artists'])) } for d in data] elif parse_type == 'lyric_detail': if 'lrc' in data: res = {

class Netease(object): 'song_name': d['name'], 'song_url': d['mp3Url'], 'song_artists': ';'.join(map(lambda a: a['name'], d['artists'])) } for d in tracks] elif parse_type == 'lyric_detail': if 'lrc' in data: res = {

https://:@github.com/kobejohn/investigators.git

678d9eeee6cb90d3ad60bea640f8170ba9cc0473

@@ -64,7 +64,7 @@ class ImageIdentifier(object): scale = min(h_scale, w_scale) # min --> most shrinking scaled_h = int(round(scale * template_h)) scaled_w = int(round(scale * template_w)) - eq_template = cv2.resize(image, (scaled_w, scaled_h), + eq_template = cv2.resize(template, (scaled_w, scaled_h), interpolation=cv2.INTER_AREA) return eq_template, eq_image

investigators/visuals.py

ReplaceText(target='template' @(67,37)->(67,42))

class ImageIdentifier(object): scale = min(h_scale, w_scale) # min --> most shrinking scaled_h = int(round(scale * template_h)) scaled_w = int(round(scale * template_w)) eq_template = cv2.resize(image, (scaled_w, scaled_h), interpolation=cv2.INTER_AREA) return eq_template, eq_image

class ImageIdentifier(object): scale = min(h_scale, w_scale) # min --> most shrinking scaled_h = int(round(scale * template_h)) scaled_w = int(round(scale * template_w)) eq_template = cv2.resize(template, (scaled_w, scaled_h), interpolation=cv2.INTER_AREA) return eq_template, eq_image

https://:@github.com/swfiua/karmapi.git

10471bc3be40e81ed93d809a865e27e4fcf95b08

@@ -101,7 +101,7 @@ class WeatherHat(pig.Widget): self.interval = 1 # build a Grid and add to self - monitor = pig.Grid(meta, self) + monitor = pig.Grid(self, meta) self.monitor = monitor layout.addWidget(monitor)

karmapi/sense.py

ArgSwap(idxs=0<->1 @(104,18)->(104,26))

class WeatherHat(pig.Widget): self.interval = 1 # build a Grid and add to self monitor = pig.Grid(meta, self) self.monitor = monitor layout.addWidget(monitor)

class WeatherHat(pig.Widget): self.interval = 1 # build a Grid and add to self monitor = pig.Grid(self, meta) self.monitor = monitor layout.addWidget(monitor)

https://:@github.com/swfiua/karmapi.git

3b50b753a4309fb9eced9736c77b3bf9afea5227

@@ -95,7 +95,7 @@ def pick_pixels(image, size=8): width, height = len(image), len(image[0]) pwidth = int(width / size) - pheight = int(width / size) + pheight = int(height / size) pickx = random.randint(0, pwidth-1) picky = random.randint(0, pheight-1)

karmapi/backends/hatpig.py

ReplaceText(target='height' @(98,18)->(98,23))

def pick_pixels(image, size=8): width, height = len(image), len(image[0]) pwidth = int(width / size) pheight = int(width / size) pickx = random.randint(0, pwidth-1) picky = random.randint(0, pheight-1)

def pick_pixels(image, size=8): width, height = len(image), len(image[0]) pwidth = int(width / size) pheight = int(height / size) pickx = random.randint(0, pwidth-1) picky = random.randint(0, pheight-1)

https://:@github.com/swfiua/karmapi.git

b0380f746dc68f7fec78d6ab0e425b6259336ce8

@@ -792,7 +792,7 @@ class JeuxSansFrontieres: wteam = group.winner() setattr(kgame, label, wteam) if group.is_finished(): - wteam.games.append(game) + wteam.games.append(kgame) kgame, label = self.seconds[key] steam = group.second()

karmapi/wc.py

ReplaceText(target='kgame' @(795,35)->(795,39))

class JeuxSansFrontieres: wteam = group.winner() setattr(kgame, label, wteam) if group.is_finished(): wteam.games.append(game) kgame, label = self.seconds[key] steam = group.second()

class JeuxSansFrontieres: wteam = group.winner() setattr(kgame, label, wteam) if group.is_finished(): wteam.games.append(kgame) kgame, label = self.seconds[key] steam = group.second()

https://:@github.com/swfiua/karmapi.git

e6231e7cbc0d0b521c361bc5ac2fae3be0e8f194

@@ -154,7 +154,7 @@ class BeanStalk: def draw(self, canvas, width, height, colour): xx = self.xx * width - yy = self.yy * width + yy = self.yy * height canvas.create_text(

karmapi/beanstalk.py

ReplaceText(target='height' @(157,23)->(157,28))

class BeanStalk: def draw(self, canvas, width, height, colour): xx = self.xx * width yy = self.yy * width canvas.create_text(

class BeanStalk: def draw(self, canvas, width, height, colour): xx = self.xx * width yy = self.yy * height canvas.create_text(

https://:@github.com/swfiua/karmapi.git

16cae396fa2510bbebd47239d9ffb2eb5f70882d

@@ -216,7 +216,7 @@ class Sphere: for ix, (r, g, b) in enumerate(value): self.red[ix] = r self.green[ix] = g - self.blue[ix] = r + self.blue[ix] = b def quantise(self, value):

karmapi/cpr.py

ReplaceText(target='b' @(219,28)->(219,29))

class Sphere: for ix, (r, g, b) in enumerate(value): self.red[ix] = r self.green[ix] = g self.blue[ix] = r def quantise(self, value):

class Sphere: for ix, (r, g, b) in enumerate(value): self.red[ix] = r self.green[ix] = g self.blue[ix] = b def quantise(self, value):

https://:@github.com/yetone/baidu_tts.git

c9fb8ff550735a0dd776324b8cf10da53bf2fa25

@@ -32,7 +32,7 @@ class BaiduTTS(object): url = 'https://openapi.baidu.com/oauth/2.0/token' key = 'access_token' res = self.cache.get(key) - if res and res['expire_time'] < time.time(): + if res and res['expire_time'] > time.time(): return res['data'] resp = requests.get( url,

baidu_tts/__init__.py

ReplaceText(target='>' @(35,38)->(35,39))

class BaiduTTS(object): url = 'https://openapi.baidu.com/oauth/2.0/token' key = 'access_token' res = self.cache.get(key) if res and res['expire_time'] < time.time(): return res['data'] resp = requests.get( url,

class BaiduTTS(object): url = 'https://openapi.baidu.com/oauth/2.0/token' key = 'access_token' res = self.cache.get(key) if res and res['expire_time'] > time.time(): return res['data'] resp = requests.get( url,

https://:@github.com/Btibert3/pypeds.git

705d6a5d4636e573c20825eff40da5822c2e0d55

@@ -18,7 +18,7 @@ def zip_parser(url=None, survey=None): # path = "/tmp/pypeds/" + str(int(time.time())) + "/" # hacky way to make unique path to extract time _today = datetime.datetime.today().strftime('%Y%m%d') survey_lower = survey.lower() - path = "/tmp/" + str(_today) + str(survey) + "/" # hacky way to make unique path to extract date and survey + path = "/tmp/" + str(_today) + str(survey_lower) + "/" # hacky way to make unique path to extract date and survey file = survey + ".zip" # naive way to do cacheing - if the path for today exists, dont do anything, if it doesnt, get the data

pypeds/ipeds.py

ReplaceText(target='survey_lower' @(21,39)->(21,45))

def zip_parser(url=None, survey=None): # path = "/tmp/pypeds/" + str(int(time.time())) + "/" # hacky way to make unique path to extract time _today = datetime.datetime.today().strftime('%Y%m%d') survey_lower = survey.lower() path = "/tmp/" + str(_today) + str(survey) + "/" # hacky way to make unique path to extract date and survey file = survey + ".zip" # naive way to do cacheing - if the path for today exists, dont do anything, if it doesnt, get the data

def zip_parser(url=None, survey=None): # path = "/tmp/pypeds/" + str(int(time.time())) + "/" # hacky way to make unique path to extract time _today = datetime.datetime.today().strftime('%Y%m%d') survey_lower = survey.lower() path = "/tmp/" + str(_today) + str(survey_lower) + "/" # hacky way to make unique path to extract date and survey file = survey + ".zip" # naive way to do cacheing - if the path for today exists, dont do anything, if it doesnt, get the data

https://:@github.com/FabriceSalvaire/Pyterate.git

b23a194f0f7785ef190d0cec7171b65d4313d455

@@ -49,7 +49,7 @@ def setup_logging(application_name=APPLICATION_NAME, config_file=None): formatter_config = logging_config['formatters']['ansi']['format'] logging_config['formatters']['ansi']['format'] = formatter_config.replace('<ESC>', '\033') - if ConfigInstall.OS.on_windows and ConfigInstall.OS.on_osx: + if ConfigInstall.OS.on_windows or ConfigInstall.OS.on_osx: formatter = 'simple' else: formatter = 'ansi'

Pyterate/Logging/Logging.py

ReplaceText(target='or' @(52,35)->(52,38))

def setup_logging(application_name=APPLICATION_NAME, config_file=None): formatter_config = logging_config['formatters']['ansi']['format'] logging_config['formatters']['ansi']['format'] = formatter_config.replace('<ESC>', '\033') if ConfigInstall.OS.on_windows and ConfigInstall.OS.on_osx: formatter = 'simple' else: formatter = 'ansi'

def setup_logging(application_name=APPLICATION_NAME, config_file=None): formatter_config = logging_config['formatters']['ansi']['format'] logging_config['formatters']['ansi']['format'] = formatter_config.replace('<ESC>', '\033') if ConfigInstall.OS.on_windows or ConfigInstall.OS.on_osx: formatter = 'simple' else: formatter = 'ansi'

https://:@github.com/andrewsanchez/genbank-qc.git

1f822c8490c0187631a666e420704f28c4d653f7

@@ -64,7 +64,7 @@ class FilteredSpecies(Species): """ self.passed = self.stats[self.stats["N_Count"] <= self.max_n_count] self._criteria_dict["N_Count"]["failed"] = self.stats.index[ - self.stats["N_Count"] >= self.max_n_count] + self.stats["N_Count"] > self.max_n_count] # self.failed_N_Count = self.stats.index[self.stats["N_Count"] >= # self.max_n_count]

genbankfilter/filter.py

ReplaceText(target='>' @(67,34)->(67,36))

class FilteredSpecies(Species): """ self.passed = self.stats[self.stats["N_Count"] <= self.max_n_count] self._criteria_dict["N_Count"]["failed"] = self.stats.index[ self.stats["N_Count"] >= self.max_n_count] # self.failed_N_Count = self.stats.index[self.stats["N_Count"] >= # self.max_n_count]

class FilteredSpecies(Species): """ self.passed = self.stats[self.stats["N_Count"] <= self.max_n_count] self._criteria_dict["N_Count"]["failed"] = self.stats.index[ self.stats["N_Count"] > self.max_n_count] # self.failed_N_Count = self.stats.index[self.stats["N_Count"] >= # self.max_n_count]

https://:@github.com/andrewsanchez/genbank-qc.git

2aa87a49e09fefbbe7fe2cba2e6074bba157322b

@@ -38,7 +38,7 @@ def cli(filter_level, max_unknowns, c_deviations, s_deviations, m_deviations, print("Completed ", s.species) print(s) except Exception: - print('Failed ', species.species) + print('Failed ', s.species) traceback.print_exc() else: from genbankqc import Genbank

genbankqc/__main__.py

ReplaceText(target='s' @(41,29)->(41,36))

def cli(filter_level, max_unknowns, c_deviations, s_deviations, m_deviations, print("Completed ", s.species) print(s) except Exception: print('Failed ', species.species) traceback.print_exc() else: from genbankqc import Genbank

def cli(filter_level, max_unknowns, c_deviations, s_deviations, m_deviations, print("Completed ", s.species) print(s) except Exception: print('Failed ', s.species) traceback.print_exc() else: from genbankqc import Genbank

https://:@github.com/andrewsanchez/genbank-qc.git

807883f82e4ab00bb0231c80f221e9777bf7a6e3

@@ -22,7 +22,7 @@ def test_download_assembly_summary(): @pytest.fixture() def biosample(): temp = Path(tempfile.mkdtemp()) - biosample = metadata.BioSample("inbox.asanchez@gmail.com", temp, sample=100) + biosample = metadata.BioSample(temp, "inbox.asanchez@gmail.com", sample=100) yield biosample shutil.rmtree(temp)

test/metadata_test.py

ArgSwap(idxs=0<->1 @(25,16)->(25,34))

def test_download_assembly_summary(): @pytest.fixture() def biosample(): temp = Path(tempfile.mkdtemp()) biosample = metadata.BioSample("inbox.asanchez@gmail.com", temp, sample=100) yield biosample shutil.rmtree(temp)

def test_download_assembly_summary(): @pytest.fixture() def biosample(): temp = Path(tempfile.mkdtemp()) biosample = metadata.BioSample(temp, "inbox.asanchez@gmail.com", sample=100) yield biosample shutil.rmtree(temp)

https://:@github.com/atilaneves/ropemode.git

c37cfc181d56d5b8bb67bcb7501b8ac4eac6a747

@@ -579,7 +579,7 @@ class _CodeAssist(object): for assist in import_assists: p = codeassist.CompletionProposal(' : '.join(assist), 'autoimport') - import_assists.append(p) + proposals.append(p) return proposals def _insert_import(self, name, module):

ropemode/interface.py

ReplaceText(target='proposals' @(582,20)->(582,34))

class _CodeAssist(object): for assist in import_assists: p = codeassist.CompletionProposal(' : '.join(assist), 'autoimport') import_assists.append(p) return proposals def _insert_import(self, name, module):

class _CodeAssist(object): for assist in import_assists: p = codeassist.CompletionProposal(' : '.join(assist), 'autoimport') proposals.append(p) return proposals def _insert_import(self, name, module):

https://:@github.com/pcraster/lue.git

7b961a25b3c8a55f443705d700924bef21ac918b

@@ -129,7 +129,7 @@ def sort_benchmarks_by_time( time_points = [item[0] for item in items] idxs = [item[1] for item in items] - assert all(t1 < t2 for t1, t2 in zip(time_points, time_points[1:])), time_points + assert all(t1 <= t2 for t1, t2 in zip(time_points, time_points[1:])), time_points epoch = time_points[0] return idxs, epoch

benchmark/lue/benchmark/util.py

ReplaceText(target='<=' @(132,18)->(132,19))

def sort_benchmarks_by_time( time_points = [item[0] for item in items] idxs = [item[1] for item in items] assert all(t1 < t2 for t1, t2 in zip(time_points, time_points[1:])), time_points epoch = time_points[0] return idxs, epoch

def sort_benchmarks_by_time( time_points = [item[0] for item in items] idxs = [item[1] for item in items] assert all(t1 <= t2 for t1, t2 in zip(time_points, time_points[1:])), time_points epoch = time_points[0] return idxs, epoch

https://:@github.com/dutradda/falcon-swagger.git

1c532bf5a816b895a7964e5725c633a540a50b24

@@ -53,7 +53,7 @@ model.__routes__.add(Route('/test/{id}', 'POST', action)) @pytest.fixture def app(session): - return HttpAPI(session.bind, [model]) + return HttpAPI([model], session.bind) class TestUsersModelIntegrationWithAuthorizationHook(object):

tests/integration/domain/users/test_users_model_integration.py

ArgSwap(idxs=0<->1 @(56,11)->(56,18))

model.__routes__.add(Route('/test/{id}', 'POST', action)) @pytest.fixture def app(session): return HttpAPI(session.bind, [model]) class TestUsersModelIntegrationWithAuthorizationHook(object):

model.__routes__.add(Route('/test/{id}', 'POST', action)) @pytest.fixture def app(session): return HttpAPI([model], session.bind) class TestUsersModelIntegrationWithAuthorizationHook(object):

https://:@github.com/dutradda/falcon-swagger.git

4fbd5298af47fb91f80a602671e1920751bb6936

@@ -226,7 +226,7 @@ class ModelJobsMetaMixin(type): def _set_job(cls, job_hash, status, session): key = cls._build_jobs_key() session.redis_bind.hset(key, job_hash, json.dumps(status)) - if session.redis_bind.ttl(key) > 0: + if session.redis_bind.ttl(key) < 0: session.redis_bind.expire(key, 7*24*60*60) def _build_jobs_key(cls):

falconswagger/models/orm/http.py

ReplaceText(target='<' @(229,39)->(229,40))

class ModelJobsMetaMixin(type): def _set_job(cls, job_hash, status, session): key = cls._build_jobs_key() session.redis_bind.hset(key, job_hash, json.dumps(status)) if session.redis_bind.ttl(key) > 0: session.redis_bind.expire(key, 7*24*60*60) def _build_jobs_key(cls):

class ModelJobsMetaMixin(type): def _set_job(cls, job_hash, status, session): key = cls._build_jobs_key() session.redis_bind.hset(key, job_hash, json.dumps(status)) if session.redis_bind.ttl(key) < 0: session.redis_bind.expire(key, 7*24*60*60) def _build_jobs_key(cls):

https://:@github.com/peter-schmidbauer/pythovolve.git

85961b03f0086d97a01d82bcaa520be1a4fde052

@@ -40,7 +40,7 @@ class Individual: if not isinstance(other, Individual): return NotImplemented try: - return self.score < other.score + return self.score == other.score except ValueError: return NotImplemented

pythovolve/individuals.py

ReplaceText(target='==' @(43,30)->(43,31))

class Individual: if not isinstance(other, Individual): return NotImplemented try: return self.score < other.score except ValueError: return NotImplemented

class Individual: if not isinstance(other, Individual): return NotImplemented try: return self.score == other.score except ValueError: return NotImplemented

https://:@github.com/Balandat/pyDR.git

d9405eb75fa03ad09891816342e0e210b29d8d7f

@@ -668,7 +668,7 @@ def get_energy_charges(index, tariff, isRT=False, LMP=None, cidx = chronRates.index pdpind = ((cidx.hour >= 12) & (cidx.hour < 18) & (cidx.normalize().isin(pdp_days))) - chronRates.loc[pdpind, 'EnergyCharge'] = pdpchrg + chronRates.loc[pdpind, 'EnergyCharge'] += pdpchrg chronRates = chronRates.tz_convert('GMT') if isRT: chronRates['EnergyCharge'] += LMP.loc[index[0]:index[-1]] / 1000.0

pyDR/utils.py

ReplaceText(target='+=' @(671,47)->(671,48))

def get_energy_charges(index, tariff, isRT=False, LMP=None, cidx = chronRates.index pdpind = ((cidx.hour >= 12) & (cidx.hour < 18) & (cidx.normalize().isin(pdp_days))) chronRates.loc[pdpind, 'EnergyCharge'] = pdpchrg chronRates = chronRates.tz_convert('GMT') if isRT: chronRates['EnergyCharge'] += LMP.loc[index[0]:index[-1]] / 1000.0

def get_energy_charges(index, tariff, isRT=False, LMP=None, cidx = chronRates.index pdpind = ((cidx.hour >= 12) & (cidx.hour < 18) & (cidx.normalize().isin(pdp_days))) chronRates.loc[pdpind, 'EnergyCharge'] += pdpchrg chronRates = chronRates.tz_convert('GMT') if isRT: chronRates['EnergyCharge'] += LMP.loc[index[0]:index[-1]] / 1000.0

https://:@github.com/Toranktto/CraftProtocol.git

83edf8e43fcac26d0fb517f3bc4890e5350c93de

@@ -35,7 +35,7 @@ class WindowItemsPacket(BasePacket): for slot_data in packet.get_slots(): StreamIO.write_short(stream, slot_data.get_id()) - if slot_data.is_empty(): + if not slot_data.is_empty(): StreamIO.write_byte(stream, slot_data.get_count()) StreamIO.write_short(stream, slot_data.get_damage()) NBTSerializer.write(stream, slot_data.get_tag())

CraftProtocol/Protocol/v1_10/Packet/Play/WindowItemsPacket.py

ReplaceText(target='not ' @(38,15)->(38,15))

class WindowItemsPacket(BasePacket): for slot_data in packet.get_slots(): StreamIO.write_short(stream, slot_data.get_id()) if slot_data.is_empty(): StreamIO.write_byte(stream, slot_data.get_count()) StreamIO.write_short(stream, slot_data.get_damage()) NBTSerializer.write(stream, slot_data.get_tag())

class WindowItemsPacket(BasePacket): for slot_data in packet.get_slots(): StreamIO.write_short(stream, slot_data.get_id()) if not slot_data.is_empty(): StreamIO.write_byte(stream, slot_data.get_count()) StreamIO.write_short(stream, slot_data.get_damage()) NBTSerializer.write(stream, slot_data.get_tag())

https://:@github.com/Christensen-Lab-Dartmouth/PyMethylProcess.git

01ff59ea0c1b13bfc3bac07e16851209ac279f21

@@ -299,7 +299,7 @@ def combine_methylation_arrays(input_pkls, optional_input_pkl_dir, output_pkl, e input_pkls=glob.glob(os.path.join(optional_input_pkl_dir,'*','methyl_array.pkl')) if exclude: input_pkls=(np.array(input_pkls)[~np.isin(np.vectorize(lambda x: x.split('/')[-2])(input_pkls),np.array(exclude))]).tolist() - if len(input_pkls) > 0: + if len(input_pkls) > 1: base_methyl_array=MethylationArray(*extract_pheno_beta_df_from_pickle_dict(pickle.load(open(input_pkls[0],'rb')), '')) methyl_arrays_generator = (MethylationArray(*extract_pheno_beta_df_from_pickle_dict(pickle.load(open(input_pkl,'rb')), '')) for input_pkl in input_pkls[1:]) list_methyl_arrays = MethylationArrays([base_methyl_array])

build/lib/pymethylprocess/preprocess.py

ReplaceText(target='1' @(302,25)->(302,26))

def combine_methylation_arrays(input_pkls, optional_input_pkl_dir, output_pkl, e input_pkls=glob.glob(os.path.join(optional_input_pkl_dir,'*','methyl_array.pkl')) if exclude: input_pkls=(np.array(input_pkls)[~np.isin(np.vectorize(lambda x: x.split('/')[-2])(input_pkls),np.array(exclude))]).tolist() if len(input_pkls) > 0: base_methyl_array=MethylationArray(*extract_pheno_beta_df_from_pickle_dict(pickle.load(open(input_pkls[0],'rb')), '')) methyl_arrays_generator = (MethylationArray(*extract_pheno_beta_df_from_pickle_dict(pickle.load(open(input_pkl,'rb')), '')) for input_pkl in input_pkls[1:]) list_methyl_arrays = MethylationArrays([base_methyl_array])

def combine_methylation_arrays(input_pkls, optional_input_pkl_dir, output_pkl, e input_pkls=glob.glob(os.path.join(optional_input_pkl_dir,'*','methyl_array.pkl')) if exclude: input_pkls=(np.array(input_pkls)[~np.isin(np.vectorize(lambda x: x.split('/')[-2])(input_pkls),np.array(exclude))]).tolist() if len(input_pkls) > 1: base_methyl_array=MethylationArray(*extract_pheno_beta_df_from_pickle_dict(pickle.load(open(input_pkls[0],'rb')), '')) methyl_arrays_generator = (MethylationArray(*extract_pheno_beta_df_from_pickle_dict(pickle.load(open(input_pkl,'rb')), '')) for input_pkl in input_pkls[1:]) list_methyl_arrays = MethylationArrays([base_methyl_array])

https://:@github.com/AndreasSteiner/python-pptx.git

3a66082b1326a4263ea6f624a3a263faad65d4c5

@@ -998,7 +998,7 @@ def then_categories_levels_contains_count_CategoryLevel_objs(context, count): def then_categories_number_format_is_value(context, value): expected_value = value number_format = context.categories.number_format - assert number_format == expected_value, 'got %s' % expected_value + assert number_format == expected_value, 'got %s' % number_format @then('category.add_sub_category(name) is a Category object')

features/steps/chart.py

ReplaceText(target='number_format' @(1001,55)->(1001,69))

def then_categories_levels_contains_count_CategoryLevel_objs(context, count): def then_categories_number_format_is_value(context, value): expected_value = value number_format = context.categories.number_format assert number_format == expected_value, 'got %s' % expected_value @then('category.add_sub_category(name) is a Category object')

def then_categories_levels_contains_count_CategoryLevel_objs(context, count): def then_categories_number_format_is_value(context, value): expected_value = value number_format = context.categories.number_format assert number_format == expected_value, 'got %s' % number_format @then('category.add_sub_category(name) is a Category object')

https://:@github.com/dtkav/specific.git

44fc513eaa8f8746eafce36749b8564a0a03a0e8

@@ -127,7 +127,7 @@ def validate_array(schema, data): return error # Run each sub-item through the list of validators. for func in VALIDATORS: - error = func(subschema, subval) + error = func(subschema, converted_value) if error: return error

connexion/decorators/validation.py

ReplaceText(target='converted_value' @(130,36)->(130,42))

def validate_array(schema, data): return error # Run each sub-item through the list of validators. for func in VALIDATORS: error = func(subschema, subval) if error: return error

def validate_array(schema, data): return error # Run each sub-item through the list of validators. for func in VALIDATORS: error = func(subschema, converted_value) if error: return error

https://:@github.com/kreczko/gitlab-migrate.git

8dd6f993bc443574e0d3e45776726b6f71141037

@@ -36,7 +36,7 @@ def migration_instructions(conn_src, conn_dst, migrate): if user: names = None if user['projects'] != '--all--': - names = content['projects'] + names = user['projects'] user_projects = glc.user_projects(conn_src, names=names, statistics=False) return instructions, user_projects

gitlab_migrate/migrate.py

ReplaceText(target='user' @(39,20)->(39,27))

def migration_instructions(conn_src, conn_dst, migrate): if user: names = None if user['projects'] != '--all--': names = content['projects'] user_projects = glc.user_projects(conn_src, names=names, statistics=False) return instructions, user_projects

def migration_instructions(conn_src, conn_dst, migrate): if user: names = None if user['projects'] != '--all--': names = user['projects'] user_projects = glc.user_projects(conn_src, names=names, statistics=False) return instructions, user_projects

https://:@github.com/kreczko/gitlab-migrate.git

ec939be20fccea9337bda4fafce7605170bb31be

@@ -57,7 +57,7 @@ def cli(config_file, version, plain, noop): dst_server = config.servers['destination'] gl_src = glc.connect(src_server.url, src_server.auth_token, ssl_verify=src_server.ssl_verify) - gl_dst = glc.connect(dst_server.url, dst_server.auth_token, ssl_verify=src_server.ssl_verify) + gl_dst = glc.connect(dst_server.url, dst_server.auth_token, ssl_verify=dst_server.ssl_verify) group_instructions, user_instructions = migration_instructions(gl_src, gl_dst, config.migrate)

gitlab_migrate/migrate.py

ReplaceText(target='dst_server' @(60,75)->(60,85))

def cli(config_file, version, plain, noop): dst_server = config.servers['destination'] gl_src = glc.connect(src_server.url, src_server.auth_token, ssl_verify=src_server.ssl_verify) gl_dst = glc.connect(dst_server.url, dst_server.auth_token, ssl_verify=src_server.ssl_verify) group_instructions, user_instructions = migration_instructions(gl_src, gl_dst, config.migrate)

def cli(config_file, version, plain, noop): dst_server = config.servers['destination'] gl_src = glc.connect(src_server.url, src_server.auth_token, ssl_verify=src_server.ssl_verify) gl_dst = glc.connect(dst_server.url, dst_server.auth_token, ssl_verify=dst_server.ssl_verify) group_instructions, user_instructions = migration_instructions(gl_src, gl_dst, config.migrate)

https://:@github.com/igrek51/cliglue.git

2de2f9599f15422234a4ccdb9d62c08bd88074ce

@@ -116,7 +116,7 @@ def test_default_help_when_no_arguments(): def test_hiding_internal_options(): with MockIO('--help') as mockio: CliBuilder(hide_internal=True).run() - assert '--bash-install' in mockio.output() + assert '--bash-install' not in mockio.output() assert '--bash-autocomplete' not in mockio.output() with MockIO('--help') as mockio: CliBuilder(hide_internal=False).run()

tests/help/test_help.py

ReplaceText(target=' not in ' @(119,31)->(119,35))

def test_default_help_when_no_arguments(): def test_hiding_internal_options(): with MockIO('--help') as mockio: CliBuilder(hide_internal=True).run() assert '--bash-install' in mockio.output() assert '--bash-autocomplete' not in mockio.output() with MockIO('--help') as mockio: CliBuilder(hide_internal=False).run()

def test_default_help_when_no_arguments(): def test_hiding_internal_options(): with MockIO('--help') as mockio: CliBuilder(hide_internal=True).run() assert '--bash-install' not in mockio.output() assert '--bash-autocomplete' not in mockio.output() with MockIO('--help') as mockio: CliBuilder(hide_internal=False).run()

https://:@github.com/alex-fe/Graphml-to-SVG-converter.git

759cb682f91e023a80f64fa4234edf0cded4fd5f

@@ -53,7 +53,7 @@ class Graph(NameMixin): **label_kwargs ): if geometry is None: - geometry = Geometry(height, width, x, y) + geometry = Geometry(width, height, x, y) if fill is None: fill = Fill(fill_color, transparent) if border is None:

app.py

ArgSwap(idxs=0<->1 @(56,23)->(56,31))

class Graph(NameMixin): **label_kwargs ): if geometry is None: geometry = Geometry(height, width, x, y) if fill is None: fill = Fill(fill_color, transparent) if border is None:

class Graph(NameMixin): **label_kwargs ): if geometry is None: geometry = Geometry(width, height, x, y) if fill is None: fill = Fill(fill_color, transparent) if border is None:

https://:@bitbucket.org/mbachett/maltpynt.git

f79c6b6ff1fb7e6bb0f3d33a866e220f0b9ff0ed

@@ -14,7 +14,7 @@ def mp_calc_lags(freqs, cpds, pds1, pds2, n_chunks, rebin): lags = np.angle(cpds) / (2 * np.pi * freqs) sigcpd = np.absolute(cpds) - rawcof = (sigcpd) ** 2 / ((pds1) * (pds1)) + rawcof = (sigcpd) ** 2 / ((pds1) * (pds2)) dum = (1. - rawcof) / (2. * rawcof)

maltpynt/mp_lags.py

ReplaceText(target='pds2' @(17,40)->(17,44))

def mp_calc_lags(freqs, cpds, pds1, pds2, n_chunks, rebin): lags = np.angle(cpds) / (2 * np.pi * freqs) sigcpd = np.absolute(cpds) rawcof = (sigcpd) ** 2 / ((pds1) * (pds1)) dum = (1. - rawcof) / (2. * rawcof)

def mp_calc_lags(freqs, cpds, pds1, pds2, n_chunks, rebin): lags = np.angle(cpds) / (2 * np.pi * freqs) sigcpd = np.absolute(cpds) rawcof = (sigcpd) ** 2 / ((pds1) * (pds2)) dum = (1. - rawcof) / (2. * rawcof)

https://:@github.com/Lantero/battlebots.git

253d8e64895f7b7490e8d79e6b65fb39249f0257

@@ -41,7 +41,7 @@ class Board(object): def transposed_index(self, index): """ Return the transposed index """ - return index % self.row_size * self.row_size + index / self.row_size + return index % self.row_size * self.row_size + index // self.row_size def transposed_board(self): """ Return the transposed board """

battlebots/board.py

ReplaceText(target='//' @(44,61)->(44,62))

class Board(object): def transposed_index(self, index): """ Return the transposed index """ return index % self.row_size * self.row_size + index / self.row_size def transposed_board(self): """ Return the transposed board """

class Board(object): def transposed_index(self, index): """ Return the transposed index """ return index % self.row_size * self.row_size + index // self.row_size def transposed_board(self): """ Return the transposed board """

https://:@github.com/narfman0/jeeves.git

a4e0401053c41d7d584d316d05845ec75d79c9a8

@@ -30,7 +30,7 @@ class Conversation(object): plugin, text = self.brain.query(input) if plugin and text: try: - plugin.handle(input, self.mic) + plugin.handle(text, self.mic) except Exception: self._logger.error('Failed to execute module', exc_info=True)

client/conversation.py

ReplaceText(target='text' @(33,38)->(33,43))

class Conversation(object): plugin, text = self.brain.query(input) if plugin and text: try: plugin.handle(input, self.mic) except Exception: self._logger.error('Failed to execute module', exc_info=True)

class Conversation(object): plugin, text = self.brain.query(input) if plugin and text: try: plugin.handle(text, self.mic) except Exception: self._logger.error('Failed to execute module', exc_info=True)

https://:@bitbucket.org/dranew/remixt.git

6aa375e5e1ba81d06e3b5f9d1739e79b22678d9c

@@ -22,5 +22,5 @@ if __name__ == '__main__': if args['config'] is not None: execfile(args['config'], {}, config) - remixt.ref_data.create_ref_data(ref_data_dir, config) - + remixt.ref_data.create_ref_data(config, ref_data_dir) +

remixt/setup/remixt_create_ref_data.py

ArgSwap(idxs=0<->1 @(25,4)->(25,35))

if __name__ == '__main__': if args['config'] is not None: execfile(args['config'], {}, config) remixt.ref_data.create_ref_data(ref_data_dir, config)

if __name__ == '__main__': if args['config'] is not None: execfile(args['config'], {}, config) remixt.ref_data.create_ref_data(config, ref_data_dir)

https://:@bitbucket.org/dranew/remixt.git

6aa375e5e1ba81d06e3b5f9d1739e79b22678d9c

@@ -28,7 +28,7 @@ if __name__ == '__main__': pyp = pypeliner.app.Pypeline(config=config) - workflow = remixt.mappability.bwa.workflow.create_bwa_mappability_workflow(ref_data_dir, config) + workflow = remixt.mappability.bwa.workflow.create_bwa_mappability_workflow(config, ref_data_dir) pyp.run(workflow)

remixt/setup/remixt_mappability_bwa.py

ArgSwap(idxs=0<->1 @(31,15)->(31,78))

if __name__ == '__main__': pyp = pypeliner.app.Pypeline(config=config) workflow = remixt.mappability.bwa.workflow.create_bwa_mappability_workflow(ref_data_dir, config) pyp.run(workflow)

if __name__ == '__main__': pyp = pypeliner.app.Pypeline(config=config) workflow = remixt.mappability.bwa.workflow.create_bwa_mappability_workflow(config, ref_data_dir) pyp.run(workflow)

https://:@github.com/visym/vipy.git

8ac8b78489487631a161fa7ed71cd700ea700154

@@ -375,7 +375,7 @@ class Image(object): def url(self, url=None, username=None, password=None, sha1=None, ignoreUrlErrors=None): """Image URL and URL download properties""" - if url is None: + if url is not None: self._url = url # this does not change anything else, better to use constructor if username is not None: self._urluser = username # basic authentication

vipy/image.py

ReplaceText(target=' is not ' @(378,14)->(378,18))

class Image(object): def url(self, url=None, username=None, password=None, sha1=None, ignoreUrlErrors=None): """Image URL and URL download properties""" if url is None: self._url = url # this does not change anything else, better to use constructor if username is not None: self._urluser = username # basic authentication

class Image(object): def url(self, url=None, username=None, password=None, sha1=None, ignoreUrlErrors=None): """Image URL and URL download properties""" if url is not None: self._url = url # this does not change anything else, better to use constructor if username is not None: self._urluser = username # basic authentication

https://:@github.com/scubbx/webguitest.git

ad615df8b42c2adadf5759951ed1029e7a186217

@@ -35,7 +35,7 @@ if pyautoguiAvailable: numTries += 1 time.sleep(1) if elemToClick is None: - print(" (x): could not locate image {}".format(elemToClick)) + print(" (x): could not locate image {}".format(imagepath)) return False time.sleep(1) pyautogui.click(pyautogui.center(elemToClick))

webguitest/clickGraphic.py

ReplaceText(target='imagepath' @(38,62)->(38,73))

if pyautoguiAvailable: numTries += 1 time.sleep(1) if elemToClick is None: print(" (x): could not locate image {}".format(elemToClick)) return False time.sleep(1) pyautogui.click(pyautogui.center(elemToClick))

if pyautoguiAvailable: numTries += 1 time.sleep(1) if elemToClick is None: print(" (x): could not locate image {}".format(imagepath)) return False time.sleep(1) pyautogui.click(pyautogui.center(elemToClick))

https://:@github.com/PragmaticMates/django-inventor.git

2762f3a34313372dd548e0bda6fd24db622bf703

@@ -11,5 +11,5 @@ class PlanQuerySet(models.QuerySet): class UserPlanQuerySet(models.QuerySet): def expires_in(self, days=7): - threshold = now() - timedelta(days=days) + threshold = now() + timedelta(days=days) return self.filter(expiration=threshold.date())

inventor/core/subscriptions/querysets.py

ReplaceText(target='+' @(14,26)->(14,27))

class PlanQuerySet(models.QuerySet): class UserPlanQuerySet(models.QuerySet): def expires_in(self, days=7): threshold = now() - timedelta(days=days) return self.filter(expiration=threshold.date())

class PlanQuerySet(models.QuerySet): class UserPlanQuerySet(models.QuerySet): def expires_in(self, days=7): threshold = now() + timedelta(days=days) return self.filter(expiration=threshold.date())

https://:@github.com/brentp/combined-pvalues.git

7726e0f8b5b35bb43059ae547ca2297bee54f5ec

@@ -141,7 +141,7 @@ def pipeline(col_num, step, dist, prefix, threshold, seed, bed_files, mlog=False fregions = prefix + ".regions.bed" with open(fregions, "w") as fh: list(peaks.peaks(prefix + ".fdr.bed", -1, threshold, seed, - step, fh, operator.le)) + dist, fh, operator.le)) n_regions = sum(1 for _ in open(fregions)) print >>sys.stderr, "wrote: %s (%i regions)" % (fregions, n_regions)

cpv/pipeline.py

ReplaceText(target='dist' @(144,12)->(144,16))

def pipeline(col_num, step, dist, prefix, threshold, seed, bed_files, mlog=False fregions = prefix + ".regions.bed" with open(fregions, "w") as fh: list(peaks.peaks(prefix + ".fdr.bed", -1, threshold, seed, step, fh, operator.le)) n_regions = sum(1 for _ in open(fregions)) print >>sys.stderr, "wrote: %s (%i regions)" % (fregions, n_regions)

def pipeline(col_num, step, dist, prefix, threshold, seed, bed_files, mlog=False fregions = prefix + ".regions.bed" with open(fregions, "w") as fh: list(peaks.peaks(prefix + ".fdr.bed", -1, threshold, seed, dist, fh, operator.le)) n_regions = sum(1 for _ in open(fregions)) print >>sys.stderr, "wrote: %s (%i regions)" % (fregions, n_regions)

https://:@github.com/axiomabsolute/cs410-information-retrieval.git

18725a0cb50a579dc3ad2c32b6fc54451bdb23b3

@@ -24,7 +24,7 @@ by_lookup_match_piece = by(by_lookup_match, by_piece_id) by_lookup_match_stem = by(by_lookup_match, by_stem) def bm25_idf(N, df): - assert(N > df) + assert(N >= df) return log( (N - df + 0.5) / (df + 0.5) ) def bm25_tf(tf, k=1.2):

firms/graders.py

ReplaceText(target='>=' @(27,13)->(27,14))

by_lookup_match_piece = by(by_lookup_match, by_piece_id) by_lookup_match_stem = by(by_lookup_match, by_stem) def bm25_idf(N, df): assert(N > df) return log( (N - df + 0.5) / (df + 0.5) ) def bm25_tf(tf, k=1.2):

by_lookup_match_piece = by(by_lookup_match, by_piece_id) by_lookup_match_stem = by(by_lookup_match, by_stem) def bm25_idf(N, df): assert(N >= df) return log( (N - df + 0.5) / (df + 0.5) ) def bm25_tf(tf, k=1.2):

https://:@github.com/JayYip/bert-multitask-service.git

a22de7ec24ba873f699e989533122f36b4f6f693

@@ -169,7 +169,7 @@ class BertModel(object): if token_type_ids is None: token_type_ids = tf.zeros(shape=[batch_size, seq_length], dtype=tf.int32) - with tf.variable_scope("bert", scope): + with tf.variable_scope(scope, "bert"): with tf.variable_scope("embeddings"): # Perform embedding lookup on the word ids. (self.embedding_output, self.embedding_table) = embedding_lookup(

modeling.py

ArgSwap(idxs=0<->1 @(172,9)->(172,26))

class BertModel(object): if token_type_ids is None: token_type_ids = tf.zeros(shape=[batch_size, seq_length], dtype=tf.int32) with tf.variable_scope("bert", scope): with tf.variable_scope("embeddings"): # Perform embedding lookup on the word ids. (self.embedding_output, self.embedding_table) = embedding_lookup(

class BertModel(object): if token_type_ids is None: token_type_ids = tf.zeros(shape=[batch_size, seq_length], dtype=tf.int32) with tf.variable_scope(scope, "bert"): with tf.variable_scope("embeddings"): # Perform embedding lookup on the word ids. (self.embedding_output, self.embedding_table) = embedding_lookup(

https://:@github.com/JayYip/bert-multitask-service.git

52d354bf04ba003a32b5c175775a574064569dcc

@@ -22,7 +22,7 @@ def get_args(): args = parser.parse_args() param_str = '\n'.join(['%20s = %s' % (k, v) for k, v in sorted(vars(args).items())]) print('usage:\n{0}\nparameters: \n{1}'.format(' '.join([x for x in sys.argv]), param_str)) - return parser + return args if __name__ == '__main__':

app.py

ReplaceText(target='args' @(25,11)->(25,17))

def get_args(): args = parser.parse_args() param_str = '\n'.join(['%20s = %s' % (k, v) for k, v in sorted(vars(args).items())]) print('usage:\n{0}\nparameters: \n{1}'.format(' '.join([x for x in sys.argv]), param_str)) return parser if __name__ == '__main__':

def get_args(): args = parser.parse_args() param_str = '\n'.join(['%20s = %s' % (k, v) for k, v in sorted(vars(args).items())]) print('usage:\n{0}\nparameters: \n{1}'.format(' '.join([x for x in sys.argv]), param_str)) return args if __name__ == '__main__':

https://:@github.com/JayYip/bert-multitask-service.git

4edc2497de0d8ea45d1afdbe636f20e51f2fa044

@@ -166,7 +166,7 @@ class BertWorker(Process): def input_fn_builder(self, worker): def gen(): - while not True: + while True: if self.result: num_result = len(self.result) worker.send_multipart([ident, b'', pickle.dumps(self.result)])

service/server.py

ReplaceText(target='' @(169,18)->(169,22))

class BertWorker(Process): def input_fn_builder(self, worker): def gen(): while not True: if self.result: num_result = len(self.result) worker.send_multipart([ident, b'', pickle.dumps(self.result)])

class BertWorker(Process): def input_fn_builder(self, worker): def gen(): while True: if self.result: num_result = len(self.result) worker.send_multipart([ident, b'', pickle.dumps(self.result)])

https://:@github.com/WZBSocialScienceCenter/patternlite.git

cdb9262675a96df4ce7b5d25f53b7dc22f043078

@@ -129,7 +129,7 @@ m.save(f, final=True) print("loading model...") f = os.path.join(os.path.dirname(__file__), "en-model.slp") -lexicon.model = Model.load(lexicon, f) +lexicon.model = Model.load(f, lexicon) # To test the accuracy of the language model, # we can compare a tagged corpus to the predicted tags.

examples/05-vector/07-slp.py

ArgSwap(idxs=0<->1 @(132,16)->(132,26))

m.save(f, final=True) print("loading model...") f = os.path.join(os.path.dirname(__file__), "en-model.slp") lexicon.model = Model.load(lexicon, f) # To test the accuracy of the language model, # we can compare a tagged corpus to the predicted tags.

m.save(f, final=True) print("loading model...") f = os.path.join(os.path.dirname(__file__), "en-model.slp") lexicon.model = Model.load(f, lexicon) # To test the accuracy of the language model, # we can compare a tagged corpus to the predicted tags.

https://:@github.com/jsh9/python-plot-utilities.git

bbf48002e85a5c27afa879e256184dfa185943ce

@@ -1174,7 +1174,7 @@ def piechart(target_array, class_names=None, dropna=False, top_n=None, val = int(round(pct*total/100.0)) return '{p:.1f}% ({v:d})'.format(p=pct, v=val) return my_autopct - autopct = make_autopct(x) + autopct = make_autopct(counts) elif display == None: autopct = '' else:

plot_utils.py

ReplaceText(target='counts' @(1177,31)->(1177,32))

def piechart(target_array, class_names=None, dropna=False, top_n=None, val = int(round(pct*total/100.0)) return '{p:.1f}% ({v:d})'.format(p=pct, v=val) return my_autopct autopct = make_autopct(x) elif display == None: autopct = '' else:

def piechart(target_array, class_names=None, dropna=False, top_n=None, val = int(round(pct*total/100.0)) return '{p:.1f}% ({v:d})'.format(p=pct, v=val) return my_autopct autopct = make_autopct(counts) elif display == None: autopct = '' else:

https://:@github.com/maurosilber/binlet.git

0c47b4979709a285c437e1090ca6503e6d3dfccf

@@ -57,7 +57,7 @@ def binlet_level(inputs, threshold, valfun, covfun, bin_args, args, level, axes) # Calculate current level inputs_coeffs = tuple(modwt_level_nd(x, level, axes) for x in inputs) - bin_args = tuple(modwt_level_nd(x, level, axes, approx_only=True) for x in inputs) + bin_args = tuple(modwt_level_nd(x, level, axes, approx_only=True) for x in bin_args) # Threshold current level for key, mask in threshold_masks.items():

binlet/binlet.py

ReplaceText(target='bin_args' @(60,79)->(60,85))

def binlet_level(inputs, threshold, valfun, covfun, bin_args, args, level, axes) # Calculate current level inputs_coeffs = tuple(modwt_level_nd(x, level, axes) for x in inputs) bin_args = tuple(modwt_level_nd(x, level, axes, approx_only=True) for x in inputs) # Threshold current level for key, mask in threshold_masks.items():

def binlet_level(inputs, threshold, valfun, covfun, bin_args, args, level, axes) # Calculate current level inputs_coeffs = tuple(modwt_level_nd(x, level, axes) for x in inputs) bin_args = tuple(modwt_level_nd(x, level, axes, approx_only=True) for x in bin_args) # Threshold current level for key, mask in threshold_masks.items():

https://:@gitlab.com/betse/betsee.git

83abaec314e607797890d3f25983c03bc6727ab8

@@ -120,7 +120,7 @@ def sanitize_classifiers( # formally classify this version as such. for python_version_minor in range( python_version_min_parts[1], python_version_minor_max): - classifiers.append( + classifiers_sane.append( 'Programming Language :: Python :: {}.{}'.format( PYTHON_VERSION_MAJOR, python_version_minor,)) # print('classifiers: {}'.format(_CLASSIFIERS))

betsee_setup/beuputil.py

ReplaceText(target='classifiers_sane' @(123,8)->(123,19))

def sanitize_classifiers( # formally classify this version as such. for python_version_minor in range( python_version_min_parts[1], python_version_minor_max): classifiers.append( 'Programming Language :: Python :: {}.{}'.format( PYTHON_VERSION_MAJOR, python_version_minor,)) # print('classifiers: {}'.format(_CLASSIFIERS))

def sanitize_classifiers( # formally classify this version as such. for python_version_minor in range( python_version_min_parts[1], python_version_minor_max): classifiers_sane.append( 'Programming Language :: Python :: {}.{}'.format( PYTHON_VERSION_MAJOR, python_version_minor,)) # print('classifiers: {}'.format(_CLASSIFIERS))

https://:@github.com/lensvol/pybetter.git

625e8fc854c7544df702d6001a57e46838b7df70

@@ -15,7 +15,7 @@ class EqualsNoneIsNoneTransformer(cst.CSTTransformer): ): return original_node - return original_node.with_changes( + return updated_node.with_changes( operator=cst.Is( whitespace_after=original_node.operator.whitespace_after, whitespace_before=original_node.operator.whitespace_before,

pybetter/transformers/equals_none.py

ReplaceText(target='updated_node' @(18,15)->(18,28))

class EqualsNoneIsNoneTransformer(cst.CSTTransformer): ): return original_node return original_node.with_changes( operator=cst.Is( whitespace_after=original_node.operator.whitespace_after, whitespace_before=original_node.operator.whitespace_before,

class EqualsNoneIsNoneTransformer(cst.CSTTransformer): ): return original_node return updated_node.with_changes( operator=cst.Is( whitespace_after=original_node.operator.whitespace_after, whitespace_before=original_node.operator.whitespace_before,

https://:@github.com/lensvol/pybetter.git

625e8fc854c7544df702d6001a57e46838b7df70

@@ -14,4 +14,4 @@ class RemoveParenthesesFromReturn(cst.CSTTransformer): changed_tuple = original_node.value.with_changes(lpar=[], rpar=[]) - return original_node.with_changes(value=changed_tuple) + return updated_node.with_changes(value=changed_tuple)

pybetter/transformers/parenthesized_return.py

ReplaceText(target='updated_node' @(17,15)->(17,28))

class RemoveParenthesesFromReturn(cst.CSTTransformer): changed_tuple = original_node.value.with_changes(lpar=[], rpar=[]) return original_node.with_changes(value=changed_tuple)

class RemoveParenthesesFromReturn(cst.CSTTransformer): changed_tuple = original_node.value.with_changes(lpar=[], rpar=[]) return updated_node.with_changes(value=changed_tuple)

https://:@github.com/leprikon-cz/leprikon.git

1c31a9f054d79c1f75ee4bcd82be41d903e4f0f3

@@ -149,7 +149,7 @@ class EventRegistration(SubjectRegistration): if discount.accounted.date() <= d and discount.explanation.strip() ) return PaymentStatus( - price=self.price if self.approved and self.approved.date() < d else 0, + price=self.price if self.approved and self.approved.date() <= d else 0, discount=self.get_discounted(d), explanation=explanation, paid=self.get_paid(d),

leprikon/models/events.py

ReplaceText(target='<=' @(152,71)->(152,72))

class EventRegistration(SubjectRegistration): if discount.accounted.date() <= d and discount.explanation.strip() ) return PaymentStatus( price=self.price if self.approved and self.approved.date() < d else 0, discount=self.get_discounted(d), explanation=explanation, paid=self.get_paid(d),

class EventRegistration(SubjectRegistration): if discount.accounted.date() <= d and discount.explanation.strip() ) return PaymentStatus( price=self.price if self.approved and self.approved.date() <= d else 0, discount=self.get_discounted(d), explanation=explanation, paid=self.get_paid(d),

https://:@github.com/openclimatedata/openscm.git

1f492d38db2808bf7730b707266d53f35f0a2e09

@@ -1036,7 +1036,7 @@ class ScmDataFrameBase: # pylint: disable=too-many-public-methods # Convert from ParameterType to str parameter_type_str = ( "average" - if parameter_type == ParameterType.AVERAGE_TIMESERIES + if p_type == ParameterType.AVERAGE_TIMESERIES else "point" ) res._meta.loc[grp.index] = res._meta.loc[grp.index].assign(

openscm/scmdataframe/base.py

ReplaceText(target='p_type' @(1039,19)->(1039,33))

class ScmDataFrameBase: # pylint: disable=too-many-public-methods # Convert from ParameterType to str parameter_type_str = ( "average" if parameter_type == ParameterType.AVERAGE_TIMESERIES else "point" ) res._meta.loc[grp.index] = res._meta.loc[grp.index].assign(

class ScmDataFrameBase: # pylint: disable=too-many-public-methods # Convert from ParameterType to str parameter_type_str = ( "average" if p_type == ParameterType.AVERAGE_TIMESERIES else "point" ) res._meta.loc[grp.index] = res._meta.loc[grp.index].assign(

https://:@github.com/jvs/sourcer.git

f8175948d0ed0721ceb555837439b77246cdd0f9

@@ -341,7 +341,7 @@ class Parser(object): def _parse_text(self, term, pos): end = pos + len(term) part = self.source[pos : end] - yield ParseResult(part, end) if part == term else ParseFailure + yield ParseResult(term, end) if part == term else ParseFailure def _parse_token(self, term, pos): if pos >= len(self.source):

peg.py

ReplaceText(target='term' @(344,26)->(344,30))

class Parser(object): def _parse_text(self, term, pos): end = pos + len(term) part = self.source[pos : end] yield ParseResult(part, end) if part == term else ParseFailure def _parse_token(self, term, pos): if pos >= len(self.source):

class Parser(object): def _parse_text(self, term, pos): end = pos + len(term) part = self.source[pos : end] yield ParseResult(term, end) if part == term else ParseFailure def _parse_token(self, term, pos): if pos >= len(self.source):

https://:@github.com/SergSHV/SLRIC.git

30dccd92ce43affef13bd2731d20c525dcca6a31

@@ -38,7 +38,7 @@ def indirect_paths(g, path_lim, aggregation, criterion): if path_lim % 2 == 0: return indirect_paths(compute_path(g, g, aggregation, criterion), path_lim // 2, type, criterion) else: - return compute_path(g, indirect_paths(g, path_lim - 1, aggregation, criterion), type, criterion) + return compute_path(indirect_paths(g, path_lim - 1, aggregation, criterion), g, type, criterion) # Evaluate path strength [criterion: 0 (sum), 1 (min), 2 (multiplication)]

SLRIC/methods/indirect_influence.py

ArgSwap(idxs=0<->1 @(41,19)->(41,31))

def indirect_paths(g, path_lim, aggregation, criterion): if path_lim % 2 == 0: return indirect_paths(compute_path(g, g, aggregation, criterion), path_lim // 2, type, criterion) else: return compute_path(g, indirect_paths(g, path_lim - 1, aggregation, criterion), type, criterion) # Evaluate path strength [criterion: 0 (sum), 1 (min), 2 (multiplication)]

def indirect_paths(g, path_lim, aggregation, criterion): if path_lim % 2 == 0: return indirect_paths(compute_path(g, g, aggregation, criterion), path_lim // 2, type, criterion) else: return compute_path(indirect_paths(g, path_lim - 1, aggregation, criterion), g, type, criterion) # Evaluate path strength [criterion: 0 (sum), 1 (min), 2 (multiplication)]

https://:@github.com/jianhuupenn/ItClust.git

e09c84bfe42ededd15d95a5f618e83e3ded26271

@@ -163,7 +163,7 @@ class transfer_learning_clf(object): adata_test.obs["trajectory_"+str(i)]=trajectory_l[i] #labels=change_to_continuous(q_pred) - y_pred=np.asarray(np.argmax(q,axis=1),dtype=int) + y_pred=np.asarray(np.argmax(q_pred,axis=1),dtype=int) labels=y_pred.astype('U') labels=pd.Categorical(values=labels,categories=natsorted(np.unique(y_pred).astype('U')))

ItClust_package/ItClust/ItClust.py

ReplaceText(target='q_pred' @(166,36)->(166,37))

class transfer_learning_clf(object): adata_test.obs["trajectory_"+str(i)]=trajectory_l[i] #labels=change_to_continuous(q_pred) y_pred=np.asarray(np.argmax(q,axis=1),dtype=int) labels=y_pred.astype('U') labels=pd.Categorical(values=labels,categories=natsorted(np.unique(y_pred).astype('U')))

class transfer_learning_clf(object): adata_test.obs["trajectory_"+str(i)]=trajectory_l[i] #labels=change_to_continuous(q_pred) y_pred=np.asarray(np.argmax(q_pred,axis=1),dtype=int) labels=y_pred.astype('U') labels=pd.Categorical(values=labels,categories=natsorted(np.unique(y_pred).astype('U')))

https://:@github.com/datalad/git-annex-ria-remote.git

556dd2877b24dd277160c36ebeeb03082d19706f

@@ -117,7 +117,7 @@ class Install(Clone): path=path, dataset=dataset, description=description, - reckless=ephemeral, + reckless=reckless, alt_sources=alt_sources, result_filter=None, result_renderer='disabled',

ria_remote/install.py

ReplaceText(target='reckless' @(120,25)->(120,34))

class Install(Clone): path=path, dataset=dataset, description=description, reckless=ephemeral, alt_sources=alt_sources, result_filter=None, result_renderer='disabled',

class Install(Clone): path=path, dataset=dataset, description=description, reckless=reckless, alt_sources=alt_sources, result_filter=None, result_renderer='disabled',

https://:@github.com/dmnfarrell/smallrnaseq.git

e4d03158818e7b2d8a67428ace3c1ba9c0723c14

@@ -544,7 +544,7 @@ def print_read_stack(reads, refseq=None, outfile=None, cutoff=0, by=None, label= else: seqlen = reads.end.max() f = None - reads = reads[reads.reads>cutoff] + reads = reads[reads.reads>=cutoff] if by is not None: reads = reads.sort_values(by, ascending=False)

smallrnaseq/utils.py

ReplaceText(target='>=' @(547,29)->(547,30))

def print_read_stack(reads, refseq=None, outfile=None, cutoff=0, by=None, label= else: seqlen = reads.end.max() f = None reads = reads[reads.reads>cutoff] if by is not None: reads = reads.sort_values(by, ascending=False)

def print_read_stack(reads, refseq=None, outfile=None, cutoff=0, by=None, label= else: seqlen = reads.end.max() f = None reads = reads[reads.reads>=cutoff] if by is not None: reads = reads.sort_values(by, ascending=False)

https://:@github.com/dmnfarrell/smallrnaseq.git

eeed9c4b43346501da633ce78ac4d22440df4608

@@ -70,7 +70,7 @@ def run(opts): #novel prediction if ref_genome != '': print ('predicting novel mirnas..') - allreads = utils.combine_aligned_reads(temp_path, files, ref_genome) + allreads = utils.combine_aligned_reads(path, files, ref_genome) new,cl = novel.find_mirnas(allreads, cow_fasta) new.to_csv(os.path.join(out,'novel.csv'), index=False) novel.create_report(new, cl, species, filename=os.path.join(out, 'novel.html'))

smallrnaseq/app.py

ReplaceText(target='path' @(73,51)->(73,60))

def run(opts): #novel prediction if ref_genome != '': print ('predicting novel mirnas..') allreads = utils.combine_aligned_reads(temp_path, files, ref_genome) new,cl = novel.find_mirnas(allreads, cow_fasta) new.to_csv(os.path.join(out,'novel.csv'), index=False) novel.create_report(new, cl, species, filename=os.path.join(out, 'novel.html'))

def run(opts): #novel prediction if ref_genome != '': print ('predicting novel mirnas..') allreads = utils.combine_aligned_reads(path, files, ref_genome) new,cl = novel.find_mirnas(allreads, cow_fasta) new.to_csv(os.path.join(out,'novel.csv'), index=False) novel.create_report(new, cl, species, filename=os.path.join(out, 'novel.html'))

https://:@gitlab.com/danwin/fairways_py.git

28c15f9a3e5f59d8767bb803ec8024488b0bf4bd

@@ -64,7 +64,7 @@ class HttpQueryTemplate: rq_kwargs["headers"] = headers body = encoded_data if body: - rq_kwargs["data"] = data + rq_kwargs["data"] = encoded_data return rq_kwargs

fairways/io/generic/net.py

ReplaceText(target='encoded_data' @(67,32)->(67,36))

class HttpQueryTemplate: rq_kwargs["headers"] = headers body = encoded_data if body: rq_kwargs["data"] = data return rq_kwargs

class HttpQueryTemplate: rq_kwargs["headers"] = headers body = encoded_data if body: rq_kwargs["data"] = encoded_data return rq_kwargs

https://:@github.com/clusterking/clusterking.git

86816095fc6c1383b3088dbd93c72c16df8c9710

@@ -129,7 +129,7 @@ class BMFOM(FOM): (data1.df["cluster"] == cluster) & data1.df["bpoint"] ] bpoints2 = data2.df[ - (data1.df["cluster"] == cluster) & data2.df["bpoint"] + (data2.df["cluster"] == cluster) & data2.df["bpoint"] ] msg = "Found {} bpoints instead of 1 for dataset {}." if len(bpoints1) != 1:

clusterking/stability/fom.py

ReplaceText(target='data2' @(132,17)->(132,22))

class BMFOM(FOM): (data1.df["cluster"] == cluster) & data1.df["bpoint"] ] bpoints2 = data2.df[ (data1.df["cluster"] == cluster) & data2.df["bpoint"] ] msg = "Found {} bpoints instead of 1 for dataset {}." if len(bpoints1) != 1:

class BMFOM(FOM): (data1.df["cluster"] == cluster) & data1.df["bpoint"] ] bpoints2 = data2.df[ (data2.df["cluster"] == cluster) & data2.df["bpoint"] ] msg = "Found {} bpoints instead of 1 for dataset {}." if len(bpoints1) != 1:

https://:@github.com/clusterking/clusterking.git

bdc88d5a931d268d77e5f00119fcca5f16bd562a

@@ -611,7 +611,7 @@ class BundlePlot(object): plot_histogram(self.ax, self._bins, data, **hist_kw) hf_kw = dict(color=light_color) - hf_kw.update(hist_kwargs) + hf_kw.update(hist_fill_kwargs) plot_histogram_fill( self.ax, self._bins, data - err_low, data + err_high, **hf_kw

clusterking/plots/plot_bundles.py

ReplaceText(target='hist_fill_kwargs' @(614,21)->(614,32))

class BundlePlot(object): plot_histogram(self.ax, self._bins, data, **hist_kw) hf_kw = dict(color=light_color) hf_kw.update(hist_kwargs) plot_histogram_fill( self.ax, self._bins, data - err_low, data + err_high, **hf_kw

class BundlePlot(object): plot_histogram(self.ax, self._bins, data, **hist_kw) hf_kw = dict(color=light_color) hf_kw.update(hist_fill_kwargs) plot_histogram_fill( self.ax, self._bins, data - err_low, data + err_high, **hf_kw

https://:@github.com/julien6387/supvisors.git

5163605677362dbe30e3999bc45a44696e2222d9

@@ -60,7 +60,7 @@ class ProcessRules(object): a required process that is not in the starting sequence is forced to optional If addresses are not defined, all addresses are applicable """ # required MUST have start_sequence, so force to optional if no start_sequence - if self.required and self.start_sequence <= 0: + if self.required and self.start_sequence == 0: self.logger.warn('required forced to False because no start_sequence defined') self.required = False # if no addresses, consider all addresses

supervisors/process.py

ReplaceText(target='==' @(63,49)->(63,51))

class ProcessRules(object): a required process that is not in the starting sequence is forced to optional If addresses are not defined, all addresses are applicable """ # required MUST have start_sequence, so force to optional if no start_sequence if self.required and self.start_sequence <= 0: self.logger.warn('required forced to False because no start_sequence defined') self.required = False # if no addresses, consider all addresses

class ProcessRules(object): a required process that is not in the starting sequence is forced to optional If addresses are not defined, all addresses are applicable """ # required MUST have start_sequence, so force to optional if no start_sequence if self.required and self.start_sequence == 0: self.logger.warn('required forced to False because no start_sequence defined') self.required = False # if no addresses, consider all addresses

https://:@github.com/hncuong/topicmodel-lib.git

6257da7e5c9bf7d70d504a6acb62a538dbf91694

@@ -344,7 +344,7 @@ def load_mini_batch_term_frequency_from_term_frequency_file(fp, batch_size): tf = list_word[j].split(":") doc_terms[j - 1] = int(tf[0]) doc_frequency[j - 1] = int(tf[1]) - mini_batch.append_doc(doc, doc_frequency) + mini_batch.append_doc(doc_terms, doc_frequency) return mini_batch, end_file except Exception as inst: logging.error(inst)

tmlib/datasets/base.py

ReplaceText(target='doc_terms' @(347,34)->(347,37))

def load_mini_batch_term_frequency_from_term_frequency_file(fp, batch_size): tf = list_word[j].split(":") doc_terms[j - 1] = int(tf[0]) doc_frequency[j - 1] = int(tf[1]) mini_batch.append_doc(doc, doc_frequency) return mini_batch, end_file except Exception as inst: logging.error(inst)

def load_mini_batch_term_frequency_from_term_frequency_file(fp, batch_size): tf = list_word[j].split(":") doc_terms[j - 1] = int(tf[0]) doc_frequency[j - 1] = int(tf[1]) mini_batch.append_doc(doc_terms, doc_frequency) return mini_batch, end_file except Exception as inst: logging.error(inst)

https://:@github.com/adaptivescale/lxdui.git

fce2cbadebf5400fa109a7055fcf2059613c463d

@@ -48,7 +48,7 @@ def createContainer(): for container in input: client = LXCContainer(container) result.append(client.create()) - return response.reply(result, message='Container {} created successfully.'.format(input.get('name'))) + return response.reply(result, message='Container {} created successfully.'.format(container.get('name'))) except ValueError as ex: return response.reply(message=ex.__str__(), status=403)

app/api/controllers/container.py

ReplaceText(target='container' @(51,90)->(51,95))

def createContainer(): for container in input: client = LXCContainer(container) result.append(client.create()) return response.reply(result, message='Container {} created successfully.'.format(input.get('name'))) except ValueError as ex: return response.reply(message=ex.__str__(), status=403)

def createContainer(): for container in input: client = LXCContainer(container) result.append(client.create()) return response.reply(result, message='Container {} created successfully.'.format(container.get('name'))) except ValueError as ex: return response.reply(message=ex.__str__(), status=403)

https://:@github.com/desihub/desiutil.git

51e58e1174bb9bba78a3fbbe8491c2f6f4ae2d91

@@ -66,7 +66,7 @@ def setdep(header, name, version): verkey = 'DEPVER{:02d}'.format(i) if namekey in header: if header[namekey] == name: - header[namekey] = version + header[verkey] = version return else: continue

py/desiutil/depend.py

ReplaceText(target='verkey' @(69,23)->(69,30))

def setdep(header, name, version): verkey = 'DEPVER{:02d}'.format(i) if namekey in header: if header[namekey] == name: header[namekey] = version return else: continue

def setdep(header, name, version): verkey = 'DEPVER{:02d}'.format(i) if namekey in header: if header[namekey] == name: header[verkey] = version return else: continue

https://:@github.com/jmoiron/par2ools.git

74b8d8885c8ad90f5649a8eb8228c62a840c5f3a

@@ -75,7 +75,7 @@ class Par2File(object): else: self.contents = obj_or_path.read() if getattr(obj_or_path, 'name', None): - self.path = f.name + self.path = obj_or_path.name self.packets = self.read_packets() def read_packets(self):

par2ools/par2.py

ReplaceText(target='obj_or_path' @(78,28)->(78,29))

class Par2File(object): else: self.contents = obj_or_path.read() if getattr(obj_or_path, 'name', None): self.path = f.name self.packets = self.read_packets() def read_packets(self):

class Par2File(object): else: self.contents = obj_or_path.read() if getattr(obj_or_path, 'name', None): self.path = obj_or_path.name self.packets = self.read_packets() def read_packets(self):

https://:@github.com/futurecolors/django-cked.git

e61ce34219c69582f131dbd922763d0253c2ba83

@@ -33,7 +33,7 @@ def elfinder(request): 'dictionary type.') return render(request, 'cked/elfinder.html', { - 'options': json_encode(options), + 'options': json_encode(user_options), })

cked/views.py

ReplaceText(target='user_options' @(36,31)->(36,38))

def elfinder(request): 'dictionary type.') return render(request, 'cked/elfinder.html', { 'options': json_encode(options), })

def elfinder(request): 'dictionary type.') return render(request, 'cked/elfinder.html', { 'options': json_encode(user_options), })

https://:@github.com/divi255/bakauditor.git

4604cdef011cd2a4d5c4307704a69e1b87d0bb2f

@@ -12,7 +12,7 @@ def check(**kwargs): result.time = t result.size = size if 'min-size' in kwargs: - result.ok = size > kwargs.get('min-size') + result.ok = size >= kwargs.get('min-size') if not result.ok: result.err = 'Too small' else:

bakauditor/plugins/file.py

ReplaceText(target='>=' @(15,25)->(15,26))

def check(**kwargs): result.time = t result.size = size if 'min-size' in kwargs: result.ok = size > kwargs.get('min-size') if not result.ok: result.err = 'Too small' else:

def check(**kwargs): result.time = t result.size = size if 'min-size' in kwargs: result.ok = size >= kwargs.get('min-size') if not result.ok: result.err = 'Too small' else:

https://:@github.com/cwebber/xudd.git

69a387685cb87e3e9fd0a68f3161fe21e3eb60fb

@@ -139,7 +139,7 @@ class Hive(Thread): """ message_id = id or self.gen_message_id() message = Message( - to=to, directive=to, from_id=from_id, body=body, + to=to, directive=directive, from_id=from_id, body=body, in_reply_to=in_reply_to, id=message_id) self.hive_action_queue.put( ("queue_message", message))

xudd/hive.py

ReplaceText(target='directive' @(142,29)->(142,31))

class Hive(Thread): """ message_id = id or self.gen_message_id() message = Message( to=to, directive=to, from_id=from_id, body=body, in_reply_to=in_reply_to, id=message_id) self.hive_action_queue.put( ("queue_message", message))

class Hive(Thread): """ message_id = id or self.gen_message_id() message = Message( to=to, directive=directive, from_id=from_id, body=body, in_reply_to=in_reply_to, id=message_id) self.hive_action_queue.put( ("queue_message", message))

https://:@github.com/NotYetGames/po-excel-translate.git

5a50131472f50d15354df8a274395d69d8a937b5

@@ -219,7 +219,7 @@ def ConvertPoXls(): for (i, cat) in enumerate(catalogs): cat = cat[1] msg = cat.find(msgid) - if msgid is not None: + if msg is not None: if 'fuzzy' in msg.flags: sheet.write(row, column, msg.msgstr, italic_style) else:

lingua/xlsconvert.py

ReplaceText(target='msg' @(222,15)->(222,20))

def ConvertPoXls(): for (i, cat) in enumerate(catalogs): cat = cat[1] msg = cat.find(msgid) if msgid is not None: if 'fuzzy' in msg.flags: sheet.write(row, column, msg.msgstr, italic_style) else:

def ConvertPoXls(): for (i, cat) in enumerate(catalogs): cat = cat[1] msg = cat.find(msgid) if msg is not None: if 'fuzzy' in msg.flags: sheet.write(row, column, msg.msgstr, italic_style) else:

https://:@github.com/chen0040/pyalgs.git

52de8860e4a4e4fdde27c055064d1a4de5dd7074

@@ -13,7 +13,7 @@ class BinarySelection(object): hi = len(a) - 1 while lo <= hi: - mid = lo + (hi - lo) / 2 + mid = lo + (hi - lo) // 2 if less(x, a[mid]): hi = mid - 1 elif less(a[mid], x):

pyalgs/algorithms/commons/selecting.py

ReplaceText(target='//' @(16,33)->(16,34))

class BinarySelection(object): hi = len(a) - 1 while lo <= hi: mid = lo + (hi - lo) / 2 if less(x, a[mid]): hi = mid - 1 elif less(a[mid], x):

class BinarySelection(object): hi = len(a) - 1 while lo <= hi: mid = lo + (hi - lo) // 2 if less(x, a[mid]): hi = mid - 1 elif less(a[mid], x):

https://:@github.com/jvivian/rnaseq-lib.git

c72b002e39cd0a0646e3a4f228970e5078fecac6

@@ -75,7 +75,7 @@ class Holoview: :rtype: hv.Overlay """ # Subset dataframe by tissue and gene - df = self._subset(tissue, gene) + df = self._subset(gene, tissue) # Subset by dataset tumor, normal, gtex = subset_by_dataset(df)

src/rnaseq_lib/plot/__init__.py

ArgSwap(idxs=0<->1 @(78,13)->(78,25))

class Holoview: :rtype: hv.Overlay """ # Subset dataframe by tissue and gene df = self._subset(tissue, gene) # Subset by dataset tumor, normal, gtex = subset_by_dataset(df)

class Holoview: :rtype: hv.Overlay """ # Subset dataframe by tissue and gene df = self._subset(gene, tissue) # Subset by dataset tumor, normal, gtex = subset_by_dataset(df)

https://:@github.com/tylertrussell/gae-catnado.git

1c469d607226dec29e79b09d3b9a63fc6b558dee

@@ -33,4 +33,4 @@ class TestImmutableProperty(SimpleAppEngineTestCase): self.assertEqual(refetched_entity.name, NAME) with self.assertRaises(ImmutablePropertyException): - entity.name = 'anything' + refetched_entity.name = 'anything'

catnado/properties/test/test_immutable_property.py

ReplaceText(target='refetched_entity' @(36,6)->(36,12))

class TestImmutableProperty(SimpleAppEngineTestCase): self.assertEqual(refetched_entity.name, NAME) with self.assertRaises(ImmutablePropertyException): entity.name = 'anything'

class TestImmutableProperty(SimpleAppEngineTestCase): self.assertEqual(refetched_entity.name, NAME) with self.assertRaises(ImmutablePropertyException): refetched_entity.name = 'anything'

https://:@github.com/oscar-franzen/adobo.git

9c42ed1fad2799077765cb76d531c4218399ef66

@@ -183,7 +183,7 @@ https://oscar-franzen.github.io/adobo/adobo.html#adobo.normalize.norm') comp, contr = svd(data, ncomp) else: raise Exception('Unkown PCA method spefified. Valid choices are: irlb and svd') - obj.index = data.columns + comp.index = data.columns obj.norm_data[k]['dr']['pca'] = {'comp' : comp, 'contr' : contr, 'method' : method}

adobo/dr.py

ReplaceText(target='comp' @(186,8)->(186,11))

https://oscar-franzen.github.io/adobo/adobo.html#adobo.normalize.norm') comp, contr = svd(data, ncomp) else: raise Exception('Unkown PCA method spefified. Valid choices are: irlb and svd') obj.index = data.columns obj.norm_data[k]['dr']['pca'] = {'comp' : comp, 'contr' : contr, 'method' : method}

https://oscar-franzen.github.io/adobo/adobo.html#adobo.normalize.norm') comp, contr = svd(data, ncomp) else: raise Exception('Unkown PCA method spefified. Valid choices are: irlb and svd') comp.index = data.columns obj.norm_data[k]['dr']['pca'] = {'comp' : comp, 'contr' : contr, 'method' : method}

https://:@github.com/ngmarchant/oasis.git

3b39116447a4d3e4662790e357c257027d398435

@@ -62,7 +62,7 @@ def verify_consistency(predictions, scores, proba): def verify_unit_interval(value): """Throw an exception if the value is not on the unit interval [0,1]. """ - if not (value >= 0 or value <= 1): + if not (value >= 0 and value <= 1): raise ValueError("expected value on the interval [0, 1].") return value

oasis/input_verification.py

ReplaceText(target='and' @(65,23)->(65,25))

def verify_consistency(predictions, scores, proba): def verify_unit_interval(value): """Throw an exception if the value is not on the unit interval [0,1]. """ if not (value >= 0 or value <= 1): raise ValueError("expected value on the interval [0, 1].") return value

def verify_consistency(predictions, scores, proba): def verify_unit_interval(value): """Throw an exception if the value is not on the unit interval [0,1]. """ if not (value >= 0 and value <= 1): raise ValueError("expected value on the interval [0, 1].") return value

https://:@github.com/featurelabs/henchman.git

283c4812767a4d5b8701e2e7a0077343da8cec57

@@ -135,7 +135,7 @@ class Dendrogram(): self.graphs = templist def transform(self, df, n_feats=10): - assert df.shape[1] <= n_feats + assert df.shape[1] >= n_feats step = self.find_set_of_size(n_feats) return df[self.features_at_step(step)]

henchman/selection.py

ReplaceText(target='>=' @(138,27)->(138,29))

class Dendrogram(): self.graphs = templist def transform(self, df, n_feats=10): assert df.shape[1] <= n_feats step = self.find_set_of_size(n_feats) return df[self.features_at_step(step)]

class Dendrogram(): self.graphs = templist def transform(self, df, n_feats=10): assert df.shape[1] >= n_feats step = self.find_set_of_size(n_feats) return df[self.features_at_step(step)]

https://:@github.com/jackuoll/ultima-py.git

de0b3c0964cda0accc65e79e8b6b9c1e260d559f

@@ -53,7 +53,7 @@ class Gumps: copy = bitmap.copy() if hue: hue = (hue & 0x3FFF) - 1 - return Hues.HUES[hue].apply_to(bitmap, only_grey_pixels=partial_hue) + return Hues.HUES[hue].apply_to(copy, only_grey_pixels=partial_hue) return copy

ultimapy/sdk/gumps.py

ReplaceText(target='copy' @(56,43)->(56,49))

class Gumps: copy = bitmap.copy() if hue: hue = (hue & 0x3FFF) - 1 return Hues.HUES[hue].apply_to(bitmap, only_grey_pixels=partial_hue) return copy

class Gumps: copy = bitmap.copy() if hue: hue = (hue & 0x3FFF) - 1 return Hues.HUES[hue].apply_to(copy, only_grey_pixels=partial_hue) return copy

https://:@github.com/duguyue100/minesweeper.git

7d48ad6eb8e1d65b8e61f370e181e246443092f2

@@ -39,7 +39,7 @@ class MSGame(object): if (board_height <= 0): raise ValueError("the board height cannot be non-positive!") else: - self.board_height = board_width + self.board_height = board_height if (num_mines >= (board_width*board_height)): raise ValueError("The number of mines cannot be larger than "

minesweeper/msgame.py

ReplaceText(target='board_height' @(42,32)->(42,43))

class MSGame(object): if (board_height <= 0): raise ValueError("the board height cannot be non-positive!") else: self.board_height = board_width if (num_mines >= (board_width*board_height)): raise ValueError("The number of mines cannot be larger than "

class MSGame(object): if (board_height <= 0): raise ValueError("the board height cannot be non-positive!") else: self.board_height = board_height if (num_mines >= (board_width*board_height)): raise ValueError("The number of mines cannot be larger than "

https://:@github.com/duguyue100/minesweeper.git

e65fd9f5f46cb9c409746889d68d1e8cdc32876d

@@ -33,7 +33,7 @@ class MSBoard(object): if (board_height <= 0): raise ValueError("the board height cannot be non-positive!") else: - self.board_height = board_width + self.board_height = board_height if (num_mines >= (board_width*board_height)): raise ValueError("The number of mines cannot be larger than "

minesweeper/msboard.py

ReplaceText(target='board_height' @(36,32)->(36,43))

class MSBoard(object): if (board_height <= 0): raise ValueError("the board height cannot be non-positive!") else: self.board_height = board_width if (num_mines >= (board_width*board_height)): raise ValueError("The number of mines cannot be larger than "

class MSBoard(object): if (board_height <= 0): raise ValueError("the board height cannot be non-positive!") else: self.board_height = board_height if (num_mines >= (board_width*board_height)): raise ValueError("The number of mines cannot be larger than "

https://:@github.com/mtgreenway/python-openid.git

8b6d87a5a95552814265911c9d449932c39db768

@@ -90,7 +90,7 @@ class DiffieHelmanAssociator(object): 'openid.session_type':'DH-SHA1', 'openid.dh_modulus': to_b64(long2a(p)), 'openid.dh_gen': to_b64(long2a(g)), - 'openid.dh_consumer_public': to_b64(long2a(pow(p, priv_key, p))), + 'openid.dh_consumer_public': to_b64(long2a(pow(g, priv_key, p))), } body = urllib.urlencode(args)

association.py

ReplaceText(target='g' @(93,59)->(93,60))

class DiffieHelmanAssociator(object): 'openid.session_type':'DH-SHA1', 'openid.dh_modulus': to_b64(long2a(p)), 'openid.dh_gen': to_b64(long2a(g)), 'openid.dh_consumer_public': to_b64(long2a(pow(p, priv_key, p))), } body = urllib.urlencode(args)

class DiffieHelmanAssociator(object): 'openid.session_type':'DH-SHA1', 'openid.dh_modulus': to_b64(long2a(p)), 'openid.dh_gen': to_b64(long2a(g)), 'openid.dh_consumer_public': to_b64(long2a(pow(g, priv_key, p))), } body = urllib.urlencode(args)

https://:@github.com/hhuuggoo/kitchensink.git

752722df9109ca74a4fd321915e710eb7def9cb5

@@ -33,7 +33,7 @@ def make_app(redis_connection_obj, port, host_url, host_name, datadir): rpcblueprint.task_queue = TaskQueue(rpcblueprint.r) server_manager = Servers(rpcblueprint.r) settings.setup_server(rpcblueprint.r, datadir, host_url, host_name, - Catalog(rpcblueprint.r, datadir, host_url), + Catalog(rpcblueprint.r, datadir, host_name), server_manager ) rpcblueprint.heartbeat_thread = HeartbeatThread()

kitchensink/rpc/server.py

ReplaceText(target='host_name' @(36,59)->(36,67))

def make_app(redis_connection_obj, port, host_url, host_name, datadir): rpcblueprint.task_queue = TaskQueue(rpcblueprint.r) server_manager = Servers(rpcblueprint.r) settings.setup_server(rpcblueprint.r, datadir, host_url, host_name, Catalog(rpcblueprint.r, datadir, host_url), server_manager ) rpcblueprint.heartbeat_thread = HeartbeatThread()

def make_app(redis_connection_obj, port, host_url, host_name, datadir): rpcblueprint.task_queue = TaskQueue(rpcblueprint.r) server_manager = Servers(rpcblueprint.r) settings.setup_server(rpcblueprint.r, datadir, host_url, host_name, Catalog(rpcblueprint.r, datadir, host_name), server_manager ) rpcblueprint.heartbeat_thread = HeartbeatThread()

https://:@github.com/hhuuggoo/kitchensink.git

752722df9109ca74a4fd321915e710eb7def9cb5

@@ -45,7 +45,7 @@ def run(redis_connection, node_url, node_name, queue, datadir): db=redis_connection_obj['db']) server_manager = Servers(r) settings.setup_server(r, datadir, node_url, node_name, - Catalog(r, datadir, node_url), + Catalog(r, datadir, node_name), server_manager ) if queue is None:

kitchensink/scripts/start_worker.py

ReplaceText(target='node_name' @(48,46)->(48,54))

def run(redis_connection, node_url, node_name, queue, datadir): db=redis_connection_obj['db']) server_manager = Servers(r) settings.setup_server(r, datadir, node_url, node_name, Catalog(r, datadir, node_url), server_manager ) if queue is None:

def run(redis_connection, node_url, node_name, queue, datadir): db=redis_connection_obj['db']) server_manager = Servers(r) settings.setup_server(r, datadir, node_url, node_name, Catalog(r, datadir, node_name), server_manager ) if queue is None:

https://:@github.com/MPBA/pyphysio.git

a86854cc97f7c917f35d6cb424b1edc27e3167ee

@@ -317,7 +317,7 @@ class UnevenlySignal(Signal): if start_time is None: start_time = x_values[0] else: - assert start_time >= x_values[0], "More than one sample at or before start_time" + assert start_time <= x_values[0], "More than one sample at or before start_time" # WARN: limitation to 10 decimals due to workaround to prevent wrong cast flooring # (e.g. np.floor(0.29 * 100) == 28) x_values = _np.round((x_values - start_time) * sampling_freq, 10).astype(int)

pyphysio/Signal.py

ReplaceText(target='<=' @(320,34)->(320,36))

class UnevenlySignal(Signal): if start_time is None: start_time = x_values[0] else: assert start_time >= x_values[0], "More than one sample at or before start_time" # WARN: limitation to 10 decimals due to workaround to prevent wrong cast flooring # (e.g. np.floor(0.29 * 100) == 28) x_values = _np.round((x_values - start_time) * sampling_freq, 10).astype(int)

class UnevenlySignal(Signal): if start_time is None: start_time = x_values[0] else: assert start_time <= x_values[0], "More than one sample at or before start_time" # WARN: limitation to 10 decimals due to workaround to prevent wrong cast flooring # (e.g. np.floor(0.29 * 100) == 28) x_values = _np.round((x_values - start_time) * sampling_freq, 10).astype(int)

https://:@github.com/rhasspy/rhasspy-hermes.git

aec600af8dfa1112fdd20e0d2187b777e0f1799f

@@ -84,7 +84,7 @@ class NluIntent(Message): @classmethod def from_dict(cls, message_dict: typing.Dict[str, typing.Any]): """Construct message from dictionary.""" - message_dict = message_dict.only_fields(message_dict) + message_dict = cls.only_fields(message_dict) intent_dict = message_dict.pop("intent", {}) slot_dicts = message_dict.pop("slots", []) message = NluIntent( # type: ignore

rhasspyhermes/nlu.py

ReplaceText(target='cls' @(87,23)->(87,35))

class NluIntent(Message): @classmethod def from_dict(cls, message_dict: typing.Dict[str, typing.Any]): """Construct message from dictionary.""" message_dict = message_dict.only_fields(message_dict) intent_dict = message_dict.pop("intent", {}) slot_dicts = message_dict.pop("slots", []) message = NluIntent( # type: ignore

class NluIntent(Message): @classmethod def from_dict(cls, message_dict: typing.Dict[str, typing.Any]): """Construct message from dictionary.""" message_dict = cls.only_fields(message_dict) intent_dict = message_dict.pop("intent", {}) slot_dicts = message_dict.pop("slots", []) message = NluIntent( # type: ignore

https://:@github.com/alpacahq/alpaca-backtrader-api.git

f198c13c87b8736d0903498fbdb233310ef6f09c

@@ -469,7 +469,7 @@ class AlpacaStore(with_metaclass(MetaSingleton, object)): # (https://stackoverflow.com/a/1592837/2739124) cdl = cdl.loc[ pytz.timezone(NY).localize(dtbegin): - pytz.timezone(NY).localize(dtbegin) + pytz.timezone(NY).localize(dtend) ].dropna(subset=['high']) records = cdl.reset_index().to_dict('records') for r in records:

alpaca_backtrader_api/alpacastore.py

ReplaceText(target='dtend' @(472,41)->(472,48))

class AlpacaStore(with_metaclass(MetaSingleton, object)): # (https://stackoverflow.com/a/1592837/2739124) cdl = cdl.loc[ pytz.timezone(NY).localize(dtbegin): pytz.timezone(NY).localize(dtbegin) ].dropna(subset=['high']) records = cdl.reset_index().to_dict('records') for r in records:

class AlpacaStore(with_metaclass(MetaSingleton, object)): # (https://stackoverflow.com/a/1592837/2739124) cdl = cdl.loc[ pytz.timezone(NY).localize(dtbegin): pytz.timezone(NY).localize(dtend) ].dropna(subset=['high']) records = cdl.reset_index().to_dict('records') for r in records:

https://:@github.com/willforde/urlquick.git

3023fbbb7646f0e0dfb0393912720137f11165f7

@@ -854,7 +854,7 @@ class Session(CacheAdapter): reqParams = UnicodeDict(self._params, params) # Add cookies to headers - if reqCookies and not u"Cookie" in headers: + if reqCookies and not u"Cookie" in reqHeaders: header = u"; ".join([u"{}={}".format(key, value) for key, value in reqCookies.items()]) reqHeaders[u"Cookie"] = header

urlquick.py

ReplaceText(target='reqHeaders' @(857,43)->(857,50))

class Session(CacheAdapter): reqParams = UnicodeDict(self._params, params) # Add cookies to headers if reqCookies and not u"Cookie" in headers: header = u"; ".join([u"{}={}".format(key, value) for key, value in reqCookies.items()]) reqHeaders[u"Cookie"] = header

class Session(CacheAdapter): reqParams = UnicodeDict(self._params, params) # Add cookies to headers if reqCookies and not u"Cookie" in reqHeaders: header = u"; ".join([u"{}={}".format(key, value) for key, value in reqCookies.items()]) reqHeaders[u"Cookie"] = header

https://:@github.com/willforde/urlquick.git

d207cf47f7bf35163849f35f919a024b001a0f33

@@ -962,7 +962,7 @@ class Session(ConnectionManager): if req_cookies: logger.debug("Request cookies: %s", req_cookies) if json: - logger.debug("Request json: %s", req_cookies) + logger.debug("Request json: %s", json) if data: logger.debug("Request data: %s", data)

urlquick.py

ReplaceText(target='json' @(965,45)->(965,56))

class Session(ConnectionManager): if req_cookies: logger.debug("Request cookies: %s", req_cookies) if json: logger.debug("Request json: %s", req_cookies) if data: logger.debug("Request data: %s", data)

class Session(ConnectionManager): if req_cookies: logger.debug("Request cookies: %s", req_cookies) if json: logger.debug("Request json: %s", json) if data: logger.debug("Request data: %s", data)

https://:@github.com/dlukes/corpy.git

4bf35b8dd0ed5971bd05896adda646f4452e47a8

@@ -23,7 +23,7 @@ def print_position(lines, line_no): "represent the same corpus?" ) position.extend(line[1:]) - print("\t".join(line)) + print("\t".join(position)) @cli.command()

corpy/scripts/zip_verticals.py

ReplaceText(target='position' @(26,20)->(26,24))

def print_position(lines, line_no): "represent the same corpus?" ) position.extend(line[1:]) print("\t".join(line)) @cli.command()

def print_position(lines, line_no): "represent the same corpus?" ) position.extend(line[1:]) print("\t".join(position)) @cli.command()

https://:@github.com/steinitzu/humblebee.git

d95954f99098481ab17e935f63ca734dc8bdf519

@@ -50,7 +50,7 @@ def zero_prefix_int(num): strnum = str(num) if len(strnum) == 1: return '0'+strnum - return num + return strnum def timestamp(dt): return mktime(dt.timetuple())

src/tvunfucker/util.py

ReplaceText(target='strnum' @(53,11)->(53,14))

def zero_prefix_int(num): strnum = str(num) if len(strnum) == 1: return '0'+strnum return num def timestamp(dt): return mktime(dt.timetuple())

def zero_prefix_int(num): strnum = str(num) if len(strnum) == 1: return '0'+strnum return strnum def timestamp(dt): return mktime(dt.timetuple())

https://:@github.com/ramasrirama99/AlgoTradeFramework.git

011a70532972aa883c66bb9d4f32351bcc24a922

@@ -6,7 +6,7 @@ def chunks(l, n): n = max(1, n) step = int(len(l) / n) for i in range(0, len(l), step): - big_list.append(l[i:i+n]) + big_list.append(l[i:i+step]) return big_list

algotaf/backend/config.py

ReplaceText(target='step' @(9,30)->(9,31))

def chunks(l, n): n = max(1, n) step = int(len(l) / n) for i in range(0, len(l), step): big_list.append(l[i:i+n]) return big_list

def chunks(l, n): n = max(1, n) step = int(len(l) / n) for i in range(0, len(l), step): big_list.append(l[i:i+step]) return big_list

https://:@github.com/JonnyTran/OpenOmics.git

d49006c61b12a8013c9c1f4a12c5ff390980f9e3

@@ -454,7 +454,7 @@ class LncRNAExpression(GenomicData): if gene_name not in lnc_seq: lnc_seq[gene_name] = str(record.seq) else: - if len(lnc_seq[gene_name]) > len(str(record.seq)): + if len(lnc_seq[gene_name]) < len(str(record.seq)): lnc_seq[gene_name] = str(record.seq) # Multiple transcripts each lncRNA gene

TCGAMultiOmics/genomic.py

ReplaceText(target='<' @(457,43)->(457,44))

class LncRNAExpression(GenomicData): if gene_name not in lnc_seq: lnc_seq[gene_name] = str(record.seq) else: if len(lnc_seq[gene_name]) > len(str(record.seq)): lnc_seq[gene_name] = str(record.seq) # Multiple transcripts each lncRNA gene

class LncRNAExpression(GenomicData): if gene_name not in lnc_seq: lnc_seq[gene_name] = str(record.seq) else: if len(lnc_seq[gene_name]) < len(str(record.seq)): lnc_seq[gene_name] = str(record.seq) # Multiple transcripts each lncRNA gene

https://:@github.com/JonnyTran/OpenOmics.git

b034a1b50639f3d302e6da13280093662394b35d

@@ -95,7 +95,7 @@ class GeneOntology(Dataset): leaf_terms = self.get_child_terms() go_terms_parents = annotation.map( - lambda x: list({term for term in x if term not in leaf_terms}) \ + lambda x: list({term for term in x if term in leaf_terms}) \ if isinstance(x, list) else None) return go_terms_parents

openomics/database/ontology.py

ReplaceText(target=' in ' @(98,54)->(98,62))

class GeneOntology(Dataset): leaf_terms = self.get_child_terms() go_terms_parents = annotation.map( lambda x: list({term for term in x if term not in leaf_terms}) \ if isinstance(x, list) else None) return go_terms_parents

class GeneOntology(Dataset): leaf_terms = self.get_child_terms() go_terms_parents = annotation.map( lambda x: list({term for term in x if term in leaf_terms}) \ if isinstance(x, list) else None) return go_terms_parents

https://:@github.com/JonnyTran/OpenOmics.git

153599d5ce118fcd4c4fb6c44eba9c28fd762983

@@ -95,7 +95,7 @@ class GeneOntology(Dataset): leaf_terms = self.get_child_terms() go_terms_parents = annotation.map( - lambda x: list({term for term in x if term not in leaf_terms}) \ + lambda x: list({term for term in x if term in leaf_terms}) \ if isinstance(x, list) else None) return go_terms_parents

openomics/database/ontology.py

ReplaceText(target=' in ' @(98,54)->(98,62))

class GeneOntology(Dataset): leaf_terms = self.get_child_terms() go_terms_parents = annotation.map( lambda x: list({term for term in x if term not in leaf_terms}) \ if isinstance(x, list) else None) return go_terms_parents

class GeneOntology(Dataset): leaf_terms = self.get_child_terms() go_terms_parents = annotation.map( lambda x: list({term for term in x if term in leaf_terms}) \ if isinstance(x, list) else None) return go_terms_parents

https://:@github.com/jqb/django-settings.git

6b594eca70c7addfc9e1b30d8e91334da3c6254f

@@ -106,7 +106,7 @@ class DataAPI(object): # XXX: fix this mechanism def _set_cache_for(self, name, value): - self.get._cache_set(value, name) + self.get._cache_set(name, value) data = DataAPI()

django_settings/dataapi.py

ArgSwap(idxs=0<->1 @(109,8)->(109,27))

class DataAPI(object): # XXX: fix this mechanism def _set_cache_for(self, name, value): self.get._cache_set(value, name) data = DataAPI()

class DataAPI(object): # XXX: fix this mechanism def _set_cache_for(self, name, value): self.get._cache_set(name, value) data = DataAPI()

https://:@github.com/jqb/django-settings.git

72acf0e93c8b2a4bc8dd0c78fa1c703e63b7a26f

@@ -11,7 +11,7 @@ def initialize_data(sender, **kwargs): for name, type_name_and_value in DEFAULT_SETTINGS.items(): type_name, value = type_name_and_value - if not dataapi.data.exists(type_name): + if not dataapi.data.exists(name): dataapi.data.set(type_name, name, value) signals.post_syncdb.connect(initialize_data, sender=models)

django_settings/management.py

ReplaceText(target='name' @(14,35)->(14,44))

def initialize_data(sender, **kwargs): for name, type_name_and_value in DEFAULT_SETTINGS.items(): type_name, value = type_name_and_value if not dataapi.data.exists(type_name): dataapi.data.set(type_name, name, value) signals.post_syncdb.connect(initialize_data, sender=models)

def initialize_data(sender, **kwargs): for name, type_name_and_value in DEFAULT_SETTINGS.items(): type_name, value = type_name_and_value if not dataapi.data.exists(name): dataapi.data.set(type_name, name, value) signals.post_syncdb.connect(initialize_data, sender=models)

https://:@github.com/qutech/qtune.git

a6ca5b76c17a8092c67f2d495c7f422d038008f5

@@ -45,5 +45,5 @@ def find_lead_transition(data: np.ndarray, center: float, scan_range: float, npo y_red = np.absolute(y_red) max_index = int(np.argmax(y_red) + int(round(n / 2))) - return x_red[max_index] + return x[max_index]

qtune/util.py

ReplaceText(target='x' @(48,11)->(48,16))

def find_lead_transition(data: np.ndarray, center: float, scan_range: float, npo y_red = np.absolute(y_red) max_index = int(np.argmax(y_red) + int(round(n / 2))) return x_red[max_index]

def find_lead_transition(data: np.ndarray, center: float, scan_range: float, npo y_red = np.absolute(y_red) max_index = int(np.argmax(y_red) + int(round(n / 2))) return x[max_index]

https://:@github.com/qutech/qtune.git

b68e78b9da5d2150450fcda75d7266d388794caf

@@ -42,7 +42,7 @@ class SubsetTunerTest(unittest.TestCase): # assert that the solver is called with the right arguments self.assertEqual(solver.update_after_step.call_count, 1) - pd.testing.assert_series_equal(solver_voltages, solver.update_after_step.call_args[0][0]) + pd.testing.assert_series_equal(full_voltages, solver.update_after_step.call_args[0][0]) parameter = pd.Series(data=[10 * i for i in range(n_evaluator)], index=["parameter_" + str(i) for i in range(n_evaluator)])

tests/test_parameter_tuner.py

ReplaceText(target='full_voltages' @(45,39)->(45,54))

class SubsetTunerTest(unittest.TestCase): # assert that the solver is called with the right arguments self.assertEqual(solver.update_after_step.call_count, 1) pd.testing.assert_series_equal(solver_voltages, solver.update_after_step.call_args[0][0]) parameter = pd.Series(data=[10 * i for i in range(n_evaluator)], index=["parameter_" + str(i) for i in range(n_evaluator)])

class SubsetTunerTest(unittest.TestCase): # assert that the solver is called with the right arguments self.assertEqual(solver.update_after_step.call_count, 1) pd.testing.assert_series_equal(full_voltages, solver.update_after_step.call_args[0][0]) parameter = pd.Series(data=[10 * i for i in range(n_evaluator)], index=["parameter_" + str(i) for i in range(n_evaluator)])