Different preprocessing scheme
#4
by
TurquoiseA
- opened
Hi there, thanks for sharing your wonderful work! I have some questions about your preprocessing scheme. I noticed several differences between the original CT-CLIP preprocessing script and yours and hopefully you can help me understand. Here are some changes I noticed but please feel free to add if I missed anything!
- The spacing parameters here: https://huggingface.co/datasets/RadGenome/RadGenome-ChestCT/blob/main/processed_code/preprocess_ctrate_train.py#L104
- The addition of monai transformation: https://huggingface.co/datasets/RadGenome/RadGenome-ChestCT/blob/main/processed_code/preprocess_ctrate_train.py#L82
- An additional transpose to the axial view: https://huggingface.co/datasets/RadGenome/RadGenome-ChestCT/blob/main/processed_code/preprocess_ctrate_train.py#L119
- Exclusion of HU value scale setting.
Thanks again!
