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--- |
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language: |
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- de |
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bigbio_language: |
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- German |
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multilinguality: monolingual |
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pretty_name: GGPONC2 |
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homepage: https://www.leitlinienprogramm-onkologie.de/projekte/ggponc-english/ |
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bigbio_pubmed: false |
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bigbio_public: flase |
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bigbio_tasks: |
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- NAMED_ENTITY_RECOGNITION |
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--- |
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# Dataset Card for GGPONC2 |
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## Dataset Description |
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- **Homepage:** https://www.leitlinienprogramm-onkologie.de/projekte/ggponc-english/ |
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- **Pubmed:** False |
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- **Public:** False |
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- **Tasks:** NER |
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The GGPONC project aims to provide a freely distributable corpus of German medical text for NLP researchers. |
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Clinical guidelines are particularly suitable to create such corpora, as they contain no protected health information |
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(PHI), which distinguishes them from other kinds of medical text. |
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The second version of the corpus (GGPONC 2.0) consists of 30 German oncology guidelines with 1.87 million tokens. |
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It has been completely manually annotated on the entity level by 7 medical students using the INCEpTION platform over a |
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time frame of 6 months in more than 1200 hours of work. This makes GGPONC 2.0 the largest annotated, freely |
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distributable corpus of German medical text at the moment. |
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Annotated entities are Findings (Diagnosis / Pathology, Other Finding), Substances (Clinical Drug, Nutrients / Body |
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Substances, External Substances) and Procedures (Therapeutic, Diagnostic), as well as Specifications for these entities. |
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In total, annotators have created more than 200000 entity annotations. In addition, fragment relationships have been |
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annotated to explicitly indicate elliptical coordinated noun phrases, a common phenomenon in German text. |
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## Citation Information |
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``` |
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@inproceedings{borchert-etal-2022-ggponc, |
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title = "{GGPONC} 2.0 - The {G}erman Clinical Guideline Corpus for Oncology: Curation Workflow, Annotation Policy, Baseline {NER} Taggers", |
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author = "Borchert, Florian and |
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Lohr, Christina and |
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Modersohn, Luise and |
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Witt, Jonas and |
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Langer, Thomas and |
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Follmann, Markus and |
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Gietzelt, Matthias and |
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Arnrich, Bert and |
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Hahn, Udo and |
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Schapranow, Matthieu-P.", |
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booktitle = "Proceedings of the Thirteenth Language Resources and Evaluation Conference", |
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month = jun, |
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year = "2022", |
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address = "Marseille, France", |
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publisher = "European Language Resources Association", |
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url = "https://aclanthology.org/2022.lrec-1.389", |
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pages = "3650--3660", |
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} |
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``` |
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