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- complex_traits_all/AUPRC/maf_match/CADD.plus.RawScore.csv +2 -0
- complex_traits_all/AUPRC/maf_match/GPN-MSA_absLLR.plus.score.csv +2 -0
- complex_traits_all/AUPRC/maf_match_AND_no_cadd_overlap/CADD.plus.RawScore.csv +2 -0
- complex_traits_all/AUPRC/maf_match_AND_no_cadd_overlap/GPN-MSA_absLLR.plus.score.csv +2 -0
- complex_traits_all/features/CADD.parquet +3 -0
- complex_traits_all/features/CADDv1.7.RawScore.parquet +3 -0
- complex_traits_all/features/GPN-MSA_LLR.parquet +3 -0
- complex_traits_all/features/GPN-MSA_absLLR.parquet +3 -0
- complex_traits_all/preds/maf_match/CADD.plus.RawScore.parquet +3 -0
- complex_traits_all/preds/maf_match/GPN-MSA_absLLR.plus.score.parquet +3 -0
- complex_traits_all/preds/maf_match_AND_no_cadd_overlap/CADD.plus.RawScore.parquet +3 -0
- complex_traits_all/preds/maf_match_AND_no_cadd_overlap/GPN-MSA_absLLR.plus.score.parquet +3 -0
- complex_traits_all/subset/all.parquet +3 -0
- complex_traits_all/subset/maf_0.00_0.05.parquet +3 -0
- complex_traits_all/subset/maf_0.05_0.50.parquet +3 -0
- complex_traits_all/subset/maf_0.0_0.01.parquet +3 -0
- complex_traits_all/subset/maf_0.0_0.1.parquet +3 -0
- complex_traits_all/subset/maf_0.1_0.2.parquet +3 -0
- complex_traits_all/subset/maf_0.2_0.3.parquet +3 -0
- complex_traits_all/subset/maf_0.3_0.4.parquet +3 -0
- complex_traits_all/subset/maf_0.4_0.5.parquet +3 -0
- complex_traits_all/subset/maf_0_05_0.50.parquet +3 -0
- complex_traits_all/subset/maf_match.parquet +3 -0
- complex_traits_all/subset/maf_match_AND_no_cadd_overlap.parquet +3 -0
- complex_traits_all/subset/no_cadd_overlap.parquet +3 -0
- complex_traits_all/test.parquet +3 -0
- complex_traits_matched_9/features/Borzoi_L2.parquet +3 -0
- complex_traits_matched_9/features/Caduceus_Embeddings.parquet +3 -0
- complex_traits_matched_9/features/Enformer_L2.parquet +3 -0
- complex_traits_matched_9/features/GPN-MSA_Embeddings.parquet +3 -0
- complex_traits_matched_9/features/GPN_final_Embeddings.parquet +3 -0
- complex_traits_matched_9/features/GPN_final_InnerProducts.parquet +3 -0
- complex_traits_matched_9/features/HyenaDNA_Embeddings.parquet +3 -0
- complex_traits_matched_9/features/NucleotideTransformer_Embeddings.parquet +3 -0
- complex_traits_matched_9/features/NucleotideTransformer_InnerProducts.parquet +3 -0
- complex_traits_matched_9/preds/BMI/Borzoi.LogisticRegression.chrom.subset_from_all.parquet +3 -0
- complex_traits_matched_9/preds/BMI/Borzoi_L2_L2.plus.all.parquet +3 -0
- complex_traits_matched_9/preds/BMI/CADD+GPN-MSA+Borzoi.LogisticRegression.chrom.subset_from_all.parquet +3 -0
- complex_traits_matched_9/preds/BMI/GPN-MSA.LogisticRegression.chrom.subset_from_all.parquet +3 -0
- complex_traits_matched_9/preds/DVT/CADD.LogisticRegression.chrom.subset_from_all.parquet +3 -0
- complex_traits_matched_9/subset/3_prime_UTR_variant.parquet +3 -0
- complex_traits_matched_9/subset/5_prime_UTR_variant.parquet +3 -0
- complex_traits_matched_9/subset/AG.parquet +3 -0
- complex_traits_matched_9/subset/ALP.parquet +3 -0
- complex_traits_matched_9/subset/Alb.parquet +3 -0
- complex_traits_matched_9/subset/BMI.parquet +3 -0
- complex_traits_matched_9/subset/Balding_Type4.parquet +3 -0
- complex_traits_matched_9/subset/Ca.parquet +3 -0
- complex_traits_matched_9/subset/DVT.parquet +3 -0
- complex_traits_matched_9/subset/FEV1FVC.parquet +3 -0
complex_traits_all/AUPRC/maf_match/CADD.plus.RawScore.csv
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Model,AUPRC,se
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CADD.plus.RawScore,0.003922846484348831,0.0012017375050475572
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complex_traits_all/AUPRC/maf_match/GPN-MSA_absLLR.plus.score.csv
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Model,AUPRC,se
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GPN-MSA_absLLR.plus.score,0.0024267125857312614,0.0005426874903039551
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complex_traits_all/AUPRC/maf_match_AND_no_cadd_overlap/CADD.plus.RawScore.csv
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Model,AUPRC,se
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CADD.plus.RawScore,0.003921563414737854,0.0013701333797650947
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complex_traits_all/AUPRC/maf_match_AND_no_cadd_overlap/GPN-MSA_absLLR.plus.score.csv
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Model,AUPRC,se
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GPN-MSA_absLLR.plus.score,0.0024450232354369596,0.000682006859820721
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complex_traits_all/features/CADD.parquet
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complex_traits_matched_9/subset/AG.parquet
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complex_traits_matched_9/subset/ALP.parquet
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complex_traits_matched_9/subset/Alb.parquet
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complex_traits_matched_9/subset/BMI.parquet
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