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songlab
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TraitGym

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Subset (4)

complex_traits · 11.4k rows

Split (1)

test · 11.4k rows

chrom stringclasses 22 values	pos int64 99.5k 249M	ref stringclasses 4 values	alt stringclasses 4 values	pip float64 0 1	trait stringclasses 259 values	label bool 2 classes	maf float64 0 0.5	ld_score float64 1.53 628	consequence stringclasses 16 values	tss_dist int64 0 1.58M	match_group stringlengths 5 37
21	42,653,642	G	A	0		false	0.35919	58.157	5_prime_UTR_variant	20	5_prime_UTR_variant_32
21	43,195,762	T	A	0		false	0.1353	29.367	dELS_flank	25,605	dELS_flank_103
21	43,196,773	A	G	0		false	0.14334	28.322	dELS_flank	26,616	dELS_flank_103
21	43,197,919	C	G	0		false	0.14323	28.332	dELS_flank	27,762	dELS_flank_103
21	43,921,965	G	A	0		false	0.25462	130.49	pELS_flank	3,042	pELS_flank_22
21	43,921,973	G	T	0		false	0.25486	130.41	pELS_flank	3,034	pELS_flank_22
21	43,922,040	T	C	0		false	0.2545	130.53	pELS_flank	2,967	pELS_flank_22
21	44,240,952	C	A	0.999983	Eosino	true	0.43079	49.804	5_prime_UTR_variant	0	5_prime_UTR_variant_32
21	44,710,082	C	T	0		false	0.29196	26.469	pELS	1,489	pELS_63
21	44,928,849	A	T	0		false	0.4919	40.145	5_prime_UTR_variant	10	5_prime_UTR_variant_32
21	44,995,333	C	T	0.000599		false	0.048131	21.103	pELS	55,303	pELS_64
21	45,004,125	A	G	0		false	0.17089	41.088	PLS_flank	64,095	PLS_flank_7
21	45,342,475	A	G	0		false	0.16416	52.457	PLS_flank	54,576	PLS_flank_7
21	45,405,808	C	G	0		false	0.32092	37.489	pELS	642	pELS_63
21	45,497,868	A	G	0		false	0.34135	61.833	dELS_flank	7,489	dELS_flank_102
21	45,534,429	T	C	0		false	0.25009	60.3	pELS	276	pELS_65
21	46,056,441	G	A	0		false	0.16323	62.286	PLS_flank	41,670	PLS_flank_7
21	46,056,443	G	A	0		false	0.12956	52.595	PLS_flank	41,668	PLS_flank_7
21	46,095,731	T	C	0		false	0.24286	45.231	pELS	2,380	pELS_65
21	46,153,555	G	A	0		false	0.24819	54.072	pELS	2,011	pELS_65
22	17,014,352	T	C	0		false	0.027155	17.432	pELS_flank	6,129	pELS_flank_24
22	17,035,044	G	A	0		false	0.008547	7.3152	pELS_flank	26,821	pELS_flank_23
22	17,035,157	A	G	0.988357	Mono	true	0.016436	14.33	pELS_flank	26,934	pELS_flank_23
22	17,076,156	G	A	1	Eosino,Mono	true	0.026204	19.424	dELS_flank	8,843	dELS_flank_104
22	17,201,971	T	C	0		false	0.039629	13.162	pELS_flank	2,187	pELS_flank_26
22	17,347,182	A	T	0		false	0.46142	14.122	dELS	12,766	dELS_203
22	17,363,498	G	C	1	Mono	true	0.001437	4.4786	dELS_flank	3,548	dELS_flank_105
22	17,371,469	C	T	0		false	0.049855	22.818	pELS_flank	2,008	pELS_flank_25
22	17,380,103	C	T	0		false	0.053733	22.028	dELS	10,642	dELS_202
22	17,476,920	G	C	0		false	0.086225	49.592	PLS	172	PLS_21
22	17,571,718	G	A	0.003658		false	0.02574	21.885	pELS_flank	8,219	pELS_flank_24
22	17,628,665	T	C	0.000865		false	0.31993	212.4	5_prime_UTR_variant	67	5_prime_UTR_variant_33
22	17,769,676	G	A	0.99928	Plt	true	0.006893	8.1368	dELS	4,339	dELS_200
22	17,770,125	C	T	0		false	0.001756	4.7195	dELS_flank	3,890	dELS_flank_105
22	17,785,684	G	A	0		false	0.44329	23.406	dELS	11,018	dELS_203
22	17,892,301	G	A	0		false	0.002051	9.6904	dELS	2,986	dELS_207
22	17,911,471	C	T	0.00081		false	0.006315	7.4511	dELS	4,596	dELS_200
22	18,031,372	C	T	0		false	0.030645	23.891	pELS_flank	6,810	pELS_flank_24
22	18,062,621	G	A	0.003478		false	0.46383	25.539	dELS	15,301	dELS_203
22	19,122,251	A	G	0		false	0.41569	231.58	5_prime_UTR_variant	160	5_prime_UTR_variant_33
22	19,122,299	A	G	0		false	0.41579	231.75	5_prime_UTR_variant	112	5_prime_UTR_variant_33
22	19,479,706	T	G	0.001599		false	0.032143	70.489	PLS	119	PLS_20
22	19,691,780	G	A	0.999608	eBMD	true	0.10793	39.439	dELS	22,722	dELS_201
22	19,739,466	C	A	0		false	0.44547	13.92	dELS	15,926	dELS_203
22	19,774,983	G	A	0.000527		false	0.17094	45.871	dELS_flank	14,204	dELS_flank_107
22	19,787,764	A	G	0		false	0.33628	65.913	3_prime_UTR_variant	26,985	3_prime_UTR_variant_40
22	19,947,744	A	G	0		false	0.00297	9.0616	dELS	3,197	dELS_207
22	19,959,374	A	C	0		false	0.16206	45.014	dELS	3,195	dELS_208
22	19,983,079	G	A	0		false	0.005383	7.7422	dELS	4,013	dELS_200
22	20,094,329	T	C	0.002541		false	0.49516	101.84	dELS	8,506	dELS_206
22	20,117,705	G	A	0.001038		false	0.025123	74.841	PLS	76	PLS_20
22	20,117,706	C	T	0.001038		false	0.025123	74.841	PLS	75	PLS_20
22	20,268,458	G	A	0.002044		false	0.31059	33.022	PLS	139	PLS_19
22	20,317,184	G	T	0.001822		false	0.040794	9.5384	pELS_flank	2,824	pELS_flank_26
22	20,430,343	C	A	0		false	0.16981	36.161	dELS	7,481	dELS_208
22	20,805,560	C	T	0		false	0.13238	163.39	dELS_flank	26,378	dELS_flank_108
22	21,003,838	G	A	0.000546		false	0.034068	13.081	pELS_flank	1,641	pELS_flank_26
22	21,010,925	C	G	0.000506		false	0.026745	17.003	pELS_flank	4,239	pELS_flank_24
22	21,023,045	C	T	0		false	0.063135	26.993	dELS	7,874	dELS_202
22	21,027,800	G	C	0		false	0.006502	16.366	3_prime_UTR_variant	4,748	3_prime_UTR_variant_39
22	21,032,395	C	T	0		false	0.33736	34.961	PLS	153	PLS_19
22	21,457,702	C	T	0.957316	ALP	true	0.060951	24.453	dELS	9,616	dELS_202
22	21,725,715	G	A	0.001355		false	0.16048	45.56	dELS_flank	10,039	dELS_flank_107
22	22,244,470	A	G	0		false	0.3658	121.57	pELS	309	pELS_66
22	22,520,464	G	C	0		false	0.31639	43.514	PLS	193	PLS_19
22	22,916,350	C	G	0.000559		false	0.026096	18.826	pELS_flank	28,520	pELS_flank_23
22	23,183,257	G	A	0		false	0.002885	9.2253	dELS	2,747	dELS_207
22	23,578,136	C	T	0		false	0.067321	28.979	pELS_flank	2,102	pELS_flank_25
22	23,584,880	T	C	0		false	0.026482	14.138	pELS_flank	4,577	pELS_flank_24
22	23,608,459	A	G	0		false	0.34147	56.875	3_prime_UTR_variant	23,563	3_prime_UTR_variant_40
22	23,754,081	G	T	0		false	0.36324	91.364	pELS	327	pELS_66
22	23,842,741	C	A	0		false	0.007165	8.8953	dELS	3,728	dELS_200
22	24,124,408	A	G	0		false	0.11815	158.14	dELS_flank	31,429	dELS_flank_108
22	24,191,335	G	A	0		false	0.17175	42.569	dELS_flank	9,847	dELS_flank_107
22	24,216,944	C	T	0		false	0.064646	27.17	dELS	9,167	dELS_202
22	24,362,877	T	G	0		false	0.003672	12.911	intron_variant	58,480	intron_variant_122
22	24,589,032	C	T	1	GGT	true	0.005561	17.115	3_prime_UTR_variant	4,040	3_prime_UTR_variant_39
22	24,633,815	A	C	0.979933	GGT	true	0.031847	18.131	pELS_flank	6,370	pELS_flank_24
22	24,775,912	A	G	0		false	0.35536	111.09	pELS	1,191	pELS_66
22	24,776,150	C	G	0		false	0.3554	111.09	pELS	1,429	pELS_66
22	25,215,705	A	G	0		false	0.37404	56.387	intron_variant	3,140	intron_variant_123
22	25,215,707	G	A	0		false	0.37414	56.461	intron_variant	3,142	intron_variant_123
22	25,546,456	T	G	0		false	0.17035	44.583	dELS_flank	18,218	dELS_flank_107
22	25,741,906	C	T	0		false	0.27567	38.229	PLS	237	PLS_19
22	25,942,973	T	C	0		false	0.43139	25.281	dELS	12,341	dELS_203
22	25,943,522	C	T	0		false	0.42965	25.255	dELS	11,792	dELS_203
22	26,289,019	T	C	0		false	0.000997	4.2302	dELS_flank	3,231	dELS_flank_105
22	26,429,116	C	G	0		false	0.05606	69.005	PLS	143	PLS_21
22	26,500,925	C	G	0		false	0.48211	99.953	dELS	5,406	dELS_206
22	26,618,503	C	T	0		false	0.37066	95.954	pELS	475	pELS_66
22	26,647,529	G	T	0		false	0.008263	12.777	pELS_flank	25,565	pELS_flank_23
22	26,647,935	G	T	0		false	0.00456	18.023	pELS_flank	25,971	pELS_flank_23
22	27,143,781	C	T	0		false	0.44346	28.723	intron_variant	521,817	intron_variant_124
22	27,785,411	C	T	0.998202	MCH	true	0.44589	20.408	dELS	16,344	dELS_203
22	27,792,230	G	A	0		false	0.026793	20.889	dELS_flank	9,525	dELS_flank_104
22	27,793,183	C	T	0		false	0.026592	21.258	dELS_flank	8,572	dELS_flank_104
22	27,862,202	G	A	0		false	0.003488	11.451	intron_variant	56,996	intron_variant_122
22	28,365,160	C	T	1	Age_at_Menopause,BrC,Lym,Neutro,WBC	true	0.002936	11.324	intron_variant	58,514	intron_variant_122
22	28,827,654	A	G	0.007954		false	0.29719	363.01	dELS	27,056	dELS_205
22	28,829,512	G	A	0.006981		false	0.29719	363.03	dELS	28,914	dELS_205

Subsets and Splits