metadata
language:
- en
thumbnail: https://www.onebraveidea.org/wp-content/uploads/2019/07/OBI-Logo-Website.png
tags:
- deidentification
- medical notes
datasets:
- I2B2
metrics:
- F1
- Recall
- AUC
widget:
- text: >-
Physician Discharge Summary Admit date: 10/12/1982 Discharge date:
10/22/1982 Patient Information Jack Smith, 54 y.o. male (DOB = 1/21/1928).
- text: >-
Home Address: 123 Park Drive, San Diego, CA, 03245. Home Phone:
202-555-0199 (home).
- text: >-
Hospital Care Team Service: Orthopedics Inpatient Attending: Roger C
Kelly, MD Attending phys phone: (634)743-5135 Discharge Unit: HCS843
Primary Care Physician: Hassan V Kim, MD 512-832-5025.
BERT-based deidentification model
This repo contains model weights for clinical note de-deidentification trained on the I2B2 dataset. Note that the hosted inference API uses a different tokenizer than what we developed for this task. Please see OBI EHR deidentification for more details and how to get started.