ClinicalTrialV3 / environment.yml
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name: gradio
channels:
- conda-forge
dependencies:
- aiofiles=23.2.1
- altair=5.3.0
- annotated-types=0.7.0
- anyio=4.3.0
- aom=3.9.0
- appnope=0.1.4
- argon2-cffi=23.1.0
- argon2-cffi-bindings=21.2.0
- arrow=1.3.0
- asttokens=2.4.1
- async-lru=2.0.4
- attrs=23.2.0
- babel=2.14.0
- beautifulsoup4=4.12.3
- bleach=6.1.0
- blinker=1.8.2
- brotli=1.1.0
- brotli-bin=1.1.0
- brotli-python=1.1.0
- bzip2=1.0.8
- ca-certificates=2024.8.30
- cached-property=1.5.2
- cached_property=1.5.2
- cairo=1.18.0
- certifi=2024.8.30
- cffi=1.16.0
- charset-normalizer=3.3.2
- click=8.1.7
- colorama=0.4.6
- comm=0.2.2
- contourpy=1.2.1
- cycler=0.12.1
- dav1d=1.2.1
- debugpy=1.8.1
- decorator=5.1.1
- defusedxml=0.7.1
- dnspython=2.6.1
- email-validator=2.1.1
- email_validator=2.1.1
- entrypoints=0.4
- exceptiongroup=1.2.0
- executing=2.0.1
- expat=2.6.2
- fastapi-cli=0.0.4
- ffmpeg=7.0.1
- ffmpy=0.3.0
- filelock=3.14.0
- flask=3.0.3
- font-ttf-dejavu-sans-mono=2.37
- font-ttf-inconsolata=3.000
- font-ttf-source-code-pro=2.038
- font-ttf-ubuntu=0.83
- fontconfig=2.14.2
- fonts-conda-ecosystem=1
- fonts-conda-forge=1
- fonttools=4.53.0
- fqdn=1.5.1
- freetype=2.12.1
- fribidi=1.0.10
- fsspec=2024.6.0
- gettext=0.22.5
- gettext-tools=0.22.5
- gmp=6.3.0
- gnutls=3.7.9
- graphite2=1.3.13
- h11=0.14.0
- harfbuzz=8.5.0
- icu=73.2
- importlib-metadata=7.1.0
- importlib-resources=6.4.0
- importlib_metadata=7.1.0
- importlib_resources=6.4.0
- ipykernel=6.29.3
- ipython=8.25.0
- ipywidgets=8.1.3
- isoduration=20.11.0
- itsdangerous=2.2.0
- jedi=0.19.1
- jinja2=3.1.4
- joblib=1.4.2
- json5=0.9.25
- jsonpointer=2.4
- jsonschema=4.22.0
- jsonschema-specifications=2023.12.1
- jsonschema-with-format-nongpl=4.22.0
- jupyter=1.1.1
- jupyter-lsp=2.2.5
- jupyter_client=8.6.2
- jupyter_console=6.6.3
- jupyter_core=5.7.2
- jupyter_events=0.10.0
- jupyter_server=2.14.1
- jupyter_server_terminals=0.5.3
- jupyterlab=4.2.5
- jupyterlab_pygments=0.3.0
- jupyterlab_server=2.27.2
- jupyterlab_widgets=3.0.11
- kiwisolver=1.4.5
- krb5=1.21.2
- lame=3.100
- lcms2=2.16
- lerc=4.0.0
- libabseil=20240116.2
- libasprintf=0.22.5
- libasprintf-devel=0.22.5
- libass=0.17.1
- libblas=3.9.0
- libbrotlicommon=1.1.0
- libbrotlidec=1.1.0
- libbrotlienc=1.1.0
- libcblas=3.9.0
- libcxx=17.0.6
- libdeflate=1.20
- libedit=3.1.20191231
- libexpat=2.6.2
- libffi=3.4.2
- libgettextpo=0.22.5
- libgettextpo-devel=0.22.5
- libgfortran=5.0.0
- libgfortran5=13.2.0
- libglib=2.80.2
- libhwloc=2.10.0
- libiconv=1.17
- libidn2=2.3.7
- libintl=0.22.5
- libintl-devel=0.22.5
- libjpeg-turbo=3.0.0
- liblapack=3.9.0
- libopenblas=0.3.27
- libopenvino=2024.1.0
- libopenvino-arm-cpu-plugin=2024.1.0
- libopenvino-auto-batch-plugin=2024.1.0
- libopenvino-auto-plugin=2024.1.0
- libopenvino-hetero-plugin=2024.1.0
- libopenvino-ir-frontend=2024.1.0
- libopenvino-onnx-frontend=2024.1.0
- libopenvino-paddle-frontend=2024.1.0
- libopenvino-pytorch-frontend=2024.1.0
- libopenvino-tensorflow-frontend=2024.1.0
- libopenvino-tensorflow-lite-frontend=2024.1.0
- libopus=1.3.1
- libpng=1.6.43
- libprotobuf=4.25.3
- libsodium=1.0.18
- libsqlite=3.45.3
- libtasn1=4.19.0
- libtiff=4.6.0
- libunistring=0.9.10
- libvpx=1.14.0
- libwebp-base=1.4.0
- libxcb=1.15
- libxml2=2.12.7
- libzlib=1.3.1
- llvm-openmp=18.1.6
- markdown-it-py=3.0.0
- markupsafe=2.1.5
- matplotlib=3.8.4
- matplotlib-base=3.8.4
- matplotlib-inline=0.1.7
- mdurl=0.1.2
- mistune=3.0.2
- munkres=1.1.4
- natsort=8.4.0
- nbclient=0.10.0
- nbconvert=7.16.4
- nbconvert-core=7.16.4
- nbconvert-pandoc=7.16.4
- nbformat=5.10.4
- ncurses=6.5
- nest-asyncio=1.6.0
- nettle=3.9.1
- notebook=7.2.0
- notebook-shim=0.2.4
- numpy=1.26.4
- openh264=2.4.1
- openjpeg=2.5.2
- openssl=3.3.2
- orjson=3.10.3
- overrides=7.7.0
- p11-kit=0.24.1
- packaging=24.1
- pandas=2.2.3
- pandoc=3.2.1
- pandocfilters=1.5.0
- parso=0.8.4
- patsy=0.5.6
- pcre2=10.43
- pexpect=4.9.0
- pickleshare=0.7.5
- pillow=10.3.0
- pip=24.0
- pixman=0.43.4
- pkgutil-resolve-name=1.3.10
- platformdirs=4.2.2
- prometheus_client=0.20.0
- prompt-toolkit=3.0.42
- prompt_toolkit=3.0.42
- psutil=5.9.8
- pthread-stubs=0.4
- ptyprocess=0.7.0
- pugixml=1.14
- pure_eval=0.2.2
- pycparser=2.22
- pydantic=2.9.2
- pydantic-core=2.23.4
- pydub=0.25.1
- pygments=2.18.0
- pyobjc-core=10.2
- pyobjc-framework-cocoa=10.2
- pyparsing=3.1.2
- pysocks=1.7.1
- python=3.12.3
- python-dateutil=2.9.0
- python-fastjsonschema=2.19.1
- python-json-logger=2.0.7
- python-multipart=0.0.9
- python-tzdata=2024.1
- python_abi=3.12
- pytz=2024.1
- pyyaml=6.0.1
- pyzmq=26.0.3
- qtconsole-base=5.5.2
- qtpy=2.4.1
- readline=8.2
- referencing=0.35.1
- requests=2.32.3
- rfc3339-validator=0.1.4
- rfc3986-validator=0.1.1
- rich=13.7.1
- rpds-py=0.18.1
- ruff=0.4.7
- scikit-learn=1.5.2
- scipy=1.13.1
- seaborn=0.13.2
- seaborn-base=0.13.2
- semantic_version=2.10.0
- send2trash=1.8.3
- setuptools=70.0.0
- shellingham=1.5.4
- six=1.16.0
- snappy=1.2.0
- sniffio=1.3.1
- soupsieve=2.5
- stack_data=0.6.2
- statsmodels=0.14.2
- svt-av1=2.1.0
- tbb=2021.12.0
- terminado=0.18.1
- threadpoolctl=3.5.0
- tinycss2=1.3.0
- tk=8.6.13
- tomli=2.0.1
- tomlkit=0.12.0
- toolz=0.12.1
- tornado=6.4.1
- tqdm=4.66.4
- traitlets=5.14.3
- typer=0.12.3
- typer-slim=0.12.3
- typer-slim-standard=0.12.3
- types-python-dateutil=2.9.0.20240316
- typing-extensions=4.12.1
- typing_extensions=4.12.1
- typing_utils=0.1.0
- tzdata=2024a
- ujson=5.10.0
- uri-template=1.3.0
- urllib3=2.2.1
- uvicorn=0.30.1
- wcwidth=0.2.13
- webcolors=1.13
- webencodings=0.5.1
- websocket-client=1.8.0
- websockets=11.0.3
- werkzeug=3.0.3
- wheel=0.43.0
- widgetsnbextension=4.0.11
- wikipedia=1.4.0
- wtforms=3.1.2
- x264=1!164.3095
- x265=3.5
- xorg-libxau=1.0.11
- xorg-libxdmcp=1.1.3
- xz=5.2.6
- yaml=0.2.5
- zeromq=4.3.5
- zipp=3.17.0
- zlib=1.3.1
- zstd=1.5.6
- pip:
- aiohappyeyeballs==2.4.3
- aiohttp==3.10.9
- aiosignal==1.3.1
- asgiref==3.8.1
- backoff==2.2.1
- bcrypt==4.2.0
- bio==1.7.1
- biopython==1.84
- biothings-client==0.3.1
- build==1.2.2.post1
- cachetools==5.5.0
- chardet==3.0.4
- chroma-hnswlib==0.7.6
- chromadb==0.5.11
- coloredlogs==15.0.1
- dataclasses-json==0.6.7
- deprecated==1.2.14
- dirtyjson==1.0.8
- diskcache==5.6.3
- distro==1.9.0
- durationpy==0.9
- fastapi==0.115.3
- flatbuffers==24.3.25
- frozenlist==1.4.1
- google-auth==2.35.0
- googleapis-common-protos==1.65.0
- googletrans==3.1.0a0
- gprofiler-official==1.0.0
- gradio==5.3.0
- gradio-client==1.4.2
- greenlet==3.1.1
- groq==0.11.0
- grpcio==1.66.2
- h2==3.2.0
- hpack==3.0.0
- hstspreload==2024.10.1
- httpcore==1.0.6
- httptools==0.6.1
- httpx==0.27.2
- huggingface-hub==0.26.1
- humanfriendly==10.0
- hyperframe==5.2.0
- idna==2.10
- inquirerpy==0.3.4
- jiter==0.5.0
- jsonpatch==1.33
- kubernetes==31.0.0
- langchain==0.3.2
- langchain-community==0.3.1
- langchain-core==0.3.9
- langchain-experimental==0.3.2
- langchain-groq==0.2.0
- langchain-openai==0.2.2
- langchain-text-splitters==0.3.0
- langchainhub==0.1.21
- langgraph==0.2.34
- langgraph-checkpoint==2.0.1
- langsmith==0.1.131
- llama-cloud==0.1.4
- llama-cpp-python==0.2.90
- llama-index==0.11.20
- llama-index-agent-openai==0.3.4
- llama-index-cli==0.3.1
- llama-index-core==0.11.20
- llama-index-embeddings-openai==0.2.5
- llama-index-indices-managed-llama-cloud==0.4.0
- llama-index-legacy==0.9.48.post3
- llama-index-llms-groq==0.2.0
- llama-index-llms-llama-cpp==0.2.3
- llama-index-llms-openai==0.2.16
- llama-index-llms-openai-like==0.2.0
- llama-index-multi-modal-llms-openai==0.2.3
- llama-index-program-openai==0.2.0
- llama-index-question-gen-openai==0.2.0
- llama-index-readers-file==0.2.2
- llama-index-readers-llama-parse==0.3.0
- llama-parse==0.5.12
- llamaindex-py-client==0.1.19
- marshmallow==3.22.0
- mmh3==5.0.1
- monotonic==1.6
- mpmath==1.3.0
- msgpack==1.1.0
- multidict==6.1.0
- mygene==3.2.2
- mypy-extensions==1.0.0
- networkx==3.3
- nltk==3.9.1
- oauthlib==3.2.2
- onnxruntime==1.19.2
- openai==1.51.0
- opentelemetry-api==1.27.0
- opentelemetry-exporter-otlp-proto-common==1.27.0
- opentelemetry-exporter-otlp-proto-grpc==1.27.0
- opentelemetry-instrumentation==0.48b0
- opentelemetry-instrumentation-asgi==0.48b0
- opentelemetry-instrumentation-fastapi==0.48b0
- opentelemetry-proto==1.27.0
- opentelemetry-sdk==1.27.0
- opentelemetry-semantic-conventions==0.48b0
- opentelemetry-util-http==0.48b0
- outcome==1.3.0.post0
- pfzy==0.3.4
- pooch==1.8.2
- posthog==3.7.0
- protobuf==4.25.5
- pyasn1==0.6.1
- pyasn1-modules==0.4.1
- pydantic-settings==2.5.2
- pypdf==4.3.1
- pypika==0.48.9
- pyproject-hooks==1.2.0
- python-dotenv==1.0.1
- regex==2024.9.11
- requests-oauthlib==2.0.0
- requests-toolbelt==1.0.0
- rfc3986==1.5.0
- rsa==4.9
- safetensors==0.4.5
- selenium==4.27.0
- sentence-transformers==3.1.1
- sortedcontainers==2.4.0
- sqlalchemy==2.0.35
- starlette==0.41.0
- striprtf==0.0.26
- sympy==1.13.3
- tavily-python==0.5.0
- tenacity==8.5.0
- tiktoken==0.8.0
- tokenizers==0.20.0
- torch==2.4.1
- transformers==4.45.1
- trio==0.27.0
- trio-websocket==0.11.1
- types-requests==2.32.0.20240914
- typing-inspect==0.9.0
- uvloop==0.20.0
- watchfiles==0.24.0
- webdriver-manager==4.0.2
- wrapt==1.16.0
- wsproto==1.2.0
- yarl==1.13.1
prefix: /Users/satoc/miniforge3/envs/gradio