Datasets:
Add dataloader for full SourceData (including entity links)
#4
by
davidkartchner
- opened
Changes:
- Updates LATEST version to 2.0.3
- Includes dataloader for full, original dataset (organized by figure). This is specified under the
FULL
config - Add link to citation of paper on Arxiv
Unit Tests:
New Config
Ran the dataloader after adding the following to the bottom of the script:
if __name__ == "__main__":
from datasets import load_dataset
load_dataset(__file__, name="FULL")
Note that this same dataloader was implemented in BigBio (see this PR) and passed all of the unit tests on that repo as well.
Old Configs
Ran all old configs and each loaded successfully. Used the following code at the bottom of the file
if __name__ == "__main__":
from datasets import load_dataset
# Load NER
ds = load_dataset("EMBO/SourceData", "NER", version="2.0.3")
# Load PANELIZATION
ds = load_dataset("EMBO/SourceData", "PANELIZATION", version="2.0.3")
# Load GENEPROD ROLES
ds = load_dataset("EMBO/SourceData", "ROLES_GP", version="2.0.3")
# Load SMALL MOLECULE ROLES
ds = load_dataset("EMBO/SourceData", "ROLES_SM", version="2.0.3")
# Load MULTI ROLES
ds = load_dataset("EMBO/SourceData", "ROLES_MULTI", version="2.0.3")
drAbreu
changed pull request status to
merged