Commit
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4f5405b
1
Parent(s):
d85246d
Correctly parse conglomerate entity normalizations (#2)
Browse files- Correctly parse conglomerate entity normalizations (4022937ab8de8ce503b8570fe8527c092acac8f4)
Co-authored-by: David Kartchner <davidkartchner@users.noreply.huggingface.co>
- ncbi_disease.py +13 -1
ncbi_disease.py
CHANGED
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@@ -238,8 +238,20 @@ class NCBIDiseaseDataset(datasets.GeneratorBasedBuilder):
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normalized.append(
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{"db_name": "OMIM", "db_id": x.strip().split(":")[-1]}
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)
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else:
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-
normalized.append(
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unified_entities.append(
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{
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normalized.append(
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{"db_name": "OMIM", "db_id": x.strip().split(":")[-1]}
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)
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+
elif "+" in x:
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+
normalized.extend(
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[
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{
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"db_name": "MESH",
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"db_id": y.split(":")[-1].strip(),
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}
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for y in x.split("+")
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]
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)
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else:
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normalized.append(
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{"db_name": "MESH", "db_id": x.split(":")[-1].strip()}
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unified_entities.append(
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{
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