Datasets:

songlab
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TraitGym

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Subset (4)

complex_traits · 11.4k rows

Split (1)

test · 11.4k rows

chrom stringclasses 22 values	pos int64 99.5k 249M	ref stringclasses 4 values	alt stringclasses 4 values	pip float64 0 1	trait stringclasses 259 values	label bool 2 classes	maf float64 0 0.5	ld_score float64 1.53 628	consequence stringclasses 16 values	tss_dist int64 0 1.58M	match_group stringlengths 5 37
1	30,058,725	A	C	0		false	0.47879	60.859	dELS	518,099	dELS_12
1	30,088,741	C	T	0		false	0.38319	59.246	dELS	488,083	dELS_12
1	30,723,697	C	A	0		false	0.018734	15.679	pELS	111	pELS_1
1	30,728,493	G	A	0		false	0.26469	47.921	dELS	4,907	dELS_3
1	30,815,496	C	T	0		false	0.051359	25.495	non_coding_transcript_exon_variant	57,721	non_coding_transcript_exon_variant_3
1	30,847,534	G	T	0		false	0.46217	37.401	dELS	31,205	dELS_21
1	31,475,553	G	C	0		false	0.35345	269.43	intergenic_variant	61,739	intergenic_variant_7
1	31,475,858	A	G	0		false	0.35329	269.25	intergenic_variant	62,044	intergenic_variant_7
1	31,476,282	A	G	0		false	0.35308	269	intergenic_variant	62,468	intergenic_variant_7
1	31,480,571	C	T	0		false	0.35341	268.67	intergenic_variant	66,757	intergenic_variant_7
1	31,481,402	C	T	0		false	0.35101	268.63	intergenic_variant	67,588	intergenic_variant_7
1	31,484,990	A	G	0		false	0.35114	269.03	intergenic_variant	71,176	intergenic_variant_7
1	31,680,824	C	T	0.001342		false	0.42435	99.536	dELS	2,923	dELS_26
1	31,737,617	C	A	0.000573		false	0.091705	70.863	dELS	19,183	dELS_14
1	32,173,456	G	C	0		false	0.22454	49.713	3_prime_UTR_variant	6,218	3_prime_UTR_variant_1
1	32,816,791	G	A	0		false	0.1259	81.896	5_prime_UTR_variant	23	5_prime_UTR_variant_2
1	33,177,053	A	G	0		false	0.021754	84.46	PLS_flank	502	PLS_flank_0
1	33,177,055	A	G	0		false	0.022654	81.675	PLS_flank	504	PLS_flank_0
1	33,177,187	C	T	0		false	0.021412	84.921	PLS_flank	636	PLS_flank_0
1	33,430,396	C	A	0		false	0.016696	37.51	5_prime_UTR_variant	249	5_prime_UTR_variant_1
1	33,448,732	T	G	0.904272	Urea	true	0.32908	132.75	intergenic_variant	17,636	intergenic_variant_1
1	33,579,576	G	A	0		false	0.23795	31.568	dELS	6,985	dELS_1
1	34,328,690	C	G	0		false	0.041854	21.076	dELS	151,782	dELS_28
1	34,743,097	C	T	0		false	0.37482	38.179	dELS_flank	11,949	dELS_flank_3
1	34,758,312	A	C	0		false	0.047057	21.346	3_prime_UTR_variant	1,427	3_prime_UTR_variant_3
1	34,762,072	A	G	0		false	0.038883	18.538	3_prime_UTR_variant	2,331	3_prime_UTR_variant_3
1	34,855,089	T	G	0		false	0.046064	16.543	3_prime_UTR_variant	3,955	3_prime_UTR_variant_3
1	34,859,812	C	T	0		false	0.45328	35.638	PLS	56	PLS_4
1	36,083,895	C	T	0		false	0.070841	29.75	PLS	198	PLS_2
1	36,251,088	A	G	0		false	0.007396	16.123	dELS_flank	26,644	dELS_flank_13
1	36,251,547	C	T	0		false	0.0074	16.105	dELS_flank	27,103	dELS_flank_13
1	36,415,228	G	A	0.000715		false	0.35303	84.323	dELS_flank	6,952	dELS_flank_8
1	36,478,315	C	G	1	Baso,WBC	true	0.42344	63.613	intron_variant	1,203	intron_variant_1
1	37,596,105	G	C	0		false	0.40198	136.43	PLS	167	PLS_3
1	37,612,628	A	G	0		false	0.47106	121.29	3_prime_UTR_variant	16,690	3_prime_UTR_variant_0
1	37,678,596	G	T	0		false	0.38362	41.893	dELS_flank	11,907	dELS_flank_3
1	37,729,910	A	G	0		false	0.21792	81.084	dELS	23,058	dELS_25
1	37,730,354	G	A	0		false	0.21774	81.03	dELS	22,614	dELS_25
1	38,137,641	G	A	0		false	0.014937	13.612	intron_variant	90,847	intron_variant_3
1	39,196,982	C	T	0		false	0.23735	96.818	dELS	7,712	dELS_2
1	39,570,256	G	T	0.973962	CRP	true	0.19719	291.83	dELS_flank	1,390	dELS_flank_2
1	39,590,220	A	G	0		false	0.04296	50.281	dELS_flank	13,429	dELS_flank_11
1	39,693,986	C	T	0.002807		false	0.13174	47.276	dELS_flank	1,803	dELS_flank_10
1	40,340,102	A	G	0		false	0.14965	55.028	dELS	4,747	dELS_18
1	40,391,858	A	C	0		false	0.44047	67.355	pELS	1,486	pELS_2
1	40,450,262	C	G	0		false	0.01033	26.897	PLS	154	PLS_0
1	40,712,211	A	G	0		false	0.026133	83.787	dELS_flank	2,667	dELS_flank_1
1	40,820,681	G	A	0.001672		false	0.45973	44.412	dELS	3,415	dELS_24
1	40,834,649	C	T	0		false	0.001467	6.8113	intron_variant	17,383	intron_variant_2
1	40,835,347	T	C	0		false	0.4799	26.55	dELS	18,081	dELS_9
1	40,835,362	G	C	0		false	0.14877	22.337	dELS	18,096	dELS_16
1	40,850,007	C	T	0		false	0.21752	22.602	dELS	12,355	dELS_6
1	40,850,195	A	C	0.000691		false	0.48666	28.816	dELS	12,167	dELS_9
1	40,855,750	C	T	0		false	0.463	48.579	dELS	6,612	dELS_24
1	40,873,866	G	T	0.008062		false	0.1368	64.03	intron_variant	11,502	intron_variant_0
1	40,873,965	G	C	0.008729		false	0.13666	64.006	intron_variant	11,601	intron_variant_0
1	41,259,351	C	G	0		false	0.001202	6.8636	intron_variant	17,044	intron_variant_2
1	41,358,872	C	T	0		false	0.12664	136.18	dELS	3,058	dELS_11
1	41,359,374	T	C	0		false	0.12643	135.83	dELS	2,556	dELS_11
1	41,484,884	G	A	0		false	0.014836	29.672	PLS	200	PLS_0
1	41,497,351	A	T	0		false	0.0623	53.984	dELS	12,667	dELS_4
1	41,497,637	A	G	0		false	0.055586	52.569	dELS	12,953	dELS_4
1	41,498,043	G	T	0		false	0.055368	52.242	dELS	13,359	dELS_4
1	41,498,140	G	A	0		false	0.055466	52.554	dELS	13,456	dELS_4
1	41,521,432	C	T	0		false	0.018491	49.312	dELS	36,748	dELS_23
1	41,543,601	G	A	0		false	0.057217	31.829	non_coding_transcript_exon_variant	58,917	non_coding_transcript_exon_variant_3
1	41,646,565	T	C	0.002067		false	0.34482	162.46	intron_variant	15,759	intron_variant_12
1	42,463,786	G	A	0		false	0.017294	55.071	5_prime_UTR_variant	259	5_prime_UTR_variant_1
1	42,939,042	T	C	0		false	0.21245	109.76	dELS	4,195	dELS_19
1	42,939,793	C	T	0		false	0.21229	110.15	dELS	3,444	dELS_19
1	42,939,875	C	T	0		false	0.21228	110.18	dELS	3,362	dELS_19
1	42,970,380	G	A	0.999461	Ca	true	0.40667	100.89	non_coding_transcript_exon_variant	11,511	non_coding_transcript_exon_variant_2
1	42,989,839	T	C	0.000665		false	0.037423	67.074	pELS	30,970	pELS_5
1	43,147,125	G	A	0		false	0.018279	89.443	PLS_flank	778	PLS_flank_0
1	43,530,749	T	A	0		false	0.015487	30.389	PLS	126	PLS_0
1	43,887,565	G	A	0		false	0.20488	288.26	dELS_flank	6,819	dELS_flank_2
1	43,966,182	C	A	0		false	0.00004	39.224	5_prime_UTR_variant	242	5_prime_UTR_variant_1
1	43,980,506	C	A	0		false	0.001685	9.1329	5_prime_UTR_variant	569	5_prime_UTR_variant_3
1	44,031,577	T	C	0.992081	MCH,MCV	true	0.3192	98.234	PLS	114	PLS_1
1	44,425,816	C	T	0.000945		false	0.22147	76.36	dELS	20,527	dELS_25
1	44,613,482	C	T	0		false	0.04403	48.86	dELS_flank	12,843	dELS_flank_11
1	44,614,727	A	G	0		false	0.04459	48.741	dELS_flank	11,598	dELS_flank_11
1	44,788,128	C	T	0		false	0.000043	143.25	5_prime_UTR_variant	41	5_prime_UTR_variant_4
1	44,842,945	G	C	0		false	0.000042	153.54	5_prime_UTR_variant	0	5_prime_UTR_variant_4
1	45,106,987	G	A	0		false	0.022773	87.821	dELS	94,079	dELS_22
1	46,202,680	G	A	0		false	0.017261	88.629	PLS_flank	557	PLS_flank_0
1	46,599,754	T	C	0		false	0.23024	98.657	dELS	4,459	dELS_2
1	46,614,533	T	C	0		false	0.003226	16.918	5_prime_UTR_variant	599	5_prime_UTR_variant_3
1	46,615,894	A	C	0		false	0.000838	9.8061	5_prime_UTR_variant	570	5_prime_UTR_variant_3
1	46,633,563	A	C	0		false	0.48618	156.49	3_prime_UTR_variant	11,692	3_prime_UTR_variant_0
1	47,153,138	C	T	0		false	0.068364	130.45	intron_variant	15,682	intron_variant_11
1	48,222,704	A	G	0.00241		false	0.10793	117.57	5_prime_UTR_variant	11	5_prime_UTR_variant_0
1	48,501,635	G	A	0		false	0.005876	24.181	dELS_flank	29,426	dELS_flank_6
1	48,550,328	G	A	0		false	0.077695	43.238	intron_variant	78,119	intron_variant_10
1	48,550,452	T	C	0		false	0.077704	43.185	intron_variant	78,243	intron_variant_10
1	50,067,414	T	C	0		false	0.049883	45.136	non_coding_transcript_exon_variant	19,399	non_coding_transcript_exon_variant_1
1	50,418,558	G	C	0		false	0.09437	72.932	3_prime_UTR_variant	3,073	3_prime_UTR_variant_2
1	50,921,296	T	C	0		false	0.009178	26.654	intron_variant	38,970	intron_variant_9
1	51,268,264	T	C	0		false	0.008951	45.71	dELS	28,595	dELS_20
1	51,656,235	A	T	0		false	0.15399	139.81	intron_variant	39,125	intron_variant_5

Subsets and Splits