|
"""This section describes unitxt loaders. |
|
|
|
Loaders: Generators of Unitxt Multistreams from existing date sources |
|
===================================================================== |
|
|
|
Unitxt is all about readily preparing of any given data source for feeding into any given language model, and then, |
|
post-processing the model's output, preparing it for any given evaluator. |
|
|
|
Through that journey, the data advances in the form of Unitxt Multistream, undergoing a sequential application |
|
of various off-the-shelf operators (i.e., picked from Unitxt catalog), or operators easily implemented by inheriting. |
|
The journey starts by a Unitxt Loader bearing a Multistream from the given datasource. |
|
A loader, therefore, is the first item on any Unitxt Recipe. |
|
|
|
Unitxt catalog contains several loaders for the most popular datasource formats. |
|
All these loaders inherit from Loader, and hence, implementing a loader to expand over a new type of datasource is |
|
straightforward. |
|
|
|
Available Loaders Overview: |
|
- :class:`LoadHF <unitxt.loaders.LoadHF>` - Loads data from HuggingFace Datasets. |
|
- :class:`LoadCSV <unitxt.loaders.LoadCSV>` - Imports data from CSV (Comma-Separated Values) files. |
|
- :class:`LoadFromKaggle <unitxt.loaders.LoadFromKaggle>` - Retrieves datasets from the Kaggle community site. |
|
- :class:`LoadFromIBMCloud <unitxt.loaders.LoadFromIBMCloud>` - Fetches datasets hosted on IBM Cloud. |
|
- :class:`LoadFromSklearn <unitxt.loaders.LoadFromSklearn>` - Loads datasets available through the sklearn library. |
|
- :class:`MultipleSourceLoader <unitxt.loaders.MultipleSourceLoader>` - Combines data from multiple different sources. |
|
- :class:`LoadFromDictionary <unitxt.loaders.LoadFromDictionary>` - Loads data from a user-defined Python dictionary. |
|
- :class:`LoadFromHFSpace <unitxt.loaders.LoadFromHFSpace>` - Downloads and loads data from HuggingFace Spaces. |
|
|
|
|
|
|
|
|
|
------------------------ |
|
""" |
|
|
|
import fnmatch |
|
import itertools |
|
import json |
|
import os |
|
import tempfile |
|
import time |
|
from abc import abstractmethod |
|
from pathlib import Path |
|
from tempfile import TemporaryDirectory |
|
from typing import ( |
|
Any, |
|
Dict, |
|
Generator, |
|
Iterable, |
|
List, |
|
Literal, |
|
Mapping, |
|
Optional, |
|
Sequence, |
|
Union, |
|
) |
|
|
|
import pandas as pd |
|
import requests |
|
from datasets import ( |
|
DatasetDict, |
|
DownloadConfig, |
|
IterableDataset, |
|
IterableDatasetDict, |
|
get_dataset_split_names, |
|
) |
|
from datasets import load_dataset as _hf_load_dataset |
|
from huggingface_hub import HfApi |
|
from tqdm import tqdm |
|
|
|
from .dataclass import NonPositionalField |
|
from .error_utils import UnitxtError, UnitxtWarning |
|
from .fusion import FixedFusion |
|
from .logging_utils import get_logger |
|
from .operator import SourceOperator |
|
from .operators import Set |
|
from .settings_utils import get_settings |
|
from .stream import DynamicStream, MultiStream |
|
from .type_utils import isoftype |
|
from .utils import LRUCache, recursive_copy |
|
|
|
logger = get_logger() |
|
settings = get_settings() |
|
|
|
def hf_load_dataset(path: str, *args, **kwargs): |
|
if settings.hf_offline_datasets_path is not None: |
|
path = os.path.join(settings.hf_offline_datasets_path, path) |
|
return _hf_load_dataset( |
|
path, |
|
*args, **kwargs, |
|
download_config=DownloadConfig( |
|
max_retries=settings.loaders_max_retries, |
|
), |
|
verification_mode="no_checks", |
|
trust_remote_code=settings.allow_unverified_code, |
|
download_mode= "force_redownload" if settings.disable_hf_datasets_cache else "reuse_dataset_if_exists" |
|
) |
|
|
|
class Loader(SourceOperator): |
|
"""A base class for all loaders. |
|
|
|
A loader is the first component in the Unitxt Recipe, |
|
responsible for loading data from various sources and preparing it as a MultiStream for processing. |
|
The loader_limit is an optional parameter used to control the maximum number of instances to load from the data source. It is applied for each split separately. |
|
It is usually provided to the loader via the recipe (see standard.py) |
|
The loader can use this value to limit the amount of data downloaded from the source |
|
to reduce loading time. However, this may not always be possible, so the |
|
loader may ignore this. In any case, the recipe, will limit the number of instances in the returned |
|
stream, after load is complete. |
|
|
|
Args: |
|
loader_limit: Optional integer to specify a limit on the number of records to load. |
|
streaming: Bool indicating if streaming should be used. |
|
num_proc: Optional integer to specify the number of processes to use for parallel dataset loading. Adjust the value according to the number of CPU cores available and the specific needs of your processing task. |
|
""" |
|
|
|
loader_limit: int = None |
|
streaming: bool = False |
|
num_proc: int = None |
|
|
|
|
|
_loader_cache = LRUCache(max_size=settings.loader_cache_size) |
|
|
|
def get_limit(self) -> int: |
|
if settings.global_loader_limit is not None and self.loader_limit is not None: |
|
return min(int(settings.global_loader_limit), self.loader_limit) |
|
if settings.global_loader_limit is not None: |
|
return int(settings.global_loader_limit) |
|
return self.loader_limit |
|
|
|
def get_limiter(self): |
|
if settings.global_loader_limit is not None and self.loader_limit is not None: |
|
if int(settings.global_loader_limit) > self.loader_limit: |
|
return f"{self.__class__.__name__}.loader_limit" |
|
return "unitxt.settings.global_loader_limit" |
|
if settings.global_loader_limit is not None: |
|
return "unitxt.settings.global_loader_limit" |
|
return f"{self.__class__.__name__}.loader_limit" |
|
|
|
def log_limited_loading(self): |
|
if not hasattr(self, "_already_logged_limited_loading") or not self._already_logged_limited_loading: |
|
self._already_logged_limited_loading = True |
|
logger.info( |
|
f"\nLoading limited to {self.get_limit()} instances by setting {self.get_limiter()};" |
|
) |
|
|
|
def add_data_classification(self, multi_stream: MultiStream) -> MultiStream: |
|
if self.data_classification_policy is None: |
|
get_logger().warning( |
|
f"The {self.get_pretty_print_name()} loader does not set the `data_classification_policy`. " |
|
f"This may lead to sending of undesired data to external services.\n" |
|
f"Set it to a list of classification identifiers. \n" |
|
f"For example:\n" |
|
f"data_classification_policy = ['public']\n" |
|
f" or \n" |
|
f"data_classification_policy =['confidential','pii'])\n" |
|
) |
|
|
|
operator = Set( |
|
fields={"data_classification_policy": self.data_classification_policy} |
|
) |
|
return operator(multi_stream) |
|
|
|
def set_default_data_classification( |
|
self, default_data_classification_policy, additional_info |
|
): |
|
if self.data_classification_policy is None: |
|
if additional_info is not None: |
|
logger.info( |
|
f"{self.get_pretty_print_name()} sets 'data_classification_policy' to " |
|
f"{default_data_classification_policy} by default {additional_info}.\n" |
|
"To use a different value or remove this message, explicitly set the " |
|
"`data_classification_policy` attribute of the loader.\n" |
|
) |
|
self.data_classification_policy = default_data_classification_policy |
|
|
|
@abstractmethod |
|
def load_iterables(self) -> Dict[str, Iterable]: |
|
pass |
|
|
|
def _maybe_set_classification_policy(self): |
|
pass |
|
|
|
def load_data(self) -> MultiStream: |
|
try: |
|
iterables = self.load_iterables() |
|
except Exception as e: |
|
raise UnitxtError(f"Error in loader:\n{self}") from e |
|
if isoftype(iterables, MultiStream): |
|
return iterables |
|
return MultiStream.from_iterables(iterables, copying=True) |
|
|
|
def process(self) -> MultiStream: |
|
self._maybe_set_classification_policy() |
|
return self.add_data_classification(self.load_data()) |
|
|
|
def get_splits(self): |
|
return list(self().keys()) |
|
|
|
|
|
class LazyLoader(Loader): |
|
split: Optional[str] = NonPositionalField(default=None) |
|
|
|
@abstractmethod |
|
def get_splits(self) -> List[str]: |
|
pass |
|
|
|
@abstractmethod |
|
def split_generator(self, split: str) -> Generator: |
|
pass |
|
|
|
def load_iterables(self) -> Union[Dict[str, DynamicStream], IterableDatasetDict]: |
|
if self.split is not None: |
|
splits = [self.split] |
|
else: |
|
splits = self.get_splits() |
|
|
|
return MultiStream({ |
|
split: DynamicStream(self.split_generator, gen_kwargs={"split": split}) |
|
for split in splits |
|
}) |
|
|
|
|
|
class LoadHF(LazyLoader): |
|
"""Loads datasets from the HuggingFace Hub. |
|
|
|
It supports loading with or without streaming, |
|
and it can filter datasets upon loading. |
|
|
|
Args: |
|
path: |
|
The path or identifier of the dataset on the HuggingFace Hub. |
|
name: |
|
An optional dataset name. |
|
data_dir: |
|
Optional directory to store downloaded data. |
|
split: |
|
Optional specification of which split to load. |
|
data_files: |
|
Optional specification of particular data files to load. |
|
revision: |
|
Optional. The revision of the dataset. Often the commit id. Use in case you want to set the dataset version. |
|
streaming (bool): |
|
indicating if streaming should be used. |
|
filtering_lambda (str, optional): |
|
A lambda function for filtering the data after loading. |
|
num_proc (int, optional): |
|
Specifies the number of processes to use for parallel dataset loading. |
|
|
|
Example: |
|
Loading glue's mrpc dataset |
|
|
|
.. code-block:: python |
|
|
|
load_hf = LoadHF(path='glue', name='mrpc') |
|
""" |
|
|
|
path: str |
|
name: Optional[str] = None |
|
data_dir: Optional[str] = None |
|
split: Optional[str] = None |
|
data_files: Optional[ |
|
Union[str, Sequence[str], Mapping[str, Union[str, Sequence[str]]]] |
|
] = None |
|
revision: Optional[str] = None |
|
streaming: bool = None |
|
filtering_lambda: Optional[str] = None |
|
num_proc: Optional[int] = None |
|
splits: Optional[List[str]] = None |
|
|
|
def filter_load(self, dataset: DatasetDict): |
|
if not settings.allow_unverified_code: |
|
raise ValueError( |
|
f"{self.__class__.__name__} cannot run use filtering_lambda expression without setting unitxt.settings.allow_unverified_code=True or by setting environment variable: UNITXT_ALLOW_UNVERIFIED_CODE=True." |
|
) |
|
logger.info(f"\nLoading filtered by: {self.filtering_lambda};") |
|
return dataset.filter(eval(self.filtering_lambda)) |
|
|
|
def is_streaming(self) -> bool: |
|
if self.streaming is None: |
|
return settings.stream_hf_datasets_by_default |
|
return self.streaming |
|
|
|
|
|
def load_dataset( |
|
self, split: str, streaming=None, disable_memory_caching=False |
|
) -> Union[IterableDatasetDict, IterableDataset]: |
|
dataset_id = str(self) + "_" + str(split) |
|
dataset = self.__class__._loader_cache.get(dataset_id, None) |
|
if dataset is None: |
|
if streaming is None: |
|
streaming = self.is_streaming() |
|
try: |
|
dataset = hf_load_dataset( |
|
self.path, |
|
name=self.name, |
|
data_dir=self.data_dir, |
|
data_files=self.data_files, |
|
revision=self.revision, |
|
streaming=streaming, |
|
split=split, |
|
num_proc=self.num_proc, |
|
) |
|
except ValueError as e: |
|
if "trust_remote_code" in str(e): |
|
raise ValueError( |
|
f"{self.__class__.__name__} cannot run remote code from huggingface without setting unitxt.settings.allow_unverified_code=True or by setting environment variable: UNITXT_ALLOW_UNVERIFIED_CODE." |
|
) from e |
|
self.__class__._loader_cache.max_size = settings.loader_cache_size |
|
if not disable_memory_caching: |
|
self.__class__._loader_cache[dataset_id] = dataset |
|
return self.__class__._loader_cache[dataset_id] |
|
|
|
def _maybe_set_classification_policy(self): |
|
if os.path.exists(self.path): |
|
self.set_default_data_classification( |
|
["proprietary"], "when loading from local files" |
|
) |
|
else: |
|
self.set_default_data_classification( |
|
["public"], |
|
None, |
|
) |
|
|
|
def get_splits(self): |
|
if self.splits is not None: |
|
return self.splits |
|
try: |
|
return get_dataset_split_names( |
|
path=self.path, |
|
config_name=self.name, |
|
trust_remote_code=settings.allow_unverified_code, |
|
download_config=DownloadConfig( |
|
max_retries=settings.loaders_max_retries, |
|
extract_on_the_fly=True, |
|
), |
|
) |
|
except: |
|
UnitxtWarning( |
|
f'LoadHF(path="{self.path}", name="{self.name}") could not retrieve split names without loading the dataset. Consider defining "splits" in the LoadHF definition to improve loading time.' |
|
) |
|
try: |
|
dataset = self.load_dataset( |
|
split=None, disable_memory_caching=True, streaming=True |
|
) |
|
except ( |
|
NotImplementedError |
|
): |
|
dataset = self.load_dataset(split=None, streaming=False) |
|
return list(dataset.keys()) |
|
|
|
def split_generator(self, split: str) -> Generator: |
|
if self.get_limit() is not None: |
|
self.log_limited_loading() |
|
try: |
|
dataset = self.load_dataset(split=split) |
|
except ( |
|
NotImplementedError |
|
): |
|
dataset = self.load_dataset(split=split, streaming=False) |
|
|
|
if self.filtering_lambda is not None: |
|
dataset = self.filter_load(dataset) |
|
|
|
limit = self.get_limit() |
|
if limit is None: |
|
yield from dataset |
|
else: |
|
for i, instance in enumerate(dataset): |
|
yield instance |
|
if i + 1 >= limit: |
|
break |
|
|
|
|
|
class LoadCSV(LazyLoader): |
|
"""Loads data from CSV files. |
|
|
|
Supports streaming and can handle large files by loading them in chunks. |
|
|
|
Args: |
|
files (Dict[str, str]): A dictionary mapping names to file paths. |
|
chunksize : Size of the chunks to load at a time. |
|
loader_limit: Optional integer to specify a limit on the number of records to load. |
|
streaming: Bool indicating if streaming should be used. |
|
sep: String specifying the separator used in the CSV files. |
|
|
|
Example: |
|
Loading csv |
|
|
|
.. code-block:: python |
|
|
|
load_csv = LoadCSV(files={'train': 'path/to/train.csv'}, chunksize=100) |
|
""" |
|
|
|
files: Dict[str, str] |
|
chunksize: int = 1000 |
|
loader_limit: Optional[int] = None |
|
streaming: bool = True |
|
sep: str = "," |
|
compression: Optional[str] = None |
|
lines: Optional[bool] = None |
|
file_type: Literal["csv", "json"] = "csv" |
|
|
|
def _maybe_set_classification_policy(self): |
|
self.set_default_data_classification( |
|
["proprietary"], "when loading from local files" |
|
) |
|
|
|
def get_reader(self): |
|
if self.file_type == "csv": |
|
return pd.read_csv |
|
if self.file_type == "json": |
|
return pd.read_json |
|
raise ValueError() |
|
|
|
def get_args(self): |
|
args = {} |
|
if self.file_type == "csv": |
|
args["sep"] = self.sep |
|
args["low_memory"] = self.streaming |
|
if self.compression is not None: |
|
args["compression"] = self.compression |
|
if self.lines is not None: |
|
args["lines"] = self.lines |
|
if self.get_limit() is not None: |
|
args["nrows"] = self.get_limit() |
|
return args |
|
|
|
def get_splits(self) -> List[str]: |
|
return list(self.files.keys()) |
|
|
|
def split_generator(self, split: str) -> Generator: |
|
dataset_id = str(self) + "_" + split |
|
dataset = self.__class__._loader_cache.get(dataset_id, None) |
|
if dataset is None: |
|
if self.get_limit() is not None: |
|
self.log_limited_loading() |
|
for attempt in range(settings.loaders_max_retries): |
|
try: |
|
reader = self.get_reader() |
|
if self.get_limit() is not None: |
|
self.log_limited_loading() |
|
|
|
try: |
|
dataset = reader(self.files[split], **self.get_args()).to_dict( |
|
"records" |
|
) |
|
except ValueError: |
|
import fsspec |
|
|
|
with fsspec.open(self.files[split], mode="rt") as f: |
|
dataset = reader(f, **self.get_args()).to_dict("records") |
|
except Exception as e: |
|
logger.debug(f"Attempt csv load {attempt + 1} failed: {e}") |
|
if attempt < settings.loaders_max_retries - 1: |
|
time.sleep(2) |
|
else: |
|
raise e |
|
self.__class__._loader_cache.max_size = settings.loader_cache_size |
|
self.__class__._loader_cache[dataset_id] = dataset |
|
|
|
for instance in self.__class__._loader_cache[dataset_id]: |
|
yield recursive_copy(instance) |
|
|
|
|
|
class LoadFromSklearn(LazyLoader): |
|
"""Loads datasets from the sklearn library. |
|
|
|
This loader does not support streaming and is intended for use with sklearn's dataset fetch functions. |
|
|
|
Args: |
|
dataset_name: The name of the sklearn dataset to fetch. |
|
splits: A list of data splits to load, e.g., ['train', 'test']. |
|
|
|
Example: |
|
Loading form sklearn |
|
|
|
.. code-block:: python |
|
|
|
load_sklearn = LoadFromSklearn(dataset_name='iris', splits=['train', 'test']) |
|
""" |
|
|
|
dataset_name: str |
|
splits: List[str] = ["train", "test"] |
|
|
|
_requirements_list: List[str] = ["scikit-learn", "pandas"] |
|
|
|
data_classification_policy = ["public"] |
|
|
|
def verify(self): |
|
super().verify() |
|
|
|
if self.streaming: |
|
raise NotImplementedError("LoadFromSklearn cannot load with streaming.") |
|
|
|
def prepare(self): |
|
super().prepare() |
|
from sklearn import datasets as sklearn_datatasets |
|
|
|
self.downloader = getattr(sklearn_datatasets, f"fetch_{self.dataset_name}") |
|
|
|
def get_splits(self): |
|
return self.splits |
|
|
|
def split_generator(self, split: str) -> Generator: |
|
dataset_id = str(self) + "_" + split |
|
dataset = self.__class__._loader_cache.get(dataset_id, None) |
|
if dataset is None: |
|
split_data = self.downloader(subset=split) |
|
targets = [split_data["target_names"][t] for t in split_data["target"]] |
|
df = pd.DataFrame([split_data["data"], targets]).T |
|
df.columns = ["data", "target"] |
|
dataset = df.to_dict("records") |
|
self.__class__._loader_cache.max_size = settings.loader_cache_size |
|
self.__class__._loader_cache[dataset_id] = dataset |
|
for instance in self.__class__._loader_cache[dataset_id]: |
|
yield recursive_copy(instance) |
|
|
|
|
|
class MissingKaggleCredentialsError(ValueError): |
|
pass |
|
|
|
|
|
class LoadFromKaggle(Loader): |
|
"""Loads datasets from Kaggle. |
|
|
|
Requires Kaggle API credentials and does not support streaming. |
|
|
|
Args: |
|
url: URL to the Kaggle dataset. |
|
|
|
Example: |
|
Loading from kaggle |
|
|
|
.. code-block:: python |
|
|
|
load_kaggle = LoadFromKaggle(url='kaggle.com/dataset/example') |
|
""" |
|
|
|
url: str |
|
|
|
_requirements_list: List[str] = ["opendatasets"] |
|
data_classification_policy = ["public"] |
|
|
|
def verify(self): |
|
super().verify() |
|
if not os.path.isfile("kaggle.json"): |
|
raise MissingKaggleCredentialsError( |
|
"Please obtain kaggle credentials https://christianjmills.com/posts/kaggle-obtain-api-key-tutorial/ and save them to local ./kaggle.json file" |
|
) |
|
|
|
if self.streaming: |
|
raise NotImplementedError("LoadFromKaggle cannot load with streaming.") |
|
|
|
def prepare(self): |
|
super().prepare() |
|
from opendatasets import download |
|
|
|
self.downloader = download |
|
|
|
def load_iterables(self): |
|
with TemporaryDirectory() as temp_directory: |
|
self.downloader(self.url, temp_directory) |
|
return hf_load_dataset(temp_directory, streaming=False) |
|
|
|
|
|
class LoadFromIBMCloud(Loader): |
|
"""Loads data from IBM Cloud Object Storage. |
|
|
|
Does not support streaming and requires AWS-style access keys. |
|
data_dir Can be either: |
|
1. a list of file names, the split of each file is determined by the file name pattern |
|
2. Mapping: split -> file_name, e.g. {"test" : "test.json", "train": "train.json"} |
|
3. Mapping: split -> file_names, e.g. {"test" : ["test1.json", "test2.json"], "train": ["train.json"]} |
|
|
|
Args: |
|
endpoint_url_env: |
|
Environment variable name for the IBM Cloud endpoint URL. |
|
aws_access_key_id_env: |
|
Environment variable name for the AWS access key ID. |
|
aws_secret_access_key_env: |
|
Environment variable name for the AWS secret access key. |
|
bucket_name: |
|
Name of the S3 bucket from which to load data. |
|
data_dir: |
|
Optional directory path within the bucket. |
|
data_files: |
|
Union type allowing either a list of file names or a mapping of splits to file names. |
|
data_field: |
|
The dataset key for nested JSON file, i.e. when multiple datasets are nested in the same file |
|
caching (bool): |
|
indicating if caching is enabled to avoid re-downloading data. |
|
|
|
Example: |
|
Loading from IBM Cloud |
|
|
|
.. code-block:: python |
|
|
|
load_ibm_cloud = LoadFromIBMCloud( |
|
endpoint_url_env='IBM_CLOUD_ENDPOINT', |
|
aws_access_key_id_env='IBM_AWS_ACCESS_KEY_ID', |
|
aws_secret_access_key_env='IBM_AWS_SECRET_ACCESS_KEY', |
|
bucket_name='my-bucket' |
|
) |
|
multi_stream = load_ibm_cloud.process() |
|
""" |
|
|
|
endpoint_url_env: str |
|
aws_access_key_id_env: str |
|
aws_secret_access_key_env: str |
|
bucket_name: str |
|
data_dir: str = None |
|
|
|
data_files: Union[Sequence[str], Mapping[str, Union[str, Sequence[str]]]] |
|
data_field: str = None |
|
caching: bool = True |
|
data_classification_policy = ["proprietary"] |
|
|
|
_requirements_list: List[str] = ["ibm-cos-sdk"] |
|
|
|
def _download_from_cos(self, cos, bucket_name, item_name, local_file): |
|
logger.info(f"Downloading {item_name} from {bucket_name} COS") |
|
try: |
|
response = cos.Object(bucket_name, item_name).get() |
|
size = response["ContentLength"] |
|
body = response["Body"] |
|
except Exception as e: |
|
raise Exception( |
|
f"Unabled to access {item_name} in {bucket_name} in COS", e |
|
) from e |
|
|
|
if self.get_limit() is not None: |
|
if item_name.endswith(".jsonl"): |
|
first_lines = list( |
|
itertools.islice(body.iter_lines(), self.get_limit()) |
|
) |
|
with open(local_file, "wb") as downloaded_file: |
|
for line in first_lines: |
|
downloaded_file.write(line) |
|
downloaded_file.write(b"\n") |
|
logger.info( |
|
f"\nDownload successful limited to {self.get_limit()} lines" |
|
) |
|
return |
|
|
|
progress_bar = tqdm(total=size, unit="iB", unit_scale=True) |
|
|
|
def upload_progress(chunk): |
|
progress_bar.update(chunk) |
|
|
|
try: |
|
cos.Bucket(bucket_name).download_file( |
|
item_name, local_file, Callback=upload_progress |
|
) |
|
logger.info("\nDownload Successful") |
|
except Exception as e: |
|
raise Exception( |
|
f"Unabled to download {item_name} in {bucket_name}", e |
|
) from e |
|
|
|
def prepare(self): |
|
super().prepare() |
|
self.endpoint_url = os.getenv(self.endpoint_url_env) |
|
self.aws_access_key_id = os.getenv(self.aws_access_key_id_env) |
|
self.aws_secret_access_key = os.getenv(self.aws_secret_access_key_env) |
|
root_dir = os.getenv("UNITXT_IBM_COS_CACHE", None) or os.getcwd() |
|
self.cache_dir = os.path.join(root_dir, "ibmcos_datasets") |
|
|
|
if not os.path.exists(self.cache_dir): |
|
Path(self.cache_dir).mkdir(parents=True, exist_ok=True) |
|
self.verified = False |
|
|
|
def lazy_verify(self): |
|
super().verify() |
|
assert ( |
|
self.endpoint_url is not None |
|
), f"Please set the {self.endpoint_url_env} environmental variable" |
|
assert ( |
|
self.aws_access_key_id is not None |
|
), f"Please set {self.aws_access_key_id_env} environmental variable" |
|
assert ( |
|
self.aws_secret_access_key is not None |
|
), f"Please set {self.aws_secret_access_key_env} environmental variable" |
|
if self.streaming: |
|
raise NotImplementedError("LoadFromKaggle cannot load with streaming.") |
|
|
|
def _maybe_set_classification_policy(self): |
|
self.set_default_data_classification( |
|
["proprietary"], "when loading from IBM COS" |
|
) |
|
|
|
def load_iterables(self): |
|
if not self.verified: |
|
self.lazy_verify() |
|
self.verified = True |
|
import ibm_boto3 |
|
|
|
cos = ibm_boto3.resource( |
|
"s3", |
|
aws_access_key_id=self.aws_access_key_id, |
|
aws_secret_access_key=self.aws_secret_access_key, |
|
endpoint_url=self.endpoint_url, |
|
) |
|
local_dir = os.path.join( |
|
self.cache_dir, |
|
self.bucket_name, |
|
self.data_dir or "", |
|
f"loader_limit_{self.get_limit()}", |
|
) |
|
if not os.path.exists(local_dir): |
|
Path(local_dir).mkdir(parents=True, exist_ok=True) |
|
if isinstance(self.data_files, Mapping): |
|
data_files_names = list(self.data_files.values()) |
|
if not isinstance(data_files_names[0], str): |
|
data_files_names = list(itertools.chain(*data_files_names)) |
|
else: |
|
data_files_names = self.data_files |
|
|
|
for data_file in data_files_names: |
|
local_file = os.path.join(local_dir, data_file) |
|
if not self.caching or not os.path.exists(local_file): |
|
|
|
|
|
object_key = ( |
|
self.data_dir + "/" + data_file |
|
if self.data_dir is not None |
|
else data_file |
|
) |
|
with tempfile.NamedTemporaryFile() as temp_file: |
|
|
|
self._download_from_cos( |
|
cos, |
|
self.bucket_name, |
|
object_key, |
|
local_dir + "/" + os.path.basename(temp_file.name), |
|
) |
|
os.renames( |
|
local_dir + "/" + os.path.basename(temp_file.name), |
|
local_dir + "/" + data_file, |
|
) |
|
|
|
if isinstance(self.data_files, list): |
|
dataset = hf_load_dataset(local_dir, streaming=False, field=self.data_field) |
|
else: |
|
dataset = hf_load_dataset( |
|
local_dir, |
|
streaming=False, |
|
data_files=self.data_files, |
|
field=self.data_field, |
|
) |
|
|
|
return dataset |
|
|
|
|
|
class MultipleSourceLoader(LazyLoader): |
|
"""Allows loading data from multiple sources, potentially mixing different types of loaders. |
|
|
|
Args: |
|
sources: A list of loaders that will be combined to form a unified dataset. |
|
|
|
Examples: |
|
1) Loading the train split from a HuggingFace Hub and the test set from a local file: |
|
|
|
.. code-block:: python |
|
|
|
MultipleSourceLoader(sources = [ LoadHF(path="public/data",split="train"), LoadCSV({"test": "mytest.csv"}) ]) |
|
|
|
|
|
|
|
2) Loading a test set combined from two files |
|
|
|
.. code-block:: python |
|
|
|
MultipleSourceLoader(sources = [ LoadCSV({"test": "mytest1.csv"}, LoadCSV({"test": "mytest2.csv"}) ]) |
|
""" |
|
|
|
sources: List[Loader] |
|
|
|
def add_data_classification(self, multi_stream: MultiStream) -> MultiStream: |
|
if self.data_classification_policy is None: |
|
return multi_stream |
|
return super().add_data_classification(multi_stream) |
|
|
|
def get_splits(self): |
|
splits = [] |
|
for loader in self.sources: |
|
splits.extend(loader.get_splits()) |
|
return list(set(splits)) |
|
|
|
def split_generator(self, split: str) -> Generator[Any, None, None]: |
|
yield from FixedFusion( |
|
subsets=self.sources, |
|
max_instances_per_subset=self.get_limit(), |
|
include_splits=[split], |
|
)()[split] |
|
|
|
|
|
class LoadFromDictionary(Loader): |
|
"""Allows loading data from a dictionary of constants. |
|
|
|
The loader can be used, for example, when debugging or working with small datasets. |
|
|
|
Args: |
|
data (Dict[str, List[Dict[str, Any]]]): a dictionary of constants from which the data will be loaded |
|
|
|
Example: |
|
Loading dictionary |
|
|
|
.. code-block:: python |
|
|
|
data = { |
|
"train": [{"input": "SomeInput1", "output": "SomeResult1"}, |
|
{"input": "SomeInput2", "output": "SomeResult2"}], |
|
"test": [{"input": "SomeInput3", "output": "SomeResult3"}, |
|
{"input": "SomeInput4", "output": "SomeResult4"}] |
|
} |
|
loader = LoadFromDictionary(data=data) |
|
""" |
|
|
|
data: Dict[str, List[Dict[str, Any]]] |
|
|
|
def verify(self): |
|
super().verify() |
|
if not isoftype(self.data, Dict[str, List[Dict[str, Any]]]): |
|
raise ValueError( |
|
f"Passed data to LoadFromDictionary is not of type Dict[str, List[Dict[str, Any]]].\n" |
|
f"Expected data should map between split name and list of instances.\n" |
|
f"Received value: {self.data}\n" |
|
) |
|
for split in self.data.keys(): |
|
if len(self.data[split]) == 0: |
|
raise ValueError(f"Split {split} has no instances.") |
|
first_instance = self.data[split][0] |
|
for instance in self.data[split]: |
|
if instance.keys() != first_instance.keys(): |
|
raise ValueError( |
|
f"Not all instances in split '{split}' have the same fields.\n" |
|
f"instance {instance} has different fields different from {first_instance}" |
|
) |
|
|
|
def _maybe_set_classification_policy(self): |
|
self.set_default_data_classification( |
|
["proprietary"], "when loading from python dictionary" |
|
) |
|
|
|
def load_iterables(self) -> MultiStream: |
|
return self.data |
|
|
|
|
|
class LoadFromHFSpace(LazyLoader): |
|
"""Used to load data from HuggingFace Spaces lazily. |
|
|
|
Args: |
|
space_name (str): |
|
Name of the HuggingFace Space to be accessed. |
|
data_files (str | Sequence[str] | Mapping[str, str | Sequence[str]]): |
|
Relative paths to files within a given repository. If given as a mapping, |
|
paths should be values, while keys should represent the type of respective files |
|
(training, testing etc.). |
|
path (str, optional): |
|
Absolute path to a directory where data should be downloaded. |
|
revision (str, optional): |
|
ID of a Git branch or commit to be used. By default, it is set to None, |
|
thus data is downloaded from the main branch of the accessed repository. |
|
use_token (bool, optional): |
|
Whether a token is used for authentication when accessing |
|
the HuggingFace Space. If necessary, the token is read from the HuggingFace |
|
config folder. |
|
token_env (str, optional): |
|
Key of an env variable which value will be used for |
|
authentication when accessing the HuggingFace Space - if necessary. |
|
""" |
|
|
|
space_name: str |
|
data_files: Union[str, Sequence[str], Mapping[str, Union[str, Sequence[str]]]] |
|
path: Optional[str] = None |
|
revision: Optional[str] = None |
|
use_token: Optional[bool] = None |
|
token_env: Optional[str] = None |
|
requirements_list: List[str] = ["huggingface_hub"] |
|
|
|
streaming: bool = True |
|
|
|
def _get_token(self) -> Optional[Union[bool, str]]: |
|
if self.token_env: |
|
token = os.getenv(self.token_env) |
|
if not token: |
|
get_logger().warning( |
|
f"The 'token_env' parameter was specified as '{self.token_env}', " |
|
f"however, no environment variable under such a name was found. " |
|
f"Therefore, the loader will not use any tokens for authentication." |
|
) |
|
return token |
|
return self.use_token |
|
|
|
@staticmethod |
|
def _is_wildcard(path: str) -> bool: |
|
wildcard_characters = ["*", "?", "[", "]"] |
|
return any(char in path for char in wildcard_characters) |
|
|
|
|
|
|
|
def _get_repo_files(self): |
|
if not hasattr(self, "_repo_files") or self._repo_files is None: |
|
api = HfApi() |
|
self._repo_files = api.list_repo_files( |
|
self.space_name, repo_type="space", revision=self.revision |
|
) |
|
return self._repo_files |
|
|
|
def _get_sub_files(self, file: str) -> List[str]: |
|
if self._is_wildcard(file): |
|
return fnmatch.filter(self._get_repo_files(), file) |
|
return [file] |
|
|
|
|
|
def get_splits(self) -> List[str]: |
|
if isinstance(self.data_files, Mapping): |
|
return list(self.data_files.keys()) |
|
return ["train"] |
|
|
|
def split_generator(self, split: str) -> Generator: |
|
from huggingface_hub import hf_hub_download |
|
from huggingface_hub.utils import EntryNotFoundError, RepositoryNotFoundError |
|
|
|
token = self._get_token() |
|
files = self.data_files.get(split, self.data_files) if isinstance(self.data_files, Mapping) else self.data_files |
|
|
|
if isinstance(files, str): |
|
files = [files] |
|
limit = self.get_limit() |
|
|
|
if limit is not None: |
|
total = 0 |
|
self.log_limited_loading() |
|
|
|
for file in files: |
|
for sub_file in self._get_sub_files(file): |
|
try: |
|
file_path = hf_hub_download( |
|
repo_id=self.space_name, |
|
filename=sub_file, |
|
repo_type="space", |
|
token=token, |
|
revision=self.revision, |
|
local_dir=self.path, |
|
) |
|
except EntryNotFoundError as e: |
|
raise ValueError( |
|
f"The file '{file}' was not found in the space '{self.space_name}'. " |
|
f"Please check if the filename is correct, or if it exists in that " |
|
f"Huggingface space." |
|
) from e |
|
except RepositoryNotFoundError as e: |
|
raise ValueError( |
|
f"The Huggingface space '{self.space_name}' was not found. " |
|
f"Please check if the name is correct and you have access to the space." |
|
) from e |
|
|
|
with open(file_path, encoding="utf-8") as f: |
|
for line in f: |
|
yield json.loads(line.strip()) |
|
if limit is not None: |
|
total += 1 |
|
if total >= limit: |
|
return |
|
|
|
|
|
|
|
class LoadFromAPI(Loader): |
|
"""Loads data from from API. |
|
|
|
This loader is designed to fetch data from an API endpoint, |
|
handling authentication through an API key. It supports |
|
customizable chunk sizes and limits for data retrieval. |
|
|
|
Args: |
|
urls (Dict[str, str]): |
|
A dictionary mapping split names to their respective API URLs. |
|
chunksize (int, optional): |
|
The size of data chunks to fetch in each request. Defaults to 100,000. |
|
loader_limit (int, optional): |
|
Limits the number of records to load. Applied per split. Defaults to None. |
|
streaming (bool, optional): |
|
Determines if data should be streamed. Defaults to False. |
|
api_key_env_var (str, optional): |
|
The name of the environment variable holding the API key. |
|
Defaults to "SQL_API_KEY". |
|
headers (Dict[str, Any], optional): |
|
Additional headers to include in API requests. Defaults to None. |
|
data_field (str, optional): |
|
The name of the field in the API response that contains the data. |
|
Defaults to "data". |
|
method (str, optional): |
|
The HTTP method to use for API requests. Defaults to "GET". |
|
verify_cert (bool): |
|
Apply verification of the SSL certificate |
|
Defaults as True |
|
""" |
|
|
|
urls: Dict[str, str] |
|
chunksize: int = 100000 |
|
loader_limit: Optional[int] = None |
|
streaming: bool = False |
|
api_key_env_var: str = "SQL_API_KEY" |
|
headers: Optional[Dict[str, Any]] = None |
|
data_field: str = "data" |
|
method: str = "GET" |
|
verify_cert: bool = True |
|
|
|
|
|
_loader_cache = LRUCache(max_size=settings.loader_cache_size) |
|
|
|
def _maybe_set_classification_policy(self): |
|
self.set_default_data_classification(["proprietary"], "when loading from API") |
|
|
|
def load_iterables(self) -> Dict[str, Iterable]: |
|
api_key = os.getenv(self.api_key_env_var, None) |
|
if not api_key: |
|
raise ValueError( |
|
f"The environment variable '{self.api_key_env_var}' must be set to use the LoadFromAPI loader." |
|
) |
|
|
|
base_headers = { |
|
"Content-Type": "application/json", |
|
"accept": "application/json", |
|
"Authorization": f"Bearer {api_key}", |
|
} |
|
if self.headers: |
|
base_headers.update(self.headers) |
|
|
|
iterables = {} |
|
for split_name, url in self.urls.items(): |
|
if self.get_limit() is not None: |
|
self.log_limited_loading() |
|
|
|
if self.method == "GET": |
|
response = requests.get( |
|
url, |
|
headers=base_headers, |
|
verify=self.verify_cert, |
|
) |
|
elif self.method == "POST": |
|
response = requests.post( |
|
url, |
|
headers=base_headers, |
|
verify=self.verify_cert, |
|
json={}, |
|
) |
|
else: |
|
raise ValueError(f"Method {self.method} not supported") |
|
|
|
response.raise_for_status() |
|
|
|
data = json.loads(response.text) |
|
|
|
if self.data_field: |
|
if self.data_field not in data: |
|
raise ValueError( |
|
f"Data field '{self.data_field}' not found in API response." |
|
) |
|
data = data[self.data_field] |
|
|
|
if self.get_limit() is not None: |
|
data = data[: self.get_limit()] |
|
|
|
iterables[split_name] = data |
|
|
|
return iterables |
|
|
|
def process(self) -> MultiStream: |
|
self._maybe_set_classification_policy() |
|
iterables = self.__class__._loader_cache.get(str(self), None) |
|
if iterables is None: |
|
iterables = self.load_iterables() |
|
self.__class__._loader_cache.max_size = settings.loader_cache_size |
|
self.__class__._loader_cache[str(self)] = iterables |
|
return MultiStream.from_iterables(iterables, copying=True) |
|
|